메뉴 건너뛰기




Volumn 88, Issue 22, 2014, Pages 13352-13366

Hallmarks of hepatitis C virus in equine hepacivirus

Author keywords

[No Author keywords available]

Indexed keywords

CORE PROTEIN; FAT DROPLET; PEPTIDASE; SINGLE PEPTIDE PEPTIDASE; UNCLASSIFIED DRUG; VIRUS ANTIBODY; VIRUS RNA; HEPATITIS C ANTIBODY;

EID: 84908377015     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.02280-14     Document Type: Article
Times cited : (58)

References (55)
  • 2
    • 0035229417 scopus 로고    scopus 로고
    • GB virus B as a model for hepatitis C virus
    • Beames B, Chavez D, Lanford RE. 2001. GB virus B as a model for hepatitis C virus. ILAR J. 42:152-160. http://dx.doi.org/10.1093/ilar.42.2.152.
    • (2001) ILAR J. , vol.42 , pp. 152-160
    • Beames, B.1    Chavez, D.2    Lanford, R.E.3
  • 3
    • 0035208060 scopus 로고    scopus 로고
    • Host range studies of GB virus-B hepatitis agent, the closest relative of hepatitis C virus, in New World monkeys and chimpanzees
    • Bukh J, Apgar CL, Govindarajan S, Purcell RH. 2001. Host range studies of GB virus-B hepatitis agent, the closest relative of hepatitis C virus, in New World monkeys and chimpanzees. J. Med. Virol. 65:694-697. http://dx.doi.org/10.1002/jmv.2092.
    • (2001) J. Med. Virol. , vol.65 , pp. 694-697
    • Bukh, J.1    Apgar, C.L.2    Govindarajan, S.3    Purcell, R.H.4
  • 11
    • 0030273064 scopus 로고    scopus 로고
    • Hepatitis C virus core protein: carboxy-terminal boundaries of two processed species suggest cleavage by a signal peptide peptidase
    • Hüssy P, Langen H, Mous J, Jacobsen H. 1996. Hepatitis C virus core protein: carboxy-terminal boundaries of two processed species suggest cleavage by a signal peptide peptidase. Virology 224:93-104. http://dx.doi.org/10.1006/viro.1996.0510.
    • (1996) Virology , vol.224 , pp. 93-104
    • Hüssy, P.1    Langen, H.2    Mous, J.3    Jacobsen, H.4
  • 12
    • 33749406620 scopus 로고    scopus 로고
    • Signal peptide peptidase cleavage of GB virus B core protein is required for productive infection in vivo
    • Targett-Adams P, Schaller T, Hope G, Lanford RE, Lemon SM, Martin A, McLauchlan J. 2006. Signal peptide peptidase cleavage of GB virus B core protein is required for productive infection in vivo. J. Biol. Chem. 281:29221-29227. http://dx.doi.org/10.1074/jbc.M605373200.
    • (2006) J. Biol. Chem. , vol.281 , pp. 29221-29227
    • Targett-Adams, P.1    Schaller, T.2    Hope, G.3    Lanford, R.E.4    Lemon, S.M.5    Martin, A.6    McLauchlan, J.7
  • 13
    • 0037040227 scopus 로고    scopus 로고
    • The domains required to direct core proteins of hepatitis C virus and GB virus-B to lipid droplets share common features with plant oleosin proteins
    • Hope RG, Murphy DJ, McLauchlan J. 2002. The domains required to direct core proteins of hepatitis C virus and GB virus-B to lipid droplets share common features with plant oleosin proteins. J. Biol. Chem. 277: 4261-4270. http://dx.doi.org/10.1074/jbc.M108798200.
    • (2002) J. Biol. Chem. , vol.277 , pp. 4261-4270
    • Hope, R.G.1    Murphy, D.J.2    McLauchlan, J.3
  • 16
    • 6344223386 scopus 로고    scopus 로고
    • Hepatitis C virus core protein associates with detergent-resistant membranes distinct from classical plasma membrane rafts
    • Matto M, Rice CM, Aroeti B, Glenn JS. 2004. Hepatitis C virus core protein associates with detergent-resistant membranes distinct from classical plasma membrane rafts. J. Virol. 78:12047-12053. http://dx.doi.org/10.1128/JVI.78.21.12047-12053.2004.
