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Volumn 9, Issue 10, 2014, Pages

Correction: Inferring protein modulation from gene expression data using conditional mutual information (PLoS ONE (2016) 9:10 (e109569) DOI: 10.1371/journal.pone.0109569);Inferring protein modulation from gene expression data using conditional mutual information

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR; MESSENGER RNA; PROTEIN;

EID: 84907970841     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0163402     Document Type: Erratum
Times cited : (21)

References (67)
  • 2
    • 70249108504 scopus 로고    scopus 로고
    • Genomewide identification of post-translational modulators of transcription factor activity in human B cells
    • Wang K, Saito M, Bisikirska BC, Alvarez MJ, Lim WK, et al. (2009) Genomewide identification of post-translational modulators of transcription factor activity in human B cells. Nat Biotechnol 27: 829-839.
    • (2009) Nat Biotechnol , vol.27 , pp. 829-839
    • Wang, K.1    Saito, M.2    Bisikirska, B.C.3    Alvarez, M.J.4    Lim, W.K.5
  • 4
    • 84875159954 scopus 로고    scopus 로고
    • Comparative study of RNA-seq-and Microarray-derived coexpression networks in Arabidopsis thaliana
    • Giorgi FM, Del Fabbro C, Licausi F (2013) Comparative study of RNA-seq-and Microarray-derived coexpression networks in Arabidopsis thaliana. Bioinformatics 29: 717-724.
    • (2013) Bioinformatics , vol.29 , pp. 717-724
    • Giorgi, F.M.1    Del Fabbro, C.2    Licausi, F.3
  • 5
    • 75149195336 scopus 로고    scopus 로고
    • The transcriptional network for mesenchymal transformation of brain tumours
    • Carro MS, Lim WK, Alvarez MJ, Bollo RJ, Zhao X, et al. (2010) The transcriptional network for mesenchymal transformation of brain tumours. Nature 463: 318-325.
    • (2010) Nature , vol.463 , pp. 318-325
    • Carro, M.S.1    Lim, W.K.2    Alvarez, M.J.3    Bollo, R.J.4    Zhao, X.5
  • 6
    • 68349116164 scopus 로고    scopus 로고
    • The N-Myc-DLL3 cascade is suppressed by the ubiquitin ligase Huwe1 to inhibit proliferation and promote neurogenesis in the developing brain
    • Zhao X, D DA, Lim WK, Brahmachary M, Carro MS, et al. (2009) The N-Myc-DLL3 cascade is suppressed by the ubiquitin ligase Huwe1 to inhibit proliferation and promote neurogenesis in the developing brain. Dev Cell 17: 210-221.
    • (2009) Dev Cell , vol.17 , pp. 210-221
    • Zhao, X.1    D, D.A.2    Lim, W.K.3    Brahmachary, M.4    Carro, M.S.5
  • 7
    • 84900328733 scopus 로고    scopus 로고
    • Cross-species analysis of genome-wide regulatory networks identifies a synergistic interaction between FOXM1 and CENPF that drives prostate cancer malignancy
    • in press
    • Aytes A, Mitrofanova A, Lefebvre C, Alvarez MJ, Castillo-Martin M, et al. (2014) Cross-species analysis of genome-wide regulatory networks identifies a synergistic interaction between FOXM1 and CENPF that drives prostate cancer malignancy. Cancer Cell, in press.
    • (2014) Cancer Cell
    • Aytes, A.1    Mitrofanova, A.2    Lefebvre, C.3    Alvarez, M.J.4    Castillo-Martin, M.5
  • 8
    • 22844446947 scopus 로고    scopus 로고
    • An integrative genomics approach to infer causal associations between gene expression and disease
    • Schadt EE, Lamb J, Yang X, Zhu J, Edwards S, et al. (2005) An integrative genomics approach to infer causal associations between gene expression and disease. Nat Genet 37: 710-717.
    • (2005) Nat Genet , vol.37 , pp. 710-717
    • Schadt, E.E.1    Lamb, J.2    Yang, X.3    Zhu, J.4    Edwards, S.5
  • 9
    • 0842288337 scopus 로고    scopus 로고
    • Inferring cellular networks using probabilistic graphical models
    • Friedman N (2004) Inferring cellular networks using probabilistic graphical models. Science 303: 799-805.
    • (2004) Science , vol.303 , pp. 799-805
    • Friedman, N.1
  • 10
    • 46249109755 scopus 로고    scopus 로고
    • Discerning static and causal interactions in genome-wide reverse engineering problems
    • Zampieri M, Soranzo N, Altafini C (2008) Discerning static and causal interactions in genome-wide reverse engineering problems. Bioinformatics 24: 1510-1515.
