-
1
-
-
80052906171
-
TBP-related factors: A paradigm of diversity in transcription initiation
-
Akhtar W., Veenstra GJ. 2011. TBP-related factors: a paradigm of diversity in transcription initiation. Cell Biosci 1: 23.
-
(2011)
Cell Biosci
, vol.1
, pp. 23
-
-
Akhtar, W.1
Veenstra, G.J.2
-
2
-
-
58549102472
-
Cis-regulatory networks during development: A view of Drosophila
-
Bonn S., Furlong EEM. 2008. Cis-regulatory networks during development: a view of Drosophila. Curr Opin Genet Dev 18: 513-520.
-
(2008)
Curr Opin Genet Dev
, vol.18
, pp. 513-520
-
-
Bonn, S.1
Furlong, E.E.M.2
-
3
-
-
0033198714
-
The TBP-like factor: An alternative transcription factor in metazoa?
-
Dantonel J.C., Wurtz JM, Poch O, Moras D, Tora L. 1999. The TBP-like factor: an alternative transcription factor in metazoa? Trends Biochem Sci 24: 335-339.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 335-339
-
-
Dantonel, J.C.1
Wurtz, J.M.2
Poch, O.3
Moras, D.4
Tora, L.5
-
4
-
-
0033637859
-
TBP-like factor is required for embryonic RNA polymerase II transcription in C. elegans
-
Dantonel J.C., Quintin S, Lakatos L, Labouesse M, Tora L. 2000. TBP-like factor is required for embryonic RNA polymerase II transcription in C. elegans. Mol Cell 6: 715-722.
-
(2000)
Mol Cell
, vol.6
, pp. 715-722
-
-
Dantonel, J.C.1
Quintin, S.2
Lakatos, L.3
Labouesse, M.4
Tora, L.5
-
5
-
-
23344434100
-
Trypanosomal TBP functions with the multisubunit transcription factor tSNAP to direct splicedleader RNA gene expression
-
Das A., Zhang Q, Palenchar JB, Chatterjee B, Cross GAM, Bellofatto V. 2005. Trypanosomal TBP functions with the multisubunit transcription factor tSNAP to direct splicedleader RNA gene expression. Mol Cell Biol 25: 7314-7322.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 7314-7322
-
-
Das, A.1
Zhang, Q.2
Palenchar, J.B.3
Chatterjee, B.4
Cross, G.A.M.5
Bellofatto, V.6
-
6
-
-
77954763022
-
Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation
-
Goodrich J.A., Tjian R. 2010. Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation. Nat Rev Genet 11: 549-558.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 549-558
-
-
Goodrich, J.A.1
Tjian, R.2
-
7
-
-
79959298162
-
Recent advances in the understanding of archaeal transcription
-
Grohmann D., Werner F. 2011. Recent advances in the understanding of archaeal transcription. Curr Opin Microbiol 14: 328-334.
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 328-334
-
-
Grohmann, D.1
Werner, F.2
-
8
-
-
0037174868
-
A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii
-
Guillebault D., Sasorith S, Derelle E, Wurtz JM, Lozano JC, Bingham S., Tora L, Moreau H. 2002. A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii. J Biol Chem 277: 40881- 40886.
-
(2002)
J Biol Chem
, vol.277
, pp. 40881-40886
-
-
Guillebault, D.1
Sasorith, S.2
Derelle, E.3
Wurtz, J.M.4
Lozano, J.C.5
Bingham, S.6
Tora, L.7
Moreau, H.8
-
9
-
-
51149085210
-
TBP, Mot1, and NC2 establish a regulatory circuit that controls DPE-dependent versus TATAdependent transcription
-
Hsu J.Y., Juven-Gershon T, Marr MT 2nd, Wright KJ, Tjian R, Kadonaga J.T. 2008. TBP, Mot1, and NC2 establish a regulatory circuit that controls DPE-dependent versus TATAdependent transcription. Genes Dev 22: 2353-2358.
-
(2008)
Genes Dev
, vol.22
, pp. 2353-2358
-
-
Hsu, J.Y.1
Juven-Gershon, T.2
Marr, M.T.3
Wright, K.J.4
Tjian, R.5
Kadonaga, J.T.6
-
10
-
-
36249011467
-
Transcription of histone gene cluster by differential corepromoter factors
-
Isogai Y., Keles S, Prestel M, Hochheimer A, Tjian R. 2007. Transcription of histone gene cluster by differential corepromoter factors. Genes Dev 21: 2936-2949.
