-
1
-
-
18144419337
-
Reassessment of the cost of chronic helmintic infection: a meta-analysis of disability-related outcomes in endemic schistosomiasis
-
15866310
-
King CH, Dickman K, Tisch DJ. Reassessment of the cost of chronic helmintic infection: a meta-analysis of disability-related outcomes in endemic schistosomiasis. Lancet 2005, 365(9470):1561-1569. 10.1016/S0140-6736(05)66457-4, 15866310.
-
(2005)
Lancet
, vol.365
, Issue.9470
, pp. 1561-1569
-
-
King, C.H.1
Dickman, K.2
Tisch, D.J.3
-
2
-
-
33750530413
-
Making sense of the schistosome surface
-
Skelly PJ, Alan Wilson R. Making sense of the schistosome surface. Adv Parasitol 2006, 63:185-284.
-
(2006)
Adv Parasitol
, vol.63
, pp. 185-284
-
-
Skelly, P.J.1
Alan Wilson, R.2
-
3
-
-
33747318180
-
Characterization of immunoglobulin binding by schistosomes
-
16916364
-
McIntosh RS, Jones FM, Dunne DW, McKerrow JH, Pleass RJ. Characterization of immunoglobulin binding by schistosomes. Parasite Immunol 2006, 28(9):407-419. 10.1111/j.1365-3024.2006.00829.x, 16916364.
-
(2006)
Parasite Immunol
, vol.28
, Issue.9
, pp. 407-419
-
-
McIntosh, R.S.1
Jones, F.M.2
Dunne, D.W.3
McKerrow, J.H.4
Pleass, R.J.5
-
4
-
-
79955455700
-
Mapping the binding between the tetraspanin molecule (Sjc23) of Schistosoma japonicum and human non-immune IgG
-
3080413, 21533061
-
Wu C, Cai P, Chang Q, Hao L, Peng S, Sun X, Lu H, Yin J, Jiang N, Chen Q. Mapping the binding between the tetraspanin molecule (Sjc23) of Schistosoma japonicum and human non-immune IgG. PLoS One 2011, 6(4):e19112. 10.1371/journal.pone.0019112, 3080413, 21533061.
-
(2011)
PLoS One
, vol.6
, Issue.4
, pp. e19112
-
-
Wu, C.1
Cai, P.2
Chang, Q.3
Hao, L.4
Peng, S.5
Sun, X.6
Lu, H.7
Yin, J.8
Jiang, N.9
Chen, Q.10
-
5
-
-
44649181028
-
Molecular characterization of Schistosoma japonicum tegument protein tetraspanin-2: sequence variation and possible implications for immune evasion
-
18486598
-
Cai P, Bu L, Wang J, Wang Z, Zhong X, Wang H. Molecular characterization of Schistosoma japonicum tegument protein tetraspanin-2: sequence variation and possible implications for immune evasion. Biochem Biophys Res Commun 2008, 372(1):197-202. 10.1016/j.bbrc.2008.05.042, 18486598.
-
(2008)
Biochem Biophys Res Commun
, vol.372
, Issue.1
, pp. 197-202
-
-
Cai, P.1
Bu, L.2
Wang, J.3
Wang, Z.4
Zhong, X.5
Wang, H.6
-
6
-
-
20244365768
-
Chromosomal differentiation of the Schistosoma japonicum complex
-
10731567
-
Hirai H, Taguchi T, Saitoh Y, Kawanaka M, Sugiyama H, Habe S, Okamoto M, Hirata M, Shimada M, Tiu WU, Lai K, Upatham ES, Agatsuma T. Chromosomal differentiation of the Schistosoma japonicum complex. Int J Parasitol 2000, 30(4):441-452. 10.1016/S0020-7519(99)00186-1, 10731567.