    • (2004) J. Virol. , vol.78 , pp. 12047-12053
    • Matto, M.1    Rice, C.M.2    Aroeti, B.3    Glenn, J.S.4
  • 17
    • 50149086906 scopus 로고    scopus 로고
    • Intramembrane processing by signal peptide peptidase regulates the membrane localization of hepatitis C virus core protein and viral propagation
    • Okamoto K, Mori Y, Komoda Y, Okamoto T, Okochi M, Takeda M, Suzuki T, Moriishi K, Matsuura Y. 2008. Intramembrane processing by signal peptide peptidase regulates the membrane localization of hepatitis C virus core protein and viral propagation. J. Virol. 82:8349-8361. http://dx.doi.org/10.1128/JVI.00306-08.
    • (2008) J. Virol. , vol.82 , pp. 8349-8361
    • Okamoto, K.1    Mori, Y.2    Komoda, Y.3    Okamoto, T.4    Okochi, M.5    Takeda, M.6    Suzuki, T.7    Moriishi, K.8    Matsuura, Y.9
  • 18
    • 2942715265 scopus 로고    scopus 로고
    • Characterization of the hepatitis C virus RNA replication complex associated with lipid rafts
    • Aizaki H, Lee KJ, Sung VM, Ishiko H, Lai MM. 2004. Characterization of the hepatitis C virus RNA replication complex associated with lipid rafts. Virology 324:450-461. http://dx.doi.org/10.1016/j.virol.2004.03.034.
    • (2004) Virology , vol.324 , pp. 450-461
    • Aizaki, H.1    Lee, K.J.2    Sung, V.M.3    Ishiko, H.4    Lai, M.M.5
  • 19
    • 0036100578 scopus 로고    scopus 로고
    • Expression of hepatitis C virus proteins induces distinct membrane alterations including a candidate viral replication complex
    • Egger D, Wolk B, Gosert R, Bianchi L, Blum HE, Moradpour D, Bienz K. 2002. Expression of hepatitis C virus proteins induces distinct membrane alterations including a candidate viral replication complex. J. Virol. 76:5974-5984. http://dx.doi.org/10.1128/JVI.76.12.5974-5984.2002.
    • (2002) J. Virol. , vol.76 , pp. 5974-5984
    • Egger, D.1    Wolk, B.2    Gosert, R.3    Bianchi, L.4    Blum, H.E.5    Moradpour, D.6    Bienz, K.7
  • 20
    • 0025982062 scopus 로고
    • Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products
    • Marchuk D, Drumm M, Saulino A, Collins FS. 1991. Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products. Nucleic Acids Res. 19:1154. http://dx.doi.org/10.1093/nar/19.5.1154.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 1154
    • Marchuk, D.1    Drumm, M.2    Saulino, A.3    Collins, F.S.4
  • 21
    • 12344259370 scopus 로고    scopus 로고
    • Genetic characterization of Yokose virus, a flavivirus isolated from the bat in Japan
    • Tajima S, Takasaki T, Matsuno S, Nakayama M, Kurane I. 2005. Genetic characterization of Yokose virus, a flavivirus isolated from the bat in Japan. Virology 332:38-44. http://dx.doi.org/10.1016/j.virol.2004.06.052.
    • (2005) Virology , vol.332 , pp. 38-44
    • Tajima, S.1    Takasaki, T.2    Matsuno, S.3    Nakayama, M.4    Kurane, I.5
  • 22
    • 3242740948 scopus 로고    scopus 로고
    • Structure and function of the 3' terminal six nucleotides of the West Nile virus genome in viral replication
    • Tilgner M, Shi PY. 2004. Structure and function of the 3' terminal six nucleotides of the West Nile virus genome in viral replication. J. Virol. 78:8159-8171. http://dx.doi.org/10.1128/JVI.78.15.8159-8171.2004.
    • (2004) J. Virol. , vol.78 , pp. 8159-8171
    • Tilgner, M.1    Shi, P.Y.2
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 25
    • 0017873321 scopus 로고
    • Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins
    • Garnier J, Osguthorpe DJ, Robson B. 1978. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J. Mol. Biol. 120:97-120. http://dx.doi.org/10.1016/0022-2836(78)90297-8.
    • (1978) J. Mol. Biol. , vol.120 , pp. 97-120
    • Garnier, J.1    Osguthorpe, D.J.2    Robson, B.3
  • 26
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte J, Doolittle RF. 1982. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157:105-132. http://dx.doi.org/10.1016/0022-2836(82)90515-0.
    • (1982) J. Mol. Biol. , vol.157 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 27
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31:3406-3415. http://dx.doi.org/10.1093/nar/gkg595.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 28
    • 2642539953 scopus 로고    scopus 로고
    • Intramembrane proteolysis and endoplasmic reticulum retention of hepatitis C virus core protein
    • Okamoto K, Moriishi K, Miyamura T, Matsuura Y. 2004. Intramembrane proteolysis and endoplasmic reticulum retention of hepatitis C virus core protein. J. Virol. 78:6370-6380. http://dx.doi.org/10.1128/JVI.78.12.6370-6380.2004.
