-
1
-
-
19344372271
-
Systems biology: Its practice and challenges
-
Aderem A (2005) Systems biology: Its practice and challenges. Cell 121: 511-513.
-
(2005)
Cell
, vol.121
, pp. 511-513
-
-
Aderem, A.1
-
2
-
-
16844376909
-
Reverse engineering of regulatory networks in human B cells
-
Basso K, Margolin AA, Stolovitzky G, Klein U, Dalla-Favera R, et al. (2005) Reverse engineering of regulatory networks in human B cells. Nat Genet 37: 382-390.
-
(2005)
Nat Genet
, vol.37
, pp. 382-390
-
-
Basso, K.1
Margolin, A.A.2
Stolovitzky, G.3
Klein, U.4
Dalla-Favera, R.5
-
3
-
-
1942453302
-
Predicting gene expression from sequence
-
Beer MA, Tavazoie S (2004) Predicting gene expression from sequence. Cell 117: 185-198.
-
(2004)
Cell
, vol.117
, pp. 185-198
-
-
Beer, M.A.1
Tavazoie, S.2
-
4
-
-
0037453009
-
Integrating regulatory motif discovery and genome-wide expression analysis
-
Conlon EM, Liu XS, Lieb JD, Liu JS (2003) Integrating regulatory motif discovery and genome-wide expression analysis. Proc Natl Acad Sci U S A 100: 3339-3344.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 3339-3344
-
-
Conlon, E.M.1
Liu, X.S.2
Lieb, J.D.3
Liu, J.S.4
-
5
-
-
0036683181
-
Linking the genes: Inferring quantitative gene networks from microarray data
-
de la Fuente A, Brazhnik P, Mendes P (2002) Linking the genes: Inferring quantitative gene networks from microarray data. Trends Genet 18: 395-398.
-
(2002)
Trends Genet
, vol.18
, pp. 395-398
-
-
de la Fuente, A.1
Brazhnik, P.2
Mendes, P.3
-
6
-
-
21444452397
-
Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks
-
di Bernardo D, Thompson MJ, Gardner TS, Chobot SE, Eastwood EL, et al. (2005) Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks. Nat Biotechnol 23: 377-383.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 377-383
-
-
di Bernardo, D.1
Thompson, M.J.2
Gardner, T.S.3
Chobot, S.E.4
Eastwood, E.L.5
-
8
-
-
3042588848
-
Growing genetic regulatory networks from seed genes
-
Hashimoto RF, Kim S, Shmulevich I, Zhang W, Bittner ML, et al. (2004) Growing genetic regulatory networks from seed genes. Bioinformatics 20: 1241-1247.
-
(2004)
Bioinformatics
, vol.20
, pp. 1241-1247
-
-
Hashimoto, R.F.1
Kim, S.2
Shmulevich, I.3
Zhang, W.4
Bittner, M.L.5
-
9
-
-
0036789922
-
Untangling the wires: A strategy to trace functional interactions in signaling and gene networks
-
Kholodenko BN, Kiyatkin A, Bruggeman FJ, Sontag E, Westerhoff HV, et al. (2002) Untangling the wires: A strategy to trace functional interactions in signaling and gene networks. Proc Natl Acad Sci U S A 99: 12841-12846.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 12841-12846
-
-
Kholodenko, B.N.1
Kiyatkin, A.2
Bruggeman, F.J.3
Sontag, E.4
Westerhoff, H.V.5
-
10
-
-
0345824737
-
Network component analysis: Reconstruction of regulatory signals in biological systems
-
Liao JC, Boscolo R, Yang YL, Tran LM, Sabatti C, et al. (2003) Network component analysis: Reconstruction of regulatory signals in biological systems. Proc Natl Acad Sci U S A 100: 15522-15527.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 15522-15527
-
-
Liao, J.C.1
Boscolo, R.2
Yang, Y.L.3
Tran, L.M.4
Sabatti, C.5
-
11
-
-
0142179209
-
Prediction of regulatory networks: Genome-wide identification of transcription factor targets from gene expression data
-
Qian J, Lin J, Luscombe NM, Yu H, Gerstein M (2003) Prediction of regulatory networks: Genome-wide identification of transcription factor targets from gene expression data. Bioinformatics 19: 1917-1926.