-
(2000)
Int J Parasitol
, vol.30
, Issue.4
, pp. 441-452
-
-
Hirai, H.1
Taguchi, T.2
Saitoh, Y.3
Kawanaka, M.4
Sugiyama, H.5
Habe, S.6
Okamoto, M.7
Hirata, M.8
Shimada, M.9
Tiu, W.U.10
Lai, K.11
Upatham, E.S.12
Agatsuma, T.13
-
7
-
-
67650786530
-
The Schistosoma japonicum genome reveals features of host-parasite interplay
-
3747554, 19606140
-
Zhou Y, Zheng H, Chen Y, Zhang L, Wang K, Guo J, Huang Z, Zhang B, Huang W, Jin K, Dou T, Hasegawa M, Wang L, Zhang Y, Zhou J, Tao L, Cao Z, Li Y, Vinar T, Brejova B, Brown D, Li M, Miller DJ, Blair D, Zhong Y, Chen Z, Liu F, Hu W, Wang ZQ, Zhang QH, et al. The Schistosoma japonicum genome reveals features of host-parasite interplay. Nature 2009, 460(7253):345-351. 10.1038/nature08140, 3747554, 19606140.
-
(2009)
Nature
, vol.460
, Issue.7253
, pp. 345-351
-
-
Zhou, Y.1
Zheng, H.2
Chen, Y.3
Zhang, L.4
Wang, K.5
Guo, J.6
Huang, Z.7
Zhang, B.8
Huang, W.9
Jin, K.10
Dou, T.11
Hasegawa, M.12
Wang, L.13
Zhang, Y.14
Zhou, J.15
Tao, L.16
Cao, Z.17
Li, Y.18
Vinar, T.19
Brejova, B.20
Brown, D.21
Li, M.22
Miller, D.J.23
Blair, D.24
Zhong, Y.25
Chen, Z.26
Liu, F.27
Hu, W.28
Wang, Z.Q.29
Zhang, Q.H.30
more..
-
8
-
-
67650789618
-
The genome of the blood fluke Schistosoma mansoni
-
2756445, 19606141
-
Berriman M, Haas BJ, LoVerde PT, Wilson RA, Dillon GP, Cerqueira GC, Mashiyama ST, Al-Lazikani B, Andrade LF, Ashton PD, Aslett MA, Bartholomeu DC, Blandin G, Caffrey CR, Coghlan A, Coulson R, Day TA, Delcher A, DeMarco R, Djikeng A, Eyre T, Gamble JA, Ghedin E, Gu Y, Hertz-Fowler C, Hirai H, Hirai Y, Houston R, Ivens A, Johnston DA, et al. The genome of the blood fluke Schistosoma mansoni. Nature 2009, 460(7253):352-358. 10.1038/nature08160, 2756445, 19606141.
-
(2009)
Nature
, vol.460
, Issue.7253
, pp. 352-358
-
-
Berriman, M.1
Haas, B.J.2
LoVerde, P.T.3
Wilson, R.A.4
Dillon, G.P.5
Cerqueira, G.C.6
Mashiyama, S.T.7
Al-Lazikani, B.8
Andrade, L.F.9
Ashton, P.D.10
Aslett, M.A.11
Bartholomeu, D.C.12
Blandin, G.13
Caffrey, C.R.14
Coghlan, A.15
Coulson, R.16
Day, T.A.17
Delcher, A.18
DeMarco, R.19
Djikeng, A.20
Eyre, T.21
Gamble, J.A.22
Ghedin, E.23
Gu, Y.24
Hertz-Fowler, C.25
Hirai, H.26
Hirai, Y.27
Houston, R.28
Ivens, A.29
Johnston, D.A.30
more..
-
9
-
-
84862777661
-
Whole-genome sequence of Schistosoma haematobium
-
22246508
-
Young ND, Jex AR, Li B, Liu S, Yang L, Xiong Z, Li Y, Cantacessi C, Hall RS, Xu X, Chen F, Wu X, Zerlotini A, Oliveira G, Hofmann A, Zhang G, Fang X, Kang Y, Campbell BE, Loukas A, Ranganathan S, Rollinson D, Rinaldi G, Brindley PJ, Yang H, Wang J, Gasser RB. Whole-genome sequence of Schistosoma haematobium. Nat Genet 2012, 44(2):221-225. 10.1038/ng.1065, 22246508.
