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Volumn 588, Issue 21, 2014, Pages 3802-3807

Toll-like receptor 3 transmembrane domain is able to perform various homotypic interactions: An NMR structural study

Author keywords

Dimerization; Free energy; Spatial structure; Toll like receptor; Transmembrane domain

Indexed keywords

DETERGENT; DIMER; DODECYLPHOSPHORYLCHOLINE; POLYMER; TOLL LIKE RECEPTOR 3; TRIMER; UNCLASSIFIED DRUG; MICELLE; PHOSPHORYLCHOLINE; PROTEIN BINDING; TLR3 PROTEIN, HUMAN;

EID: 84908318473     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2014.08.031     Document Type: Article
Times cited : (27)

References (46)
  • 1
    • 0035524488 scopus 로고    scopus 로고
    • Toll-like receptors and innate immunity
    • R. Medzhitov Toll-like receptors and innate immunity Nat. Rev. Immunol. 1 2001 135 145 10.1038/35100529
    • (2001) Nat. Rev. Immunol. , vol.1 , pp. 135-145
    • Medzhitov, R.1
  • 2
    • 77951260924 scopus 로고    scopus 로고
    • The role of pattern-recognition receptors in innate immunity: Update on Toll-like receptors
    • T. Kawai, and S. Akira The role of pattern-recognition receptors in innate immunity: update on Toll-like receptors Nat. Immunol. 11 2010 373 384 10.1038/ni.1863
    • (2010) Nat. Immunol. , vol.11 , pp. 373-384
    • Kawai, T.1    Akira, S.2
  • 4
    • 42349090335 scopus 로고    scopus 로고
    • Structural basis of Toll-like receptor 3 signaling with double-stranded RNA
    • L. Liu, I. Botos, Y. Wang, J.N. Leonard, J. Shiloach, and D.M. Segal Structural basis of Toll-like receptor 3 signaling with double-stranded RNA Science 320 2008 379 381 10.1126/science.1155406
    • (2008) Science , vol.320 , pp. 379-381
    • Liu, L.1    Botos, I.2    Wang, Y.3    Leonard, J.N.4    Shiloach, J.5    Segal, D.M.6
  • 5
    • 34548608447 scopus 로고    scopus 로고
    • Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide
    • M.S. Jin, S.E. Kim, J.Y. Heo, M.E. Lee, H.M. Kim, and S.-G. Paik Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide Cell 130 2007 1071 1082 10.1016/j.cell.2007.09.008
    • (2007) Cell , vol.130 , pp. 1071-1082
    • Jin, M.S.1    Kim, S.E.2    Heo, J.Y.3    Lee, M.E.4    Kim, H.M.5    Paik, S.-G.6
  • 6
    • 71749118913 scopus 로고    scopus 로고
    • Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer
    • J.Y. Kang, X. Nan, M.S. Jin, S.-J. Youn, Y.H. Ryu, and S. Mah Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer Immunity 31 2009 873 884 10.1016/j.immuni.2009.09.018
    • (2009) Immunity , vol.31 , pp. 873-884
    • Kang, J.Y.1    Nan, X.2    Jin, M.S.3    Youn, S.-J.4    Ryu, Y.H.5    Mah, S.6
  • 7
    • 67349182481 scopus 로고    scopus 로고
    • The structural basis of lipopolysaccharide recognition by the TLR4-MD-2 complex
    • B.S. Park, D.H. Song, H.M. Kim, B.-S. Choi, H. Lee, and J.-O. Lee The structural basis of lipopolysaccharide recognition by the TLR4-MD-2 complex Nature 458 2009 1191 1195 10.1038/nature07830
    • (2009) Nature , vol.458 , pp. 1191-1195
    • Park, B.S.1    Song, D.H.2    Kim, H.M.3    Choi, B.-S.4    Lee, H.5    Lee, J.-O.6