-
(2003)
Bioinformatics
, vol.19
, pp. 1917-1926
-
-
Qian, J.1
Lin, J.2
Luscombe, N.M.3
Yu, H.4
Gerstein, M.5
-
12
-
-
0036678794
-
Assigning numbers to the arrows: Parameterizing a gene regulation network by using accurate expression kinetics
-
Ronen M, Rosenberg R, Shraiman BI, Alon U (2002) Assigning numbers to the arrows: Parameterizing a gene regulation network by using accurate expression kinetics. Proc Natl Acad Sci U S A 99: 10555-10560.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 10555-10560
-
-
Ronen, M.1
Rosenberg, R.2
Shraiman, B.I.3
Alon, U.4
-
13
-
-
4444352289
-
Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data
-
Schmitt WA Jr., Raab RM, Stephanopoulos G (2004) Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data. Genome Res 14: 1654-1663.
-
(2004)
Genome Res
, vol.14
, pp. 1654-1663
-
-
Schmitt Jr., W.A.1
Raab, R.M.2
Stephanopoulos, G.3
-
14
-
-
0037941585
-
Module networks: Identifying regulatory modules and their condition-specific regulators from gene expression data
-
Segal E, Shapira M, Regev A, Pe'er D, Botstein D, et al. (2003) Module networks: Identifying regulatory modules and their condition-specific regulators from gene expression data. Nat Genet 34: 166-176.
-
(2003)
Nat Genet
, vol.34
, pp. 166-176
-
-
Segal, E.1
Shapira, M.2
Regev, A.3
Pe'er, D.4
Botstein, D.5
-
15
-
-
0033028596
-
Systematic determination of genetic network architecture
-
Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM (1999) Systematic determination of genetic network architecture. Nat Genet 22: 281-285.
-
(1999)
Nat Genet
, vol.22
, pp. 281-285
-
-
Tavazoie, S.1
Hughes, J.D.2
Campbell, M.J.3
Cho, R.J.4
Church, G.M.5
-
16
-
-
0037687416
-
Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling
-
Tegner J, Yeung MK, Hasty J, Collins JJ (2003) Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling. Proc Natl Acad Sci U S A 100: 5944-5949.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 5944-5949
-
-
Tegner, J.1
Yeung, M.K.2
Hasty, J.3
Collins, J.J.4
-
17
-
-
32544457104
-
Least absolute regression network analysis of the murine osteoblast differentiation network
-
van Someren EP, Vaes BL, Steegenga WT, Sijbers AM, Dechering KJ, et al. (2006) Least absolute regression network analysis of the murine osteoblast differentiation network. Bioinformatics 22: 477-484.
-
(2006)
Bioinformatics
, vol.22
, pp. 477-484
-
-
van Someren, E.P.1
Vaes, B.L.2
Steegenga, W.T.3
Sijbers, A.M.4
Dechering, K.J.5
-
18
-
-
33747813561
-
The Inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
-
Bonneau R, Reiss DJ, Shannon P, Facciotti M, Hood L, et al. (2006) The Inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo. Genome Biol 7: R36.
-
(2006)
Genome Biol
, vol.7
-
-
Bonneau, R.1
Reiss, D.J.2
Shannon, P.3
Facciotti, M.4
Hood, L.5
-
19
-
-
4544352942
-
Transcriptional regulatory code of a eukaryotic genome
-
Harbison CT, Gordon DB, Lee TI, Rinaldi NJ, Macisaac KD, et al. (2004) Transcriptional regulatory code of a eukaryotic genome. Nature 431: 99-104.
-
(2004)
Nature
, vol.431
, pp. 99-104
-
-
Harbison, C.T.1
Gordon, D.B.2
Lee, T.I.3
Rinaldi, N.J.4
Macisaac, K.D.5
-
20
-
-
0037174671
-
Transcriptional regulatory networks in Saccharomyces cerevisiae
-
Lee TI, Rinaldi NJ, Robert F, Odom DT, Bar-Joseph Z, et al. (2002) Transcriptional regulatory networks in Saccharomyces cerevisiae. Science 298: 799-804.
-
(2002)
Science
, vol.298
, pp. 799-804
-
-
Lee, T.I.1
Rinaldi, N.J.2
Robert, F.3
Odom, D.T.4
Bar-Joseph, Z.5
-
21
-
-
12344318183
-
Making the most of it: Pathway reconstruction and integrative simulation using the data at hand
-
Rice JJ, Stolovitzky G (2004) Making the most of it: Pathway reconstruction and integrative simulation using the data at hand. Drug Discovery Today: BioSilico 2: 70-77.
-
(2004)
Drug Discovery Today: BioSilico
, vol.2
, pp. 70-77
-
-
Rice, J.J.1
Stolovitzky, G.2
-
22
-
-
4644326931
-
Genomic analysis of regulatory network dynamics reveals large topological changes
-
Luscombe NM, Babu MM, Yu H, Snyder M, Teichmann SA, et al. (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431: 308-312.