    • (2004) J. Virol. , vol.78 , pp. 6370-6380
    • Okamoto, K.1    Moriishi, K.2    Miyamura, T.3    Matsuura, Y.4
  • 30
    • 0029949695 scopus 로고    scopus 로고
    • Stability of a stem-loop involving the initiator AUG controls the efficiency of internal initiation of translation on hepatitis C virus RNA
    • Honda M, Brown EA, Lemon SM. 1996. Stability of a stem-loop involving the initiator AUG controls the efficiency of internal initiation of translation on hepatitis C virus RNA. RNA 2:955-968.
    • (1996) RNA , vol.2 , pp. 955-968
    • Honda, M.1    Brown, E.A.2    Lemon, S.M.3
  • 31
    • 0033515094 scopus 로고    scopus 로고
    • In vivo analysis of the 3' untranslated region of the hepatitis C virus after in vitro mutagenesis of an infectious cDNA clone
    • Yanagi M, St Claire M, Emerson SU, Purcell RH, Bukh J. 1999. In vivo analysis of the 3' untranslated region of the hepatitis C virus after in vitro mutagenesis of an infectious cDNA clone. Proc. Natl. Acad. Sci. U. S. A. 96:2291-2295. http://dx.doi.org/10.1073/pnas.96.5.2291.
    • (1999) Proc. Natl. Acad. Sci. U. S. A. , vol.96 , pp. 2291-2295
    • Yanagi, M.1    St Claire, M.2    Emerson, S.U.3    Purcell, R.H.4    Bukh, J.5
  • 32
    • 0030823630 scopus 로고    scopus 로고
    • Secondary structure determination of the conserved 98-base sequence at the 3' terminus of hepatitis C virus genome RNA
    • Blight KJ, Rice CM. 1997. Secondary structure determination of the conserved 98-base sequence at the 3' terminus of hepatitis C virus genome RNA. J. Virol. 71:7345-7352.
    • (1997) J. Virol. , vol.71 , pp. 7345-7352
    • Blight, K.J.1    Rice, C.M.2
  • 33
    • 10644226734 scopus 로고    scopus 로고
    • Kissing-loop interaction in the 3' end of the hepatitis C virus genome essential for RNA replication
    • Friebe P, Boudet J, Simorre JP, Bartenschlager R. 2005. Kissing-loop interaction in the 3' end of the hepatitis C virus genome essential for RNA replication. J. Virol. 79:380-392. http://dx.doi.org/10.1128/JVI.79.1.380-392.2005.
    • (2005) J. Virol. , vol.79 , pp. 380-392
    • Friebe, P.1    Boudet, J.2    Simorre, J.P.3    Bartenschlager, R.4
  • 34
    • 48249130096 scopus 로고    scopus 로고
    • Hepatitis C virus internal ribosome entry site-mediated translation is stimulated by cis-acting RNA elements and trans-acting viral factors
    • Lourenço S, Costa F, Debarges B, Andrieu T, Cahour A. 2008. Hepatitis C virus internal ribosome entry site-mediated translation is stimulated by cis-acting RNA elements and trans-acting viral factors. FEBS J. 275:4179-4197. http://dx.doi.org/10.1111/j.1742-4658.2008.06566.x.
    • (2008) FEBS J. , vol.275 , pp. 4179-4197
    • Lourenço, S.1    Costa, F.2    Debarges, B.3    Andrieu, T.4    Cahour, A.5
  • 35
    • 34447333097 scopus 로고    scopus 로고
    • Hepatitis C virus genetic variability in patients undergoing antiviral therapy
    • Cristina J, del Pilar Moreno M, Moratorio G. 2007. Hepatitis C virus genetic variability in patients undergoing antiviral therapy. Virus Res. 127: 185-194. http://dx.doi.org/10.1016/j.virusres.2007.02.023.
    • (2007) Virus Res. , vol.127 , pp. 185-194
    • Cristina, J.1    del Pilar Moreno, M.2    Moratorio, G.3
  • 36
    • 33751203577 scopus 로고    scopus 로고
    • The hepatitis C virus RNA 3'-untranslated region strongly enhances translation directed by the internal ribosome entry site
    • Song Y, Friebe P, Tzima E, Junemann C, Bartenschlager R, Niepmann M. 2006. The hepatitis C virus RNA 3'-untranslated region strongly enhances translation directed by the internal ribosome entry site. J. Virol. 80:11579-11588. http://dx.doi.org/10.1128/JVI.00675-06.