    • (2008) Bioinformatics , vol.24 , pp. 1510-1515
    • Zampieri, M.1    Soranzo, N.2    Altafini, C.3
  • 11
    • 4644326931 scopus 로고    scopus 로고
    • Genomic analysis of regulatory network dynamics reveals large topological changes
    • Luscombe NM, Babu MM, Yu H, Snyder M, Teichmann SA, et al. (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431: 308-312.
    • (2004) Nature , vol.431 , pp. 308-312
    • Luscombe, N.M.1    Babu, M.M.2    Yu, H.3    Snyder, M.4    Teichmann, S.A.5
  • 12
    • 70249108504 scopus 로고    scopus 로고
    • Genomewide identification of post-translational modulators of transcription factor activity in human B cells
    • Wang K, Saito M, Bisikirska BC, Alvarez MJ, Lim WK, et al. (2009) Genomewide identification of post-translational modulators of transcription factor activity in human B cells. Nature biotechnology 27: 829-837.
    • (2009) Nature Biotechnology , vol.27 , pp. 829-837
    • Wang, K.1    Saito, M.2    Bisikirska, B.C.3    Alvarez, M.J.4    Lim, W.K.5
  • 13
    • 84887498337 scopus 로고    scopus 로고
    • STK38 is a critical upstream regulator of MYC's oncogenic activity in human Bcell lymphoma
    • Bisikirska BC, Adam SJ, Alvarez MJ, Rajbhandari P, Cox R, et al. (2012) STK38 is a critical upstream regulator of MYC's oncogenic activity in human Bcell lymphoma. Oncogene.
    • (2012) Oncogene
    • Bisikirska, B.C.1    Adam, S.J.2    Alvarez, M.J.3    Rajbhandari, P.4    Cox, R.5
  • 14
    • 80555139622 scopus 로고    scopus 로고
    • Genome-wide dissection of posttranscriptional and posttranslational interactions
    • Springer
    • Bansal M, Califano A (2012) Genome-wide dissection of posttranscriptional and posttranslational interactions. Gene Regulatory Networks: Springer. pp. 131-149.
    • (2012) Gene Regulatory Networks , pp. 131-149
    • Bansal, M.1    Califano, A.2
  • 15
    • 39149143293 scopus 로고    scopus 로고
    • A systems biology approach to prediction of oncogenes and molecular perturbation targets in B-cell lymphomas
    • Mani KM, Lefebvre C, Wang K, Lim WK, Basso K, et al. (2008) A systems biology approach to prediction of oncogenes and molecular perturbation targets in B-cell lymphomas. Mol Syst Biol 4: 169.
    • (2008) Mol Syst Biol , vol.4 , pp. 169
    • Mani, K.M.1    Lefebvre, C.2    Wang, K.3    Lim, W.K.4    Basso, K.5
  • 17
    • 77649222742 scopus 로고    scopus 로고
    • Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells
    • Basso K, Saito M, Sumazin P, Margolin AA, Wang K, et al. (2010) Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells. Blood 115: 975-984.
    • (2010) Blood , vol.115 , pp. 975-984
    • Basso, K.1    Saito, M.2    Sumazin, P.3    Margolin, A.A.4    Wang, K.5
  • 18
    • 84866894408 scopus 로고    scopus 로고
    • Comprehensive genomic characterization of squamous cell lung cancers
    • Hammerman P, Lawrence M, Voet D, Jing R, Cibulskis K, et al. (2012) Comprehensive genomic characterization of squamous cell lung cancers. Nature 489: 519-525.
    • (2012) Nature , vol.489 , pp. 519-525
    • Hammerman, P.1    Lawrence, M.2    Voet, D.3    Jing, R.4    Cibulskis, K.5
  • 20
    • 79957874673 scopus 로고    scopus 로고
    • Next-generation sequencing to generate interactome datasets
    • Yu H, Tardivo L, Tam S, Weiner E, Gebreab F, et al. (2011) Next-generation sequencing to generate interactome datasets. Nature methods 8: 478-480.
    • (2011) Nature Methods , vol.8 , pp. 478-480
    • Yu, H.1    Tardivo, L.2    Tam, S.3    Weiner, E.4    Gebreab, F.5
  • 21
    • 84876515907 scopus 로고    scopus 로고
    • STRING v9. 1: Protein-protein interaction networks, with increased coverage and integration
    • Franceschini A, Szklarczyk D, Frankild S, Kuhn M, Simonovic M, et al. (2013) STRING v9. 1: protein-protein interaction networks, with increased coverage and integration. Nucleic acids research 41: D808-D815.