-
(2004)
Nature
, vol.431
, pp. 308-312
-
-
Luscombe, N.M.1
Babu, M.M.2
Yu, H.3
Snyder, M.4
Teichmann, S.A.5
-
23
-
-
0035805255
-
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
-
Ideker T, Thorsson V, Ranish JA, Christmas R, Buhler J, et al. (2001) Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science 292: 929-934.
-
(2001)
Science
, vol.292
, pp. 929-934
-
-
Ideker, T.1
Thorsson, V.2
Ranish, J.A.3
Christmas, R.4
Buhler, J.5
-
25
-
-
0036366689
-
Combining location and expression data for principled discovery of genetic regulatory network models
-
Hartemink AJ, Gifford DK, Jaakkola TS, Young RA (2002) Combining location and expression data for principled discovery of genetic regulatory network models. Pac Symp Biocomput: 437-449.
-
(2002)
Pac Symp Biocomput
, pp. 437-449
-
-
Hartemink, A.J.1
Gifford, D.K.2
Jaakkola, T.S.3
Young, R.A.4
-
26
-
-
10744226222
-
Computational discovery of gene modules and regulatory networks
-
Bar-Joseph Z, Gerber GK, Lee TI, Rinaldi NJ, Yoo JY, et al. (2003) Computational discovery of gene modules and regulatory networks. Nat Biotechnol 21: 1337-1342.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 1337-1342
-
-
Bar-Joseph, Z.1
Gerber, G.K.2
Lee, T.I.3
Rinaldi, N.J.4
Yoo, J.Y.5
-
27
-
-
33644873438
-
-
Salgado H, Gama-Castro S, Peralta-Gil M, Diaz-Peredo E, Sanchez-Solano F, et al, 2006) RegulonDB version 5.0, Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. Nucleic Acids Res 34: D394-397
-
Salgado H, Gama-Castro S, Peralta-Gil M, Diaz-Peredo E, Sanchez-Solano F, et al. (2006) RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. Nucleic Acids Res 34: D394-397.
-
-
-
-
28
-
-
0033655775
-
Mutual information relevance networks: Functional genomic clustering using pairwise entropy measurements
-
Butte AJ, Kohane IS (2000) Mutual information relevance networks: Functional genomic clustering using pairwise entropy measurements. Pac Symp Biocomput: 418-429.
-
(2000)
Pac Symp Biocomput
, pp. 418-429
-
-
Butte, A.J.1
Kohane, I.S.2
-
29
-
-
0034710924
-
Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks
-
Butte AJ, Tamayo P, Slonim D, Golub TR, Kohane IS (2000) Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks. Proc Natl Acad Sci U S A 97: 12182-12186.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 12182-12186
-
-
Butte, A.J.1
Tamayo, P.2
Slonim, D.3
Golub, T.R.4
Kohane, I.S.5
-
30
-
-
33947305781
-
ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context
-
Margolin AA, Nemenman I, Basso K, Wiggins C, Stolovitzky G, et al. (2006) ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. BMC Bioinformatics 7 Suppl 1: S7.
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.SUPPL. 1
-
-
Margolin, A.A.1
Nemenman, I.2
Basso, K.3
Wiggins, C.4
Stolovitzky, G.5
-
32
-
-
34548696055
-
Independent coordinates for strange attractors from mutual information
-
Fraser AM, Swinney HL (1986) Independent coordinates for strange attractors from mutual information. Phy Rev A 33: 1134-1140.
-
(1986)
Phy Rev A
, vol.33
, pp. 1134-1140
-
-
Fraser, A.M.1
Swinney, H.L.2
-
33
-
-
0002952698
-
Significance testing of information theoretic functionals
-
Roulston MS (1997) Significance testing of information theoretic functionals. Physica D 110: 62-66.
-
(1997)
Physica D
, vol.110
, pp. 62-66
-
-
Roulston, M.S.1
-
34
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
Bailey TL, Elkan C (1994) Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 2: 28-36.
-
(1994)
Proc Int Conf Intell Syst Mol Biol
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
35
-
-
0038401982
-
Identification of additional genes belonging to the LexA regulon in Escherichia coli
-
Fernandez De Henestrosa AR, Ogi T, Aoyagi S, Chafin D, Hayes JJ, et al. (2000) Identification of additional genes belonging to the LexA regulon in Escherichia coli. Mol Microbiol 35: 1560-1572.