  • 8
    • 5444254408 scopus 로고    scopus 로고
    • Toll-like receptors in the pathogenesis of human disease
    • D.N. Cook, D.S. Pisetsky, and D.A. Schwartz Toll-like receptors in the pathogenesis of human disease Nat. Immunol. 5 2004 975 979 10.1038/ni1116
    • (2004) Nat. Immunol. , vol.5 , pp. 975-979
    • Cook, D.N.1    Pisetsky, D.S.2    Schwartz, D.A.3
  • 9
    • 84855163540 scopus 로고    scopus 로고
    • Intrinsic danger: Activation of Toll-like receptors in rheumatoid arthritis
    • F.G. Goh, and K.S. Midwood Intrinsic danger: activation of Toll-like receptors in rheumatoid arthritis Rheumatol. Oxford Engl. 51 2012 7 23 10.1093/rheumatology/ker257
    • (2012) Rheumatol. Oxford Engl. , vol.51 , pp. 7-23
    • Goh, F.G.1    Midwood, K.S.2
  • 11
    • 67649422321 scopus 로고    scopus 로고
    • Therapeutic targeting of Toll-like receptors for infectious and inflammatory diseases and cancer
    • L.A.J. O'Neill, C.E. Bryant, and S.L. Doyle Therapeutic targeting of Toll-like receptors for infectious and inflammatory diseases and cancer Pharmacol. Rev. 61 2009 177 197 10.1124/pr.109.001073
    • (2009) Pharmacol. Rev. , vol.61 , pp. 177-197
    • O'Neill, L.A.J.1    Bryant, C.E.2    Doyle, S.L.3
  • 12
    • 72049122659 scopus 로고    scopus 로고
    • Drugs targeting Toll-like receptors
    • J. Krishnan, G. Lee, and S. Choi Drugs targeting Toll-like receptors Arch. Pharmacal Res. 32 2009 1485 1502 10.1007/s12272-009-2100-6
    • (2009) Arch. Pharmacal Res. , vol.32 , pp. 1485-1502
    • Krishnan, J.1    Lee, G.2    Choi, S.3
  • 13
    • 3543011350 scopus 로고    scopus 로고
    • Differential induction of gene promoter constructs by constitutively active human TLRs
    • U.A. Hasan, S. Dollet, and J. Vlach Differential induction of gene promoter constructs by constitutively active human TLRs Biochem. Biophys. Res. Commun. 321 2004 124 131 10.1016/j.bbrc.2004.06.134
    • (2004) Biochem. Biophys. Res. Commun. , vol.321 , pp. 124-131
    • Hasan, U.A.1    Dollet, S.2    Vlach, J.3
  • 14
    • 0037021421 scopus 로고    scopus 로고
    • Integrin-nucleated Toll-like receptor (TLR) dimerization reveals subcellular targeting of TLRs and distinct mechanisms of TLR4 activation and signaling
    • H. Zhang, P.N. Tay, W. Cao, W. Li, and J. Lu Integrin-nucleated Toll-like receptor (TLR) dimerization reveals subcellular targeting of TLRs and distinct mechanisms of TLR4 activation and signaling FEBS Lett. 532 2002 171 176
    • (2002) FEBS Lett. , vol.532 , pp. 171-176
    • Zhang, H.1    Tay, P.N.2    Cao, W.3    Li, W.4    Lu, J.5
  • 15
    • 34250698370 scopus 로고    scopus 로고
    • Ligand-induced conformational changes allosterically activate Toll-like receptor 9
    • E. Latz, A. Verma, A. Visintin, M. Gong, C.M. Sirois, and D.C.G. Klein Ligand-induced conformational changes allosterically activate Toll-like receptor 9 Nat. Immunol. 8 2007 772 779 10.1038/ni1479
    • (2007) Nat. Immunol. , vol.8 , pp. 772-779
    • Latz, E.1    Verma, A.2    Visintin, A.3    Gong, M.4    Sirois, C.M.5    Klein, D.C.G.6
  • 16
    • 0035979763 scopus 로고    scopus 로고