    • (2013) Nucleic Acids Research , vol.41 , pp. D808-D815
    • Franceschini, A.1    Szklarczyk, D.2    Frankild, S.3    Kuhn, M.4    Simonovic, M.5
  • 22
    • 84857047339 scopus 로고    scopus 로고
    • PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse
    • Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, et al. (2012) PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic acids research 40: D261-D270.
    • (2012) Nucleic Acids Research , vol.40 , pp. D261-D270
    • Hornbeck, P.V.1    Kornhauser, J.M.2    Tkachev, S.3    Zhang, B.4    Skrzypek, E.5
  • 23
    • 77957243164 scopus 로고    scopus 로고
    • ChEA: Transcription factor regulation inferred from integrating genome-wide ChIP-X experiments
    • Lachmann A, Xu H, Krishnan J, Berger SI, Mazloom AR, et al. (2010) ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments. Bioinformatics 26: 2438-2444.
    • (2010) Bioinformatics , vol.26 , pp. 2438-2444
    • Lachmann, A.1    Xu, H.2    Krishnan, J.3    Berger, S.I.4    Mazloom, A.R.5
  • 24
    • 77649222742 scopus 로고    scopus 로고
    • Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells
    • Basso K, Saito M, Sumazin P, Margolin AA, Wang K, et al. (2010) Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells. Blood 115: 975-984.
    • (2010) Blood , vol.115 , pp. 975-984
    • Basso, K.1    Saito, M.2    Sumazin, P.3    Margolin, A.A.4    Wang, K.5
  • 25
    • 33846400424 scopus 로고    scopus 로고
    • Largescale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles
    • Faith JJ, Hayete B, Thaden JT, Mogno I, Wierzbowski J, et al. (2007) Largescale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles. PLoS biology 5: e8.
    • (2007) PLoS Biology , vol.5 , pp. e8
    • Faith, J.J.1    Hayete, B.2    Thaden, J.T.3    Mogno, I.4    Wierzbowski, J.5
  • 26
    • 84900566215 scopus 로고    scopus 로고
    • Mider: Network inference with mutual information distance and entropy reduction
    • Villaverde AF, Ross J, Morán F, Banga JR (2014) Mider: network inference with mutual information distance and entropy reduction. PloS one 9: e96732.
    • (2014) PloS One , vol.9 , pp. e96732
    • Villaverde, A.F.1    Ross, J.2    Morán, F.3    Banga, J.R.4
  • 27
    • 33947305781 scopus 로고    scopus 로고
    • ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context
    • Margolin AA, Nemenman I, Basso K, Wiggins C, Stolovitzky G, et al. (2006) ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. BMC bioinformatics 7: S7.
    • (2006) BMC Bioinformatics , vol.7 , pp. S7
    • Margolin, A.A.1    Nemenman, I.2    Basso, K.3    Wiggins, C.4    Stolovitzky, G.5
  • 28
    • 34848903220 scopus 로고    scopus 로고
    • From correlation to causation networks: A simple approximate learning algorithm and its application to high-dimensional plant gene expression data
    • Opgen-Rhein R, Strimmer K (2007) From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data. BMC systems biology 1: 37.
    • (2007) BMC Systems Biology , vol.1 , pp. 37
    • Opgen-Rhein, R.1    Strimmer, K.2
  • 29
    • 58149349958 scopus 로고    scopus 로고
    • Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual information
    • Luo W, Hankenson KD, Woolf PJ (2008) Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual information. BMC bioinformatics 9: 467.
    • (2008) BMC Bioinformatics , vol.9 , pp. 467
    • Luo, W.1    Hankenson, K.D.2    Woolf, P.J.3
  • 30
    • 33644876958 scopus 로고    scopus 로고
    • TRANSFAC and its module TRANSCompel: Transcriptional gene regulation in eukaryotes
    • Matys V, Kel-Margoulis OV, Fricke E, Liebich I, Land S, et al. (2006) TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34: D108-D110.