-
(2000)
Mol Microbiol
, vol.35
, pp. 1560-1572
-
-
Fernandez De Henestrosa, A.R.1
Ogi, T.2
Aoyagi, S.3
Chafin, D.4
Hayes, J.J.5
-
36
-
-
13444262374
-
EcoCyc: A comprehensive database resource for Escherichia coli
-
Keseler IM, Collado-Vides J, Gama-Castro S, Ingraham J, Paley S, et al. (2005) EcoCyc: A comprehensive database resource for Escherichia coli. Nucleic Acids Res 33: D334-337.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Keseler, I.M.1
Collado-Vides, J.2
Gama-Castro, S.3
Ingraham, J.4
Paley, S.5
-
37
-
-
0003208241
-
Uptake and metabolism of iron and molybdenum
-
Neidhardt FC, Curtiss R, editors, Washington D. C, ASM Press. pp
-
Earheart CF (1996) Uptake and metabolism of iron and molybdenum. In: Neidhardt FC, Curtiss R, editors. Escherichia coli and Salmonella: Cellular and molecular biology. Washington (D. C.): ASM Press. pp. 1075-1090.
-
(1996)
Escherichia coli and Salmonella: Cellular and molecular biology
, pp. 1075-1090
-
-
Earheart, C.F.1
-
38
-
-
0037010152
-
Iron transport and signaling in Escherichia coli
-
Braun V, Braun M (2002) Iron transport and signaling in Escherichia coli. FEBS Lett 529: 78-85.
-
(2002)
FEBS Lett
, vol.529
, pp. 78-85
-
-
Braun, V.1
Braun, M.2
-
39
-
-
0037007079
-
Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle
-
Laub MT, Chen SL, Shapiro L, McAdams HH (2002) Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle. Proc Natl Acad Sci U S A 99: 4632-4637.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 4632-4637
-
-
Laub, M.T.1
Chen, S.L.2
Shapiro, L.3
McAdams, H.H.4
-
40
-
-
0038048325
-
Inferring genetic networks and identifying compound mode of action via expression profiling
-
Gardner TS, di Bernardo D, Lorenz D, Collins JJ (2003) Inferring genetic networks and identifying compound mode of action via expression profiling. Science 301: 102-105.
-
(2003)
Science
, vol.301
, pp. 102-105
-
-
Gardner, T.S.1
di Bernardo, D.2
Lorenz, D.3
Collins, J.J.4
-
41
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97: 6640-6645.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
42
-
-
0041335300
-
Physiological studies of Escherichia coli strain MG1655: Growth defects and apparent cross-regulation of gene expression
-
Soupene E, van Heeswijk WC, Plumbridge J, Stewart V, Bertenthal D, et al. (2003) Physiological studies of Escherichia coli strain MG1655: Growth defects and apparent cross-regulation of gene expression. J Bacteriol 185: 5611-5626.
-
(2003)
J Bacteriol
, vol.185
, pp. 5611-5626
-
-
Soupene, E.1
van Heeswijk, W.C.2
Plumbridge, J.3
Stewart, V.4
Bertenthal, D.5
-
43
-
-
3042741121
-
Engineered riboregulators enable post-transcriptional control of gene expression
-
Isaacs FJ, Dwyer DJ, Ding C, Pervouchine DD, Cantor CR, et al. (2004) Engineered riboregulators enable post-transcriptional control of gene expression. Nat Biotechnol 22: 841-847.
-
(2004)
Nat Biotechnol
, vol.22
, pp. 841-847
-
-
Isaacs, F.J.1
Dwyer, D.J.2
Ding, C.3
Pervouchine, D.D.4
Cantor, C.R.5
-
44
-
-
12344280017
-
Summaries of Affymetrix GeneChip probe level data
-
Irizarry RA, Bolstad BM, Collin F, Cope LM, Hobbs B, et al. (2003) Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res 31: e15.
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Irizarry, R.A.1
Bolstad, B.M.2
Collin, F.3
Cope, L.M.4
Hobbs, B.5
-
45
-
-
10844290766
-
A model-based background adjustment for oligonucleotide expression arrays
-
Wu Z, Irizarry RA, Gentleman R, Martinez-Murillo F, Spencer F (2004) A model-based background adjustment for oligonucleotide expression arrays. J Am Stat Assoc 99: 909-917.