-
(2012)
Nat Genet
, vol.44
, Issue.2
, pp. 221-225
-
-
Young, N.D.1
Jex, A.R.2
Li, B.3
Liu, S.4
Yang, L.5
Xiong, Z.6
Li, Y.7
Cantacessi, C.8
Hall, R.S.9
Xu, X.10
Chen, F.11
Wu, X.12
Zerlotini, A.13
Oliveira, G.14
Hofmann, A.15
Zhang, G.16
Fang, X.17
Kang, Y.18
Campbell, B.E.19
Loukas, A.20
Ranganathan, S.21
Rollinson, D.22
Rinaldi, G.23
Brindley, P.J.24
Yang, H.25
Wang, J.26
Gasser, R.B.27
more..
-
10
-
-
77049106926
-
Schistosome genomes: a wealth of information
-
20083437
-
Webster JP, Oliviera G, Rollinson D, Gower CM. Schistosome genomes: a wealth of information. Trends Parasitol 2010, 26(3):103-106. 10.1016/j.pt.2009.12.006, 20083437.
-
(2010)
Trends Parasitol
, vol.26
, Issue.3
, pp. 103-106
-
-
Webster, J.P.1
Oliviera, G.2
Rollinson, D.3
Gower, C.M.4
-
11
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
18516045
-
Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 2008, 5(7):621-628. 10.1038/nmeth.1226, 18516045.
-
(2008)
Nat Methods
, vol.5
, Issue.7
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
12
-
-
57749195712
-
RNA-Seq: a revolutionary tool for transcriptomics
-
2949280, 19015660
-
Wang Z, Gerstein M, Snyder M. RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 2009, 10(1):57-63. 10.1038/nrg2484, 2949280, 19015660.
-
(2009)
Nat Rev Genet
, vol.10
, Issue.1
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
13
-
-
74949084336
-
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
-
2798830, 19858364
-
Filichkin SA, Priest HD, Givan SA, Shen R, Bryant DW, Fox SE, Wong WK, Mockler TC. Genome-wide mapping of alternative splicing in Arabidopsis thaliana. Genome Res 2010, 20(1):45-58. 10.1101/gr.093302.109, 2798830, 19858364.
-
(2010)
Genome Res
, vol.20
, Issue.1
, pp. 45-58
-
-
Filichkin, S.A.1
Priest, H.D.2
Givan, S.A.3
Shen, R.4
Bryant, D.W.5
Fox, S.E.6
Wong, W.K.7
Mockler, T.C.8
-
14
-
-
77951884076
-
Genome-wide analysis of alternative splicing evolution among Mus subspecies
-
Harr B, Turner LM. Genome-wide analysis of alternative splicing evolution among Mus subspecies. Mol Ecol 2010, 19(Suppl 1):228-239.
-
(2010)
Mol Ecol
, vol.19
, pp. 228-239
-
-
Harr, B.1
Turner, L.M.2
-
15
-
-
84871435525
-
Function of alternative splicing
-
Kelemen O, Convertini P, Zhang Z, Wen Y, Shen M, Falaleeva M, Stamm S. Function of alternative splicing. Gene 2012, 514(1):1-30.
-
(2012)
Gene
, vol.514
, Issue.1
, pp. 1-30
-
-
Kelemen, O.1
Convertini, P.2
Zhang, Z.3
Wen, Y.4
Shen, M.5
Falaleeva, M.6
Stamm, S.7
-
16
-
-
33644874819
-
From genomics to chemical genomics: new developments in KEGG
-
1347464, 16381885
-
Kanehisa M, Goto S, Hattori M, Aoki-Kinoshita KF, Itoh M, Kawashima S, Katayama T, Araki M, Hirakawa M. From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Res 2006, 34(Database issue):D354-D357. 1347464, 16381885.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. D354-D357
-
-
Kanehisa, M.1
Goto, S.2
Hattori, M.3
Aoki-Kinoshita, K.F.4
Itoh, M.5
Kawashima, S.6
Katayama, T.7
Araki, M.8
Hirakawa, M.9
-
17
-
-
0013394889
-
Mechanisms of alternative pre-messenger RNA splicing
-
12626338
-
Black DL. Mechanisms of alternative pre-messenger RNA splicing. Annu Rev Biochem 2003, 72:291-336. 10.1146/annurev.biochem.72.121801.161720, 12626338.