    • Activation of preformed EGF receptor dimers by ligand-induced rotation of the transmembrane domain
    • T. Moriki, H. Maruyama, and I.N. Maruyama Activation of preformed EGF receptor dimers by ligand-induced rotation of the transmembrane domain J. Mol. Biol. 311 2001 1011 1026 10.1006/jmbi.2001.4923
    • (2001) J. Mol. Biol. , vol.311 , pp. 1011-1026
    • Moriki, T.1    Maruyama, H.2    Maruyama, I.N.3
  • 17
    • 61649107393 scopus 로고    scopus 로고
    • Different functional role of domain boundaries of Toll-like receptor 4
    • M. Treeby, J. Vasl, P. Ota, J. Friedrich, and R. Jerala Different functional role of domain boundaries of Toll-like receptor 4 Biochem. Biophys. Res. Commun. 381 2009 65 69 10.1016/j.bbrc.2009.02.017
    • (2009) Biochem. Biophys. Res. Commun. , vol.381 , pp. 65-69
    • Treeby, M.1    Vasl, J.2    Ota, P.3    Friedrich, J.4    Jerala, R.5
  • 18
    • 79959536183 scopus 로고    scopus 로고
    • The ectodomain of the Toll-like receptor 4 prevents constitutive receptor activation
    • G. Panter, and R. Jerala The ectodomain of the Toll-like receptor 4 prevents constitutive receptor activation J. Biol. Chem. 286 2011 23334 23344 10.1074/jbc.M110.205419
    • (2011) J. Biol. Chem. , vol.286 , pp. 23334-23344
    • Panter, G.1    Jerala, R.2
  • 19
    • 84869105188 scopus 로고    scopus 로고
    • Isolated Toll-like receptor transmembrane domains are capable of oligomerization
    • J.I. Godfroy, M. Roostan, Y.S. Moroz, I.V. Korendovych, and H. Yin Isolated Toll-like receptor transmembrane domains are capable of oligomerization PLoS One 7 2012 e48875 10.1371/journal.pone.0048875
    • (2012) PLoS One , vol.7 , pp. 48875
    • Godfroy, J.I.1    Roostan, M.2    Moroz, Y.S.3    Korendovych, I.V.4    Yin, H.5
  • 20
    • 39149143698 scopus 로고    scopus 로고
    • Preparative scale expression of membrane proteins in Escherichia coli-based continuous exchange cell-free systems
    • D. Schwarz, F. Junge, F. Durst, N. Frölich, B. Schneider, and S. Reckel Preparative scale expression of membrane proteins in Escherichia coli-based continuous exchange cell-free systems Nat. Protoc. 2 2007 2945 2957 10.1038/nprot.2007.426
    • (2007) Nat. Protoc. , vol.2 , pp. 2945-2957
    • Schwarz, D.1    Junge, F.2    Durst, F.3    Frölich, N.4    Schneider, B.5    Reckel, S.6
  • 21
    • 0024297305 scopus 로고
    • A continuous cell-free translation system capable of producing polypeptides in high yield
    • A.S. Spirin, V.I. Baranov, L.A. Ryabova, S.Y. Ovodov, and Y.B. Alakhov A continuous cell-free translation system capable of producing polypeptides in high yield Science 242 1988 1162 1164
    • (1988) Science , vol.242 , pp. 1162-1164
    • Spirin, A.S.1    Baranov, V.I.2    Ryabova, L.A.3    Ovodov, S.Y.4    Alakhov, Y.B.5
  • 24
    • 79951549811 scopus 로고    scopus 로고
    • Recovering lost magnetization: Polarization enhancement in biomolecular NMR
    • A. Favier, and B. Brutscher Recovering lost magnetization: polarization enhancement in biomolecular NMR J. Biomol. NMR 49 2011 9 15 10.1007/s10858-010-9461-5