    • (2006) Nucleic Acids Research , vol.34 , pp. D108-D110
    • Matys, V.1    Kel-Margoulis, O.V.2    Fricke, E.3    Liebich, I.4    Land, S.5
  • 32
    • 33646703069 scopus 로고    scopus 로고
    • Transformed diffuse large B-cell lymphomas with gains of the discontinuous 12q12-14 amplicon display concurrent deregulation of CDK2, CDK4 and GADD153 genes
    • Al-Assar O, Rees-Unwin KS, Menasce LP, Hough RE, Goepel JR, et al. (2006) Transformed diffuse large B-cell lymphomas with gains of the discontinuous 12q12-14 amplicon display concurrent deregulation of CDK2, CDK4 and GADD153 genes. British journal of haematology 133: 612-621.
    • (2006) British Journal of Haematology , vol.133 , pp. 612-621
    • Al-Assar, O.1    Rees-Unwin, K.S.2    Menasce, L.P.3    Hough, R.E.4    Goepel, J.R.5
  • 33
    • 0020680903 scopus 로고
    • Translocation and rearrangements of the c-myc oncogene locus in human undifferentiated B-cell lymphomas
    • Dalla-Favera R, Martinotti S, Gallo RC, Erikson J, Croce CM (1983) Translocation and rearrangements of the c-myc oncogene locus in human undifferentiated B-cell lymphomas. Science 219: 963-967.
    • (1983) Science , vol.219 , pp. 963-967
    • Dalla-Favera, R.1    Martinotti, S.2    Gallo, R.C.3    Erikson, J.4    Croce, C.M.5
  • 34
    • 84892623549 scopus 로고    scopus 로고
    • Understanding MYC-driven aggressive B-cell lymphomas: Pathogenesis and classification
    • Ott G, Rosenwald A, Campo E (2013) Understanding MYC-driven aggressive B-cell lymphomas: pathogenesis and classification. Blood 122: 3884-3891.
    • (2013) Blood , vol.122 , pp. 3884-3891
    • Ott, G.1    Rosenwald, A.2    Campo, E.3
  • 35
    • 77949893848 scopus 로고    scopus 로고
    • Hypoxia-Inducible Factor-1 a Expression Predicts Superior Survival in Patients With Diffuse Large B-Cell Lymphoma Treated With R-CHOP
    • Evens AM, Sehn LH, Farinha P, Nelson BP, Raji A, et al. (2010) Hypoxia-Inducible Factor-1 a Expression Predicts Superior Survival in Patients With Diffuse Large B-Cell Lymphoma Treated With R-CHOP. Journal of Clinical Oncology 28: 1017-1024.
    • (2010) Journal of Clinical Oncology , vol.28 , pp. 1017-1024
    • Evens, A.M.1    Sehn, L.H.2    Farinha, P.3    Nelson, B.P.4    Raji, A.5
  • 37
    • 0026472154 scopus 로고
    • Role of rel family genes in normal and malignant lymphoid cell growth
    • Gilmore T (1991) Role of rel family genes in normal and malignant lymphoid cell growth. Cancer surveys 15: 69-87.
    • (1991) Cancer Surveys , vol.15 , pp. 69-87
    • Gilmore, T.1
  • 38
    • 0034859101 scopus 로고    scopus 로고
    • The multifaceted roles of glycogen synthase kinase 3beta in cellular signaling
    • Grimes C, Jope R (2001) The multifaceted roles of glycogen synthase kinase 3beta in cellular signaling. Prog Neurobiol 65: 391-426.
    • (2001) Prog Neurobiol , vol.65 , pp. 391-426
    • Grimes, C.1    Jope, R.2
  • 39
    • 70350506572 scopus 로고    scopus 로고
    • The IKK2/NF-κB pathway suppresses MYC-induced lymphomagenesis
    • Klapproth K, Sander S, Marinkovic D, Baumann B, Wirth T (2009) The IKK2/NF-κB pathway suppresses MYC-induced lymphomagenesis. Blood 114: 2448-2458.
    • (2009) Blood , vol.114 , pp. 2448-2458
    • Klapproth, K.1    Sander, S.2    Marinkovic, D.3    Baumann, B.4    Wirth, T.5
  • 41
    • 84880475258 scopus 로고    scopus 로고
    • The CDK Network Linking Cycles of Cell Division and Gene Expression
    • Fisher RP (2012) The CDK Network Linking Cycles of Cell Division and Gene Expression. Genes & cancer 3: 731-738.
    • (2012) Genes & Cancer , vol.3 , pp. 731-738
    • Fisher, R.P.1
  • 42
    • 0028931265 scopus 로고
    • Principles of CDK regulation
    • Morgan DO (1995) Principles of CDK regulation. Nature 374: 131-134.