-
(2003)
Annu Rev Biochem
, vol.72
, pp. 291-336
-
-
Black, D.L.1
-
18
-
-
18344364099
-
Understanding alternative splicing: towards a cellular code
-
15956978
-
Matlin AJ, Clark F, Smith CW. Understanding alternative splicing: towards a cellular code. Nat Rev Mol Cell Biol 2005, 6(5):386-398. 10.1038/nrm1645, 15956978.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, Issue.5
, pp. 386-398
-
-
Matlin, A.J.1
Clark, F.2
Smith, C.W.3
-
19
-
-
50949105626
-
A general definition and nomenclature for alternative splicing events
-
2467475, 18688268
-
Sammeth M, Foissac S, Guigo R. A general definition and nomenclature for alternative splicing events. PLoS Comput Biol 2008, 4(8):e1000147. 10.1371/journal.pcbi.1000147, 2467475, 18688268.
-
(2008)
PLoS Comput Biol
, vol.4
, Issue.8
, pp. e1000147
-
-
Sammeth, M.1
Foissac, S.2
Guigo, R.3
-
20
-
-
77955132004
-
Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts
-
20606017
-
DeMarco R, Mathieson W, Manuel SJ, Dillon GP, Curwen RS, Ashton PD, Ivens AC, Berriman M, Verjovski-Almeida S, Wilson RA. Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts. Genome Res 2010, 20(8):1112-1121. 10.1101/gr.100099.109, 2909574, 20606017.
-
(2010)
Genome Res
, vol.20
, Issue.8
, pp. 1112-1121
-
-
DeMarco, R.1
Mathieson, W.2
Manuel, S.J.3
Dillon, G.P.4
Curwen, R.S.5
Ashton, P.D.6
Ivens, A.C.7
Berriman, M.8
Verjovski-Almeida, S.9
Wilson, R.A.10
-
21
-
-
79953761504
-
Global expression analysis revealed novel gender-specific gene expression features in the blood fluke parasite Schistosoma japonicum
-
3071802, 21494327
-
Piao X, Cai P, Liu S, Hou N, Hao L, Yang F, Wang H, Wang J, Jin Q, Chen Q. Global expression analysis revealed novel gender-specific gene expression features in the blood fluke parasite Schistosoma japonicum. PLoS One 2011, 6(4):e18267. 10.1371/journal.pone.0018267, 3071802, 21494327.
-
(2011)
PLoS One
, vol.6
, Issue.4
, pp. e18267
-
-
Piao, X.1
Cai, P.2
Liu, S.3
Hou, N.4
Hao, L.5
Yang, F.6
Wang, H.7
Wang, J.8
Jin, Q.9
Chen, Q.10
-
22
-
-
76749146937
-
Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum
-
2820009, 20092619
-
Hao L, Cai P, Jiang N, Wang H, Chen Q. Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum. BMC Genomics 2010, 11:55. 10.1186/1471-2164-11-55, 2820009, 20092619.
-
(2010)
BMC Genomics
, vol.11
, pp. 55
-
-
Hao, L.1
Cai, P.2
Jiang, N.3
Wang, H.4
Chen, Q.5
-
23
-
-
80052404366
-
Profiles of small non-coding RNAs in Schistosoma japonicum during development
-
3149011, 21829742
-
Cai P, Hou N, Piao X, Liu S, Liu H, Yang F, Wang J, Jin Q, Wang H, Chen Q. Profiles of small non-coding RNAs in Schistosoma japonicum during development. PLoS Negl Trop Dis 2011, 5(8):e1256. 10.1371/journal.pntd.0001256, 3149011, 21829742.
-
(2011)
PLoS Negl Trop Dis
, vol.5
, Issue.8
, pp. e1256
-
-
Cai, P.1
Hou, N.2
Piao, X.3
Liu, S.4
Liu, H.5
Yang, F.6
Wang, J.7
Jin, Q.8
Wang, H.9
Chen, Q.10
-
24
-
-
84901809295
-
Discovery and confirmation of ligand binding specificities of the Schistosoma japonicum polarity protein scribble
-
4006718, 24784152
-
Cai P, Mu Y, Piao X, Hou N, Liu S, Gao Y, Wang H, Chen Q. Discovery and confirmation of ligand binding specificities of the Schistosoma japonicum polarity protein scribble. PLoS Negl Trop Dis 2014, 8(5):e2837. 10.1371/journal.pntd.0002837, 4006718, 24784152.