    • (2011) J. Biomol. NMR , vol.49 , pp. 9-15
    • Favier, A.1    Brutscher, B.2
  • 26
    • 80052810923 scopus 로고    scopus 로고
    • Analysis of non-uniformly sampled spectra with multi-dimensional decomposition
    • V.Y. Orekhov, and V.A. Jaravine Analysis of non-uniformly sampled spectra with multi-dimensional decomposition Prog. Nucl. Magn. Reson. Spectrosc. 59 2011 271 292 10.1016/j.pnmrs.2011.02.002
    • (2011) Prog. Nucl. Magn. Reson. Spectrosc. , vol.59 , pp. 271-292
    • Orekhov, V.Y.1    Jaravine, V.A.2
  • 27
    • 33746082442 scopus 로고    scopus 로고
    • Speeding up three-dimensional protein NMR experiments to a few minutes
    • P. Schanda, H. Van Melckebeke, and B. Brutscher Speeding up three-dimensional protein NMR experiments to a few minutes J. Am. Chem. Soc. 128 2006 9042 9043 10.1021/ja062025p
    • (2006) J. Am. Chem. Soc. , vol.128 , pp. 9042-9043
    • Schanda, P.1    Van Melckebeke, H.2    Brutscher, B.3
  • 28
    • 0034133030 scopus 로고    scopus 로고
    • 3D HCCH3-TOCSY for resonance assignment of methyl-containing side chains in 13C-labeled proteins
    • D. UhrIìn, S. UhrIÍnová, C. Leadbeater, J. Nairn, N.C. Price, and P.N. Barlow 3D HCCH3-TOCSY for resonance assignment of methyl-containing side chains in 13C-labeled proteins J. Magn. Reson. 142 2000 288 293 10.1006/jmre.1999.1951
    • (2000) J. Magn. Reson. , vol.142 , pp. 288-293
    • Uhriìn, D.1    Uhriínová, S.2    Leadbeater, C.3    Nairn, J.4    Price, N.C.5    Barlow, P.N.6
  • 29
    • 0027636003 scopus 로고
    • A simple and sensitive experiment for measurement of JCC couplings between backbone carbonyl and methyl carbons in isotopically enriched proteins
    • S. Grzesiek, G.W. Vuister, and A. Bax A simple and sensitive experiment for measurement of JCC couplings between backbone carbonyl and methyl carbons in isotopically enriched proteins J. Biomol. NMR 3 1993 487 493
    • (1993) J. Biomol. NMR , vol.3 , pp. 487-493
    • Grzesiek, S.1    Vuister, G.W.2    Bax, A.3
  • 30
    • 0001237847 scopus 로고
    • Measurement of three-bond nitrogen-carbon J couplings in proteins uniformly enriched in nitrogen-15 and carbon-13
    • G.W. Vuister, A.C. Wang, and A. Bax Measurement of three-bond nitrogen-carbon J couplings in proteins uniformly enriched in nitrogen-15 and carbon-13 J. Am. Chem. Soc. 115 1993 5334 5335
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 5334-5335
    • Vuister, G.W.1    Wang, A.C.2    Bax, A.3
  • 31
    • 0030808350 scopus 로고    scopus 로고
    • Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: Application to a bacteriophage λ N-peptide/boxB RNA complex
    • C. Zwahlen, P. Legault, S.J.F. Vincent, J. Greenblatt, R. Konrat, and L.E. Kay Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: application to a bacteriophage λ N-peptide/boxB RNA complex J. Am. Chem. Soc. 119 1997 6711 6721 10.1021/ja970224q
    • (1997) J. Am. Chem. Soc. , vol.119 , pp. 6711-6721
    • Zwahlen, C.1    Legault, P.2    Vincent, S.J.F.3    Greenblatt, J.4    Konrat, R.5    Kay, L.E.6
  • 32
    • 68349093958 scopus 로고    scopus 로고
    • TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
    • Y. Shen, F. Delaglio, G. Cornilescu, and A. Bax TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts J. Biomol. NMR 44 2009 213 223 10.1007/s10858-009-9333-z
    • (2009) J. Biomol. NMR , vol.44 , pp. 213-223
    • Shen, Y.1    Delaglio, F.2    Cornilescu, G.3    Bax, A.4
  • 33
    • 0031576336 scopus 로고    scopus 로고
    • Torsion angle dynamics for NMR structure calculation with the new program DYANA
    • P. Güntert, C. Mumenthaler, and K. Wüthrich Torsion angle dynamics for NMR structure calculation with the new program DYANA J. Mol. Biol. 273 1997 283 298 10.1006/jmbi.1997.1284
    • (1997) J. Mol. Biol. , vol.273 , pp. 283-298
    • Güntert, P.1    Mumenthaler, C.2    Wüthrich, K.3
  • 34
    • 0029881007 scopus 로고    scopus 로고
    • MOLMOL: A program for display and analysis of macromolecular structures
    • R. Koradi, M. Billeter, and K. Wüthrich MOLMOL: a program for display and analysis of macromolecular structures J. Mol. Graph. 14 51-55 1996 29 32
    • (1996) J. Mol. Graph. , vol.14 , Issue.5155 , pp. 29-32
    • Koradi, R.1    Billeter, M.2    Wüthrich, K.3
  • 36
    • 84861837644 scopus 로고
    • Structural and thermodynamic insight into the process of "weak" dimerization of the ErbB4 transmembrane domain by solution NMR
    • E.V. Bocharov, K.S. Mineev, M.V. Goncharuk, and A.S. Arseniev Structural and thermodynamic insight into the process of "weak" dimerization of the ErbB4 transmembrane domain by solution NMR Biochim. Biophys. Acta 2012 1818 2158 2170 10.1016/j.bbamem.2012.05.001
    • (1818) Biochim. Biophys. Acta , vol.2012 , pp. 2158-2170
    • Bocharov, E.V.1    Mineev, K.S.2    Goncharuk, M.V.3    Arseniev, A.S.4
  • 37
    • 84887406746 scopus 로고    scopus 로고
    • Structure of FGFR3 transmembrane domain dimer: Implications for signaling and human pathologies
    • E.V. Bocharov, D.M. Lesovoy, S.A. Goncharuk, M.V. Goncharuk, K. Hristova, and A.S. Arseniev Structure of FGFR3 transmembrane domain dimer: implications for signaling and human pathologies Struct. Lond. Engl. 1993 21 2013 2087 2093 10.1016/j.str.2013.08.026
    • (2013) Struct. Lond. Engl. , vol.1993 , Issue.21 , pp. 2087-2093
    • Bocharov, E.V.1    Lesovoy, D.M.2    Goncharuk, S.A.3    Goncharuk, M.V.4    Hristova, K.5    Arseniev, A.S.6
  • 38
    • 34548013094 scopus 로고    scopus 로고
    • Studies of receptor tyrosine kinase transmembrane domain interactions: The EmEx-FRET method
    • M. Merzlyakov, L. Chen, and K. Hristova Studies of receptor tyrosine kinase transmembrane domain interactions: the EmEx-FRET method J. Membr. Biol. 215 2007 93 103 10.1007/s00232-007-9009-0
    • (2007) J. Membr. Biol. , vol.215 , pp. 93-103
    • Merzlyakov, M.1    Chen, L.2    Hristova, K.3
  • 39
    • 0032732426 scopus 로고    scopus 로고
    • Detergents modulate dimerization, but not helicity, of the glycophorin A transmembrane domain
    • L.E. Fisher, D.M. Engelman, and J.N. Sturgis Detergents modulate dimerization, but not helicity, of the glycophorin A transmembrane domain J. Mol. Biol. 293 1999 639 651 10.1006/jmbi.1999.3126