    • (1995) Nature , vol.374 , pp. 131-134
    • Morgan, D.O.1
  • 44
    • 10944228764 scopus 로고    scopus 로고
    • Critical role of CDK2 for melanoma growth linked to its melanocyte-specific transcriptional regulation by MITF
    • Du J, Widlund HR, Horstmann MA, Ramaswamy S, Ross K, et al. (2004) Critical role of CDK2 for melanoma growth linked to its melanocyte-specific transcriptional regulation by MITF. Cancer cell 6: 565-576.
    • (2004) Cancer Cell , vol.6 , pp. 565-576
    • Du, J.1    Widlund, H.R.2    Horstmann, M.A.3    Ramaswamy, S.4    Ross, K.5
  • 45
    • 85011942155 scopus 로고    scopus 로고
    • Inhibition of cyclin-dependent kinase-2 induces apoptosis in human diffuse large B-cell lymphomas
    • Faber AC, Chiles TC (2007) Inhibition of cyclin-dependent kinase-2 induces apoptosis in human diffuse large B-cell lymphomas. CELL CYCLE-LANDES BIOSCIENCE- 6: 2982.
    • (2007) Cell Cycle-Landes Bioscience , vol.6 , pp. 2982
    • Faber, A.C.1    Chiles, T.C.2
  • 46
    • 84873509649 scopus 로고    scopus 로고
    • Constitutive CCND1/CDK2 activity substitutes for p53 loss, or MYC or oncogenic RAS expression in the transformation of human mammary epithelial cells
    • Junk DJ, Cipriano R, Stampfer M, Jackson MW (2013) Constitutive CCND1/CDK2 activity substitutes for p53 loss, or MYC or oncogenic RAS expression in the transformation of human mammary epithelial cells. PloS one 8: e53776.
    • (2013) PloS One , vol.8 , pp. e53776
    • Junk, D.J.1    Cipriano, R.2    Stampfer, M.3    Jackson, M.W.4
  • 48
    • 84865792218 scopus 로고    scopus 로고
    • High-mobility group A1 protein inhibits p53-mediated intrinsic apoptosis by interacting with Bcl-2 at mitochondria
    • Esposito F, Tornincasa M, Federico A, Chiappetta G, Pierantoni G, et al. (2012) High-mobility group A1 protein inhibits p53-mediated intrinsic apoptosis by interacting with Bcl-2 at mitochondria. Cell death & disease 3: e383.
    • (2012) Cell Death & Disease , vol.3 , pp. e383
    • Esposito, F.1    Tornincasa, M.2    Federico, A.3    Chiappetta, G.4    Pierantoni, G.5
  • 49
  • 50
    • 34347351282 scopus 로고    scopus 로고
    • Mdm2 is required for inhibition of Cdk2 activity by p21, thereby contributing to p53-dependent cell cycle arrest
    • Giono LE, Manfredi JJ (2007) Mdm2 is required for inhibition of Cdk2 activity by p21, thereby contributing to p53-dependent cell cycle arrest. Molecular and cellular biology 27: 4166-4178.
    • (2007) Molecular and Cellular Biology , vol.27 , pp. 4166-4178
    • Giono, L.E.1    Manfredi, J.J.2
  • 53
    • 0029133520 scopus 로고
    • Phosphorylation and activation of the DNA binding activity of purified Stat1 by the Janus protein-tyrosine kinases and the epidermal growth factor receptor
    • Quelle FW, Thierfelder W, Witthuhn BA, Tang B, Cohen S, et al. (1995) Phosphorylation and activation of the DNA binding activity of purified Stat1 by the Janus protein-tyrosine kinases and the epidermal growth factor receptor. Journal of Biological Chemistry 270: 20775-20780.
    • (1995) Journal of Biological Chemistry , vol.270 , pp. 20775-20780
    • Quelle, F.W.1    Thierfelder, W.2    Witthuhn, B.A.3    Tang, B.4    Cohen, S.5
  • 54
    • 0043175471 scopus 로고    scopus 로고
    • Identification and characterization of signal transducer and activator of transcription 3 recruitment sites within the epidermal growth factor receptor
    • Shao H, Cheng HY, Cook RG, Tweardy DJ (2003) Identification and characterization of signal transducer and activator of transcription 3 recruitment sites within the epidermal growth factor receptor. Cancer research 63: 3923-3930.