    • (2006) J. Virol. , vol.80 , pp. 11579-11588
    • Song, Y.1    Friebe, P.2    Tzima, E.3    Junemann, C.4    Bartenschlager, R.5    Niepmann, M.6
  • 37
    • 0036683052 scopus 로고    scopus 로고
    • Intramembrane proteolysis promotes trafficking of hepatitis C virus core protein to lipid droplets
    • McLauchlan J, Lemberg MK, Hope G, Martoglio B. 2002. Intramembrane proteolysis promotes trafficking of hepatitis C virus core protein to lipid droplets. EMBO J. 21:3980-3988. http://dx.doi.org/10.1093/emboj/cdf414.
    • (2002) EMBO J. , vol.21 , pp. 3980-3988
    • McLauchlan, J.1    Lemberg, M.K.2    Hope, G.3    Martoglio, B.4
  • 38
    • 6344265564 scopus 로고    scopus 로고
    • Membrane binding properties and terminal residues of the mature hepatitis C virus capsid protein in insect cells
    • Ogino T, Fukuda H, Imajoh-Ohmi S, Kohara M, Nomoto A. 2004. Membrane binding properties and terminal residues of the mature hepatitis C virus capsid protein in insect cells. J. Virol. 78:11766-11777. http://dx.doi.org/10.1128/JVI.78.21.11766-11777.2004.
    • (2004) J. Virol. , vol.78 , pp. 11766-11777
    • Ogino, T.1    Fukuda, H.2    Imajoh-Ohmi, S.3    Kohara, M.4    Nomoto, A.5
  • 39
    • 75449084143 scopus 로고    scopus 로고
    • Genetic analysis of the carboxy-terminal region of the hepatitis C virus core protein
    • Kopp M, Murray CL, Jones CT, Rice CM. 2010. Genetic analysis of the carboxy-terminal region of the hepatitis C virus core protein. J. Virol. 84:1666-1673. http://dx.doi.org/10.1128/JVI.02043-09.
    • (2010) J. Virol. , vol.84 , pp. 1666-1673
    • Kopp, M.1    Murray, C.L.2    Jones, C.T.3    Rice, C.M.4
  • 40
    • 0037150672 scopus 로고    scopus 로고
    • Identification of signal peptide peptidase, a presenilin-type aspartic protease
    • Weihofen A, Binns K, Lemberg MK, Ashman K, Martoglio B. 2002. Identification of signal peptide peptidase, a presenilin-type aspartic protease. Science 296:2215-2218. http://dx.doi.org/10.1126/science.1070925.
    • (2002) Science , vol.296 , pp. 2215-2218
    • Weihofen, A.1    Binns, K.2    Lemberg, M.K.3    Ashman, K.4    Martoglio, B.5
  • 42
    • 0033880575 scopus 로고    scopus 로고
    • Sequence motifs required for lipid droplet association and protein stability are unique to the hepatitis C virus core protein
    • Hope RG, McLauchlan J. 2000. Sequence motifs required for lipid droplet association and protein stability are unique to the hepatitis C virus core protein. J. Gen. Virol. 81:1913-1925.
    • (2000) J. Gen. Virol. , vol.81 , pp. 1913-1925
    • Hope, R.G.1    McLauchlan, J.2
  • 43
    • 1842457783 scopus 로고    scopus 로고
    • Interactions between viral nonstructural proteins and host protein hVAP-33 mediate the formation of hepatitis C virus RNA replication complex on lipid raft
    • Gao L, Aizaki H, He JW, Lai MM. 2004. Interactions between viral nonstructural proteins and host protein hVAP-33 mediate the formation of hepatitis C virus RNA replication complex on lipid raft. J. Virol. 78: 3480-3488. http://dx.doi.org/10.1128/JVI.78.7.3480-3488.2004.
    • (2004) J. Virol. , vol.78 , pp. 3480-3488
    • Gao, L.1    Aizaki, H.2    He, J.W.3    Lai, M.M.4
  • 44
    • 0345144016 scopus 로고    scopus 로고
    • Identification of the hepatitis C virus RNA replication complex in Huh-7 cells harboring subgenomic replicons
    • Gosert R, Egger D, Lohmann V, Bartenschlager R, Blum HE, Bienz K, Moradpour D. 2003. Identification of the hepatitis C virus RNA replication complex in Huh-7 cells harboring subgenomic replicons. J. Virol. 77:5487-5492. http://dx.doi.org/10.1128/JVI.77.9.5487-5492.2003.