    • (1999) J. Mol. Biol. , vol.293 , pp. 639-651
    • Fisher, L.E.1    Engelman, D.M.2    Sturgis, J.N.3
  • 40
    • 0036408542 scopus 로고    scopus 로고
    • Standardizing the free energy change of transmembrane helix-helix interactions
    • K.G. Fleming Standardizing the free energy change of transmembrane helix-helix interactions J. Mol. Biol. 323 2002 563 571 10.1016/S0022-2836(02)00920-8
    • (2002) J. Mol. Biol. , vol.323 , pp. 563-571
    • Fleming, K.G.1
  • 41
    • 0033983453 scopus 로고    scopus 로고
    • Asparagine-mediated self-association of a model transmembrane helix
    • C. Choma, H. Gratkowski, J.D. Lear, and W.F. DeGrado Asparagine-mediated self-association of a model transmembrane helix Nat. Struct. Biol. 7 2000 161 166 10.1038/72440
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 161-166
    • Choma, C.1    Gratkowski, H.2    Lear, J.D.3    Degrado, W.F.4
  • 42
    • 0007949690 scopus 로고    scopus 로고
    • Interhelical hydrogen bonding drives strong interactions in membrane proteins
    • F.X. Zhou, M.J. Cocco, W.P. Russ, A.T. Brunger, and D.M. Engelman Interhelical hydrogen bonding drives strong interactions in membrane proteins Nat. Struct. Biol. 7 2000 154 160 10.1038/72430
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 154-160
    • Zhou, F.X.1    Cocco, M.J.2    Russ, W.P.3    Brunger, A.T.4    Engelman, D.M.5
  • 43
    • 0034711953 scopus 로고    scopus 로고
    • The GxxxG motif: A framework for transmembrane helix-helix association
    • W.P. Russ, and D.M. Engelman The GxxxG motif: a framework for transmembrane helix-helix association J. Mol. Biol. 296 2000 911 919 10.1006/jmbi.1999.3489
    • (2000) J. Mol. Biol. , vol.296 , pp. 911-919
    • Russ, W.P.1    Engelman, D.M.2
  • 44
    • 33748791763 scopus 로고    scopus 로고
    • Helix-packing motifs in membrane proteins
    • R.F.S. Walters, and W.F. DeGrado Helix-packing motifs in membrane proteins Proc. Natl. Acad. Sci. 103 2006 13658 13663 10.1073/pnas.0605878103
    • (2006) Proc. Natl. Acad. Sci. , vol.103 , pp. 13658-13663
    • Walters, R.F.S.1    Degrado, W.F.2
  • 45
    • 34547131849 scopus 로고    scopus 로고
    • Specificity in transmembrane helix-helix interactions mediated by aromatic residues
    • N. Sal-Man, D. Gerber, I. Bloch, and Y. Shai Specificity in transmembrane helix-helix interactions mediated by aromatic residues J. Biol. Chem. 282 2007 19753 19761 10.1074/jbc.M610368200
    • (2007) J. Biol. Chem. , vol.282 , pp. 19753-19761
    • Sal-Man, N.1    Gerber, D.2    Bloch, I.3    Shai, Y.4
  • 46
    • 33749162032 scopus 로고    scopus 로고
    • Measurement of 15N relaxation in the detergent-solubilized tetrameric KcsA potassium channel
    • J.H. Chill, J.M. Louis, J.L. Baber, and A. Bax Measurement of 15N relaxation in the detergent-solubilized tetrameric KcsA potassium channel J. Biomol. NMR 36 2006 123 136 10.1007/s10858-006-9071-4
    • (2006) J. Biomol. NMR , vol.36 , pp. 123-136
    • Chill, J.H.1    Louis, J.M.2    Baber, J.L.3    Bax, A.4


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