-
(2004)
J Am Stat Assoc
, vol.99
, pp. 909-917
-
-
Wu, Z.1
Irizarry, R.A.2
Gentleman, R.3
Martinez-Murillo, F.4
Spencer, F.5
-
46
-
-
0035793042
-
Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection
-
Li C, Wong WH (2001) Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection. Proc Natl Acad Sci U S A 98: 31-36.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 31-36
-
-
Li, C.1
Wong, W.H.2
-
47
-
-
13244267007
-
Estimating mutual information using B-spline functions-an improved similarity measure for analysing gene expression data
-
Daub CO, Steuer R, Selbig J, Kloska S (2004) Estimating mutual information using B-spline functions-an improved similarity measure for analysing gene expression data. BMC Bioinformatics 5: 118.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 118
-
-
Daub, C.O.1
Steuer, R.2
Selbig, J.3
Kloska, S.4
-
48
-
-
2342648924
-
Integrating high-throughput and computational data elucidates bacterial networks
-
Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO (2004) Integrating high-throughput and computational data elucidates bacterial networks. Nature 429: 92-96.
-
(2004)
Nature
, vol.429
, pp. 92-96
-
-
Covert, M.W.1
Knight, E.M.2
Reed, J.L.3
Herrgard, M.J.4
Palsson, B.O.5
-
49
-
-
10744232769
-
Genome-scale analysis of the uses of the Escherichia coli genome: Model-driven analysis of heterogeneous data sets
-
Allen TE, Herrgard MJ, Liu M, Qiu Y, Glasner JD, et al. (2003) Genome-scale analysis of the uses of the Escherichia coli genome: Model-driven analysis of heterogeneous data sets. J Bacteriol 185: 6392-6399.
-
(2003)
J Bacteriol
, vol.185
, pp. 6392-6399
-
-
Allen, T.E.1
Herrgard, M.J.2
Liu, M.3
Qiu, Y.4
Glasner, J.D.5
-
50
-
-
17644376529
-
Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli
-
Haddadin FT, Harcum SW (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli. Biotechnol Bioeng 90: 127-153.
-
(2005)
Biotechnol Bioeng
, vol.90
, pp. 127-153
-
-
Haddadin, F.T.1
Harcum, S.W.2
-
51
-
-
17444364828
-
Amino acid content of recombinant proteins influences the metabolic burden response
-
Bonomo J, Gill RT (2005) Amino acid content of recombinant proteins influences the metabolic burden response. Biotechnol Bioeng 90: 116-126.
-
(2005)
Biotechnol Bioeng
, vol.90
, pp. 116-126
-
-
Bonomo, J.1
Gill, R.T.2
-
52
-
-
11144263144
-
pH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12
-
Maurer LM, Yohannes E, Bondurant SS, Radmacher M, Slonczewski JL (2005) pH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12. J Bacteriol 187: 304-319.
-
(2005)
J Bacteriol
, vol.187
, pp. 304-319
-
-
Maurer, L.M.1
Yohannes, E.2
Bondurant, S.S.3
Radmacher, M.4
Slonczewski, J.L.5
-
53
-
-
2342660218
-
Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655
-
Brokx SJ, Ellison M, Locke T, Bottorff D, Frost L, et al. (2004) Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655. J Bacteriol 186: 3254-3258.
-
(2004)
J Bacteriol
, vol.186
, pp. 3254-3258
-
-
Brokx, S.J.1
Ellison, M.2
Locke, T.3
Bottorff, D.4
Frost, L.5
-
54
-
-
13244289800
-
Genome-wide expression analysis indicates that FNR of Escherichia coli K-12 regulates a large number of genes of unknown function
-
Kang Y, Weber KD, Qiu Y, Kiley PJ, Blattner FR (2005) Genome-wide expression analysis indicates that FNR of Escherichia coli K-12 regulates a large number of genes of unknown function. J Bacteriol 187: 1135-1160.
-
(2005)
J Bacteriol
, vol.187
, pp. 1135-1160
-
-
Kang, Y.1
Weber, K.D.2
Qiu, Y.3
Kiley, P.J.4
Blattner, F.R.5
-
55
-
-
4944228604
-
Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR
-
Herring CD, Blattner FR (2004) Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J Bacteriol 186: 6714-6720.
-
(2004)
J Bacteriol
, vol.186
, pp. 6714-6720
-
-
Herring, C.D.1
Blattner, F.R.2
-
56
-
-
18144396807
-
Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli
-
Liu M, Durfee T, Cabrera JE, Zhao K, Jin DJ, et al. (2005) Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli. J Biol Chem 280: 15921-15927.
-
(2005)
J Biol Chem
, vol.280
, pp. 15921-15927
-
-
Liu, M.1
Durfee, T.2
Cabrera, J.E.3
Zhao, K.4
Jin, D.J.5
|