    • (2003) J. Virol. , vol.77 , pp. 5487-5492
    • Gosert, R.1    Egger, D.2    Lohmann, V.3    Bartenschlager, R.4    Blum, H.E.5    Bienz, K.6    Moradpour, D.7
  • 45
    • 0037379425 scopus 로고    scopus 로고
    • Hepatitis C virus RNA replication occurs on a detergent-resistant membrane that cofractionates with caveolin-2
    • Shi ST, Lee KJ, Aizaki H, Hwang SB, Lai MM. 2003. Hepatitis C virus RNA replication occurs on a detergent-resistant membrane that cofractionates with caveolin-2. J. Virol. 77:4160-4168. http://dx.doi.org/10.1128/JVI.77.7.4160-4168.2003.
    • (2003) J. Virol. , vol.77 , pp. 4160-4168
    • Shi, S.T.1    Lee, K.J.2    Aizaki, H.3    Hwang, S.B.4    Lai, M.M.5
  • 46
    • 0026513651 scopus 로고
    • Internal ribosome entry site within hepatitis C virus RNA
    • Tsukiyama-Kohara K, Iizuka N, Kohara M, Nomoto A. 1992. Internal ribosome entry site within hepatitis C virus RNA. J. Virol. 66:1476-1483.
    • (1992) J. Virol. , vol.66 , pp. 1476-1483
    • Tsukiyama-Kohara, K.1    Iizuka, N.2    Kohara, M.3    Nomoto, A.4
  • 47
    • 62549152278 scopus 로고    scopus 로고
    • Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome
    • Babaylova E, Graifer D, Malygin A, Stahl J, Shatsky I, Karpova G. 2009. Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome. Nucleic Acids Res. 37:1141-1151. http://dx.doi.org/10.1093/nar/gkn1026.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1141-1151
    • Babaylova, E.1    Graifer, D.2    Malygin, A.3    Stahl, J.4    Shatsky, I.5    Karpova, G.6
  • 48
    • 0036237981 scopus 로고    scopus 로고
    • Crystal structure of an RNA tertiary domain essential to HCV IRES-mediated translation initiation
    • Kieft JS, Zhou K, Grech A, Jubin R, Doudna JA. 2002. Crystal structure of an RNA tertiary domain essential to HCV IRES-mediated translation initiation. Nat. Struct. Biol. 9:370-374. http://dx.doi.org/10.1038/nsb781.
    • (2002) Nat. Struct. Biol. , vol.9 , pp. 370-374
    • Kieft, J.S.1    Zhou, K.2    Grech, A.3    Jubin, R.4    Doudna, J.A.5
  • 49
    • 33846959081 scopus 로고    scopus 로고
    • HCV and CSFV IRES domain II mediate eIF2 release during 80S ribosome assembly
    • Locker N, Easton LE, Lukavsky PJ. 2007. HCV and CSFV IRES domain II mediate eIF2 release during 80S ribosome assembly. EMBO J. 26:795-805. http://dx.doi.org/10.1038/sj.emboj.7601549.
    • (2007) EMBO J. , vol.26 , pp. 795-805
    • Locker, N.1    Easton, L.E.2    Lukavsky, P.J.3
  • 50
    • 84887544062 scopus 로고    scopus 로고
    • The non-primate hepacivirus 5' untranslated region possesses internal ribosomal entry site activity
    • Stewart H, Walter C, Jones D, Lyons S, Simmonds P, Harris M. 2013. The non-primate hepacivirus 5' untranslated region possesses internal ribosomal entry site activity. J. Gen. Virol. 94:2657-2663. http://dx.doi.org/10.1099/vir.0.055764-0.
    • (2013) J. Gen. Virol. , vol.94 , pp. 2657-2663
    • Stewart, H.1    Walter, C.2    Jones, D.3    Lyons, S.4    Simmonds, P.5    Harris, M.6
  • 51
    • 50949115626 scopus 로고    scopus 로고
    • A hepatitis C virus cis-acting replication element forms a long-range RNA-RNA interaction with upstream RNA sequences in NS5B
    • Diviney S, Tuplin A, Struthers M, Armstrong V, Elliott RM, Simmonds P, Evans DJ. 2008. A hepatitis C virus cis-acting replication element forms a long-range RNA-RNA interaction with upstream RNA sequences in NS5B. J. Virol. 82:9008-9022. http://dx.doi.org/10.1128/JVI.02326-07.
    • (2008) J. Virol. , vol.82 , pp. 9008-9022
    • Diviney, S.1    Tuplin, A.2    Struthers, M.3    Armstrong, V.4    Elliott, R.M.5    Simmonds, P.6    Evans, D.J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.