    • (2003) Cancer Research , vol.63 , pp. 3923-3930
    • Shao, H.1    Cheng, H.Y.2    Cook, R.G.3    Tweardy, D.J.4
  • 56
    • 1642382817 scopus 로고    scopus 로고
    • Forkhead box M1B transcriptional activity requires binding of Cdk-cyclin complexes for phosphorylation-dependent recruitment of p300/CBP coactivators
    • Major ML, Lepe R, Costa RH (2004) Forkhead box M1B transcriptional activity requires binding of Cdk-cyclin complexes for phosphorylation-dependent recruitment of p300/CBP coactivators. Molecular and cellular biology 24: 2649-2661.
    • (2004) Molecular and Cellular Biology , vol.24 , pp. 2649-2661
    • Major, M.L.1    Lepe, R.2    Costa, R.H.3
  • 57
    • 77953255983 scopus 로고    scopus 로고
    • A human B-cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers
    • Lefebvre C, Rajbhandari P, Alvarez MJ, Bandaru P, Lim WK, et al. (2010) A human B-cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers. Mol Syst Biol 6: 377.
    • (2010) Mol Syst Biol , vol.6 , pp. 377
    • Lefebvre, C.1    Rajbhandari, P.2    Alvarez, M.J.3    Bandaru, P.4    Lim, W.K.5
  • 58
    • 84864402194 scopus 로고    scopus 로고
    • Leveraging models of cell regulation and GWAS data in integrative network-based association studies
    • Califano A, Butte AJ, Friend S, Ideker T, Schadt E (2012) Leveraging models of cell regulation and GWAS data in integrative network-based association studies. Nat Genet 44: 841-847.
    • (2012) Nat Genet , vol.44 , pp. 841-847
    • Califano, A.1    Butte, A.J.2    Friend, S.3    Ideker, T.4    Schadt, E.5
  • 59
    • 84891913160 scopus 로고    scopus 로고
    • Direct Reversal of Glucocorticoid Resistance by AKT Inhibition in Acute Lymphoblastic Leukemia
    • Piovan E, Yu J, Tosello V, Herranz D, Ambesi-Impiombato A, et al. (2013) Direct Reversal of Glucocorticoid Resistance by AKT Inhibition in Acute Lymphoblastic Leukemia. Cancer Cell 24: 766-776.
    • (2013) Cancer Cell , vol.24 , pp. 766-776
    • Piovan, E.1    Yu, J.2    Tosello, V.3    Herranz, D.4    Ambesi-Impiombato, A.5
  • 60
    • 84862776920 scopus 로고    scopus 로고
    • Reverse engineering of TLX oncogenic transcriptional networks identifies RUNX1 as tumor suppressor in T-ALL
    • Della Gatta G, Palomero T, Perez-Garcia A, Ambesi-Impiombato A, Bansal M, et al. (2012) Reverse engineering of TLX oncogenic transcriptional networks identifies RUNX1 as tumor suppressor in T-ALL. Nat Med 18: 436-440.
    • (2012) Nat Med , vol.18 , pp. 436-440
    • Della Gatta, G.1    Palomero, T.2    Perez-Garcia, A.3    Ambesi-Impiombato, A.4    Bansal, M.5
  • 61
    • 80054689794 scopus 로고    scopus 로고
    • An Extensive MicroRNA-Mediated Network of RNA-RNA Interactions Regulates Established Oncogenic Pathways in Glioblastoma
    • Sumazin P, Yang X, Chiu HS, Chung WJ, Iyer A, et al. (2011) An Extensive MicroRNA-Mediated Network of RNA-RNA Interactions Regulates Established Oncogenic Pathways in Glioblastoma. Cell 147: 307.
    • (2011) Cell , vol.147 , pp. 307
    • Sumazin, P.1    Yang, X.2    Chiu, H.S.3    Chung, W.J.4    Iyer, A.5
  • 63
    • 84879435511 scopus 로고    scopus 로고
    • hARACNe: Improving the accuracy of regulatory model reverse engineering via higher-order data processing inequality tests
    • Jang IS, Margolin A, Califano A (2013) hARACNe: improving the accuracy of regulatory model reverse engineering via higher-order data processing inequality tests. Interface focus 3: 20130011.
    • (2013) Interface Focus , vol.3 , pp. 20130011
    • Jang, I.S.1    Margolin, A.2    Califano, A.3
  • 66
    • 54949156075 scopus 로고    scopus 로고
    • Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks
    • Reverter A, Chan EK (2008) Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks. Bioinformatics 24: 2491-2497.
    • (2008) Bioinformatics , vol.24 , pp. 2491-2497
    • Reverter, A.1    Chan, E.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.