-
(2007)
Genes Dev
, vol.21
, pp. 2936-2949
-
-
Isogai, Y.1
Keles, S.2
Prestel, M.3
Hochheimer, A.4
Tjian, R.5
-
11
-
-
54349103510
-
Caudal, a key developmental regulator, is a DPE-specific transcription factor
-
Juven-Gershon T., Hsu JY, Kadonaga JT. 2008. Caudal, a key developmental regulator, is a DPE-specific transcription factor. Genes Dev 22: 2823-2830.
-
(2008)
Genes Dev
, vol.22
, pp. 2823-2830
-
-
Juven-Gershon, T.1
Hsu, J.Y.2
Kadonaga, J.T.3
-
12
-
-
84858444088
-
Perspectives on the RNA polymerase II core promoter
-
Kadonaga J.T. 2012. Perspectives on the RNA polymerase II core promoter. WIREs Dev Biol 1: 40-51.
-
(2012)
WIREs Dev Biol
, vol.1
, pp. 40-51
-
-
Kadonaga, J.T.1
-
13
-
-
0033634868
-
The TBP-like factor CeTLF is required to activate RNA polymerase II transcription during C. elegans embryogenesis
-
Kaltenbach L., Horner MA, Rothman JH, Mango SE. 2000. The TBP-like factor CeTLF is required to activate RNA polymerase II transcription during C. elegans embryogenesis. Mol Cell 6: 705-713.
-
(2000)
Mol Cell
, vol.6
, pp. 705-713
-
-
Kaltenbach, L.1
Horner, M.A.2
Rothman, J.H.3
Mango, S.E.4
-
14
-
-
84907494393
-
Drosophila TRF2 is a preferential core promoter regulator
-
(this issue)
-
Kedmi A., Zehavi Y, Glick Y, Orenstein Y, Ideses D, Wachtel C, Doniger T., Waldman Ben-Asher H, Muster N, Thompson J, et al. 2014. Drosophila TRF2 is a preferential core promoter regulator. Genes Dev 28: (this issue). doi: 10.1101/gad.245670.114.
-
(2014)
Genes Dev
, vol.28
-
-
Kedmi, A.1
Zehavi, Y.2
Glick, Y.3
Orenstein, Y.4
Ideses, D.5
Wachtel, C.6
Doniger, T.7
Waldman Ben-Asher, H.8
Muster, N.9
Thompson, J.10
-
15
-
-
0027504913
-
Crystal structure of a yeast TBP/TATA-box complex
-
Kim Y., Geiger JH, Hahn S, Sigler PB. 1993a. Crystal structure of a yeast TBP/TATA-box complex. Nature 365: 512-520.
-
(1993)
Nature
, vol.365
, pp. 512-520
-
-
Kim, Y.1
Geiger, J.H.2
Hahn, S.3
Sigler, P.B.4
-
16
-
-
0027483012
-
Co-crystal structure of TBP recognizing the minor groove of a TATA element
-
Kim J.L., Nikolov DB, Burley SK. 1993b. Co-crystal structure of TBP recognizing the minor groove of a TATA element. Nature 365: 520-527.
-
(1993)
Nature
, vol.365
, pp. 520-527
-
-
Kim, J.L.1
Nikolov, D.B.2
Burley, S.K.3
-
17
-
-
33749625575
-
Two isoforms of Drosophila TRF2 are involved in embryonic development, premeiotic chromatin condensation, and proper differentiation of germ cells of both sexes
-
Kopytova D.V., Krasnov AN, Kopantceva MR, Nabirochkina EN, Nikolenko JV, Maksimenko O, Kurshakova MM, Lebedeva L.A., Yerokhin MM, Simonova OB, et al. 2006. Two isoforms of Drosophila TRF2 are involved in embryonic development, premeiotic chromatin condensation, and proper differentiation of germ cells of both sexes. Mol Cell Biol 26: 7492-7505.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 7492-7505
-
-
Kopytova, D.V.1
Krasnov, A.N.2
Kopantceva, M.R.3
Nabirochkina, E.N.4
Nikolenko, J.V.5
Maksimenko, O.6
Kurshakova, M.M.7
Lebedeva, L.A.8
Yerokhin, M.M.9
Simonova, O.B.10
-
18
-
-
0031562901
-
The 2.1-Å crystal structure of an archaeal preinitiation complex: TATAbox- binding protein/transcription factor (II)B core/TATA-box
-
Kosa P.F., Ghosh G, DeDecker BS, Sigler PB. 1997. The 2.1-Å crystal structure of an archaeal preinitiation complex: TATAbox- binding protein/transcription factor (II)B core/TATA-box. Proc Natl Acad Sci 94: 6042-6047.
-
(1997)
Proc Natl Acad Sci
, vol.94
, pp. 6042-6047
-
-
Kosa, P.F.1
Ghosh, G.2
DeDecker, B.S.3
Sigler, P.B.4
-
19
-
-
0033532156
-
Transcriptional functions of a new mammalian TATA-binding protein-related factor
-
Maldonado E. 1999. Transcriptional functions of a new mammalian TATA-binding protein-related factor. J Biol Chem 274: 12963-12966.
-
(1999)
J Biol Chem
, vol.274
, pp. 12963-12966
-
-
Maldonado, E.1
-
20
-
-
0035265970
-
Late arrest of spermiogenesis and germ cell apoptosis in mice lacking the TBP-like TLF/TRF2 gene
-
Martianov I., Fimia GM, Dierich A, Parvinen M, Sassone-Corsi P, Davidson I. 2001. Late arrest of spermiogenesis and germ cell apoptosis in mice lacking the TBP-like TLF/TRF2 gene. Mol Cell 7: 509-515.
-
(2001)
Mol Cell
, vol.7
, pp. 509-515
-
-
Martianov, I.1
Fimia, G.M.2
Dierich, A.3
Parvinen, M.4
Sassone-Corsi, P.5
Davidson, I.6
-
21
-
-
0032722208
-
A human TATA binding proteinrelated protein with altered DNA binding specificity inhibits transcription from multiple promoters and activators
-
Moore P.A., Ozer J, Salunek M, Jan G, Zerby D, Campbell S, Lieberman P.M. 1999. A human TATA binding proteinrelated protein with altered DNA binding specificity inhibits transcription from multiple promoters and activators. Mol Cell Biol 19: 7610-7620.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 7610-7620
-
-
Moore, P.A.1
Ozer, J.2
Salunek, M.3
Jan, G.4
Zerby, D.5
Campbell, S.6
Lieberman, P.M.7
-
22
-
-
0035916361
-
TBP is not universally required for zygotic RNA polymerase II transcription in zebrafish
-
Müller F., Lakatos L, Dantonel J, Strähle U, Tora L. 2001. TBP is not universally required for zygotic RNA polymerase II transcription in zebrafish. Curr Biol 11: 282-287.
-
(2001)
Curr Biol
, vol.11
, pp. 282-287
-
-
Müller, F.1
Lakatos, L.2
Dantonel, J.3
Strähle, U.4
Tora, L.5
-
23
-
-
0031024494
-
Drosophila TAFII230 and the transcriptional activator VP16 bind competitively to the TATA box-binding domain of the TATA box-binding protein
-
Nishikawa J.I., Kokubo T, Horikoshi M, Roeder RG, Nakatani Y. 1997. Drosophila TAFII230 and the transcriptional activator VP16 bind competitively to the TATA box-binding domain of the TATA box-binding protein. Proc Natl Acad Sci 94: 85-90.
-
(1997)
Proc Natl Acad Sci
, vol.94
, pp. 85-90
-
-
Nishikawa, J.I.1
Kokubo, T.2
Horikoshi, M.3
Roeder, R.G.4
Nakatani, Y.5
-
24
-
-
0033081244
-
Identification of a mouse TBP-like protein (TLP) distantly related to the Drosophila TBP-related factor
-
Ohbayashi T., Makino Y, Tamura TA. 1999. Identification of a mouse TBP-like protein (TLP) distantly related to the Drosophila TBP-related factor. Nucleic Acids Res 27: 750-755.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 750-755
-
-
Ohbayashi, T.1
Makino, Y.2
Tamura, T.A.3
-
25
-
-
77956842987
-
The TCT motif, a key component of an RNA polymerase II transcription system for the translational machinery
-
Parry T.J., Theisen JW, Hsu JY, Wang YL, Corcoran DL, Eustice M, Ohler U, Kadonaga JT. 2010. The TCT motif, a key component of an RNA polymerase II transcription system for the translational machinery. Genes Dev 24: 2013- 2018.
-
(2010)
Genes Dev
, vol.24
, pp. 2013-2018
-
-
Parry, T.J.1
Theisen, J.W.2
Hsu, J.Y.3
Wang, Y.L.4
Corcoran, D.L.5
Eustice, M.6
Ohler, U.7
Kadonaga, J.T.8
-
26
-
-
0033573008
-
TATA element recognition by the TATA box-binding protein has been conserved throughout evolution
-
Patikoglou G.A., Kim JL, Sun LP, Yang SH, Kodadek T, Burley SK. 1999. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes Dev 13: 3217-3230.
-
(1999)
Genes Dev
, vol.13
, pp. 3217-3230
-
-
Patikoglou, G.A.1
Kim, J.L.2
Sun, L.P.3
Yang, S.H.4
Kodadek, T.5
Burley, S.K.6
-
27
-
-
0033608978
-
TATA boxbinding protein (TBP)-related factor 2 (TRF2), a third member of the TBP family
-
Rabenstein M.D., Zhou S, Lis JT, Tjian R. 1999. TATA boxbinding protein (TBP)-related factor 2 (TRF2), a third member of the TBP family. Proc Natl Acad Sci 96: 4791-4796.
-
(1999)
Proc Natl Acad Sci
, vol.96
, pp. 4791-4796
-
-
Rabenstein, M.D.1
Zhou, S.2
Lis, J.T.3
Tjian, R.4
-
28
-
-
6344251628
-
Functional characterization of a Trypanosoma brucei TATA-binding protein-related factor points to a universal regulator of transcription in trypanosomes
-
Ruan J.P., Arhin GK, Ullu E, Tschudi C. 2004. Functional characterization of a Trypanosoma brucei TATA-binding protein-related factor points to a universal regulator of transcription in trypanosomes. Mol Cell Biol 24: 9610- 9618.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 9610-9618
-
-
Ruan, J.P.1
Arhin, G.K.2
Ullu, E.3
Tschudi, C.4
-
29
-
-
79955447300
-
Evolutionary crossroads in developmental biology: Cnidaria
-
Technau U., Steele RE. 2011. Evolutionary crossroads in developmental biology: cnidaria. Development 138: 1447-1458.
-
(2011)
Development
, vol.138
, pp. 1447-1458
-
-
Technau, U.1
Steele, R.E.2
-
30
-
-
0033598778
-
Human TATAbinding protein-related factor-2 (hTRF2) stably associates with hTFIIA in HeLa cells
-
Teichmann M., Wang Z, Martinez E, Tjernberg A, Zhang D, Vollmer F., Chait BT, Roeder RG. 1999. Human TATAbinding protein-related factor-2 (hTRF2) stably associates with hTFIIA in HeLa cells. Proc Natl Acad Sci 96: 13720- 13725.
-
(1999)
Proc Natl Acad Sci
, vol.96
, pp. 13720-13725
-
-
Teichmann, M.1
Wang, Z.2
Martinez, E.3
Tjernberg, A.4
Zhang, D.5
Vollmer, F.6
Chait, B.T.7
Roeder, R.G.8
-
31
-
-
33747881750
-
The general transcription machinery and general cofactors
-
Thomas M.C., Chiang CM. 2006. The general transcription machinery and general cofactors. Crit Rev Biochem Mol Biol 41: 105-178.
-
(2006)
Crit Rev Biochem Mol Biol
, vol.41
, pp. 105-178
-
-
Thomas, M.C.1
Chiang, C.M.2
-
32
-
-
0034704187
-
Distinct roles for TBP and TBP-like factor in early embryonic gene transcription in Xenopus
-
Veenstra G.J., Weeks DL, Wolffe AP. 2000. Distinct roles for TBP and TBP-like factor in early embryonic gene transcription in Xenopus. Science 290: 2312-2315.
-
(2000)
Science
, vol.290
, pp. 2312-2315
-
-
Veenstra, G.J.1
Weeks, D.L.2
Wolffe, A.P.3
-
33
-
-
84904332607
-
TRF2, but not TBP, mediates the transcription of ribosomal protein genes
-
Wang Y.L., Duttke SHC, Chen K, Johnston J, Kassavetis GA, Zeitlinger J., Kadonaga JT. 2014. TRF2, but not TBP, mediates the transcription of ribosomal protein genes. Genes Dev 28: 1550-1555.
-
(2014)
Genes Dev
, vol.28
, pp. 1550-1555
-
-
Wang, Y.L.1
Duttke, S.H.C.2
Chen, K.3
Johnston, J.4
Kassavetis, G.A.5
Zeitlinger, J.6
Kadonaga, J.T.7
-
34
-
-
84899426458
-
Core promoter functions in the regulation of Drosophila Dorsal target genes
-
Zehavi Y., Kuznetsov O, Ovadia-Shochat A, Juven-Gershon T. 2014. Core promoter functions in the regulation of Drosophila Dorsal target genes. J Biol Chem 289: 11993-12004.
-
(2014)
J Biol Chem
, vol.289
, pp. 11993-12004
-
-
Zehavi, Y.1
Kuznetsov, O.2
Ovadia-Shochat, A.3
Juven-Gershon, T.4
-
35
-
-
0035843909
-
Spermiogenesis deficiency in mice lacking the Trf2 gene
-
Zhang D., Penttila TL, Morris PL, Teichmann M, Roeder RG. 2001. Spermiogenesis deficiency in mice lacking the Trf2 gene. Science 292: 1153-1155.
-
(2001)
Science
, vol.292
, pp. 1153-1155
-
-
Zhang, D.1
Penttila, T.L.2
Morris, P.L.3
Teichmann, M.4
Roeder, R.G.5
|