-
(2014)
PLoS Negl Trop Dis
, vol.8
, Issue.5
, pp. e2837
-
-
Cai, P.1
Mu, Y.2
Piao, X.3
Hou, N.4
Liu, S.5
Gao, Y.6
Wang, H.7
Chen, Q.8
-
25
-
-
84863053735
-
Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using Deep RNA sequencing
-
3274533, 22347391
-
Xiong J, Lu X, Zhou Z, Chang Y, Yuan D, Tian M, Wang L, Fu C, Orias E, Miao W. Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using Deep RNA sequencing. PLoS One 2012, 7(2):e30630. 10.1371/journal.pone.0030630, 3274533, 22347391.
-
(2012)
PLoS One
, vol.7
, Issue.2
, pp. e30630
-
-
Xiong, J.1
Lu, X.2
Zhou, Z.3
Chang, Y.4
Yuan, D.5
Tian, M.6
Wang, L.7
Fu, C.8
Orias, E.9
Miao, W.10
-
26
-
-
65449136284
-
TopHat: discovering splice junctions with RNA-Seq
-
2672628, 19289445
-
Trapnell C, Pachter L, Salzberg SL. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 2009, 25(9):1105-1111. 10.1093/bioinformatics/btp120, 2672628, 19289445.
-
(2009)
Bioinformatics
, vol.25
, Issue.9
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
27
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
3146043, 20436464
-
Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol 2010, 28(5):511-515. 10.1038/nbt.1621, 3146043, 20436464.
-
(2010)
Nat Biotechnol
, vol.28
, Issue.5
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
van Baren, M.J.6
Salzberg, S.L.7
Wold, B.J.8
Pachter, L.9
-
28
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
146917, 9254694
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25(17):3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
29
-
-
0037251964
-
The InterPro Database, 2003 brings increased coverage and new features
-
165493, 12520011
-
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley RR, Courcelle E, Das U, Durbin R, Falquet L, Fleischmann W, Griffiths-Jones S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Lonsdale D, Silventoinen V, Orchard SE, Pagni M, et al. The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 2003, 31(1):315-318. 10.1093/nar/gkg046, 165493, 12520011.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.1
, pp. 315-318
-
-
Mulder, N.J.1
Apweiler, R.2
Attwood, T.K.3
Bairoch, A.4
Barrell, D.5
Bateman, A.6
Binns, D.7
Biswas, M.8
Bradley, P.9
Bork, P.10
Bucher, P.11
Copley, R.R.12
Courcelle, E.13
Das, U.14
Durbin, R.15
Falquet, L.16
Fleischmann, W.17
Griffiths-Jones, S.18
Haft, D.19
Harte, N.20
Hulo, N.21
Kahn, D.22
Kanapin, A.23
Krestyaninova, M.24
Lopez, R.25
Letunic, I.26
Lonsdale, D.27
Silventoinen, V.28
Orchard, S.E.29
Pagni, M.30
more..
-
30
-
-
0034800374
-
InterProScan-an integration platform for the signature-recognition methods in InterPro
-
11590104
-
Zdobnov EM, Apweiler R. InterProScan-an integration platform for the signature-recognition methods in InterPro. Bioinformatics 2001, 17(9):847-848. 10.1093/bioinformatics/17.9.847, 11590104.
-
(2001)
Bioinformatics
, vol.17
, Issue.9
, pp. 847-848
-
-
Zdobnov, E.M.1
Apweiler, R.2
-
31
-
-
0346801873
-
The Gene Ontology (GO) database and informatics resource
-
308770, 14681407
-
Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, Richter J, Rubin GM, Blake JA, Bult C, Dolan M, Drabkin H, Eppig JT, Hill DP, Ni L, Ringwald M, Balakrishnan R, Cherry JM, Christie KR, Costanzo MC, Dwight SS, Engel S, Fisk DG, Hirschman JE, Hong EL, Nash RS, et al. The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res 2004, 32(Database issue):D258-D261. 308770, 14681407.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. D258-D261
-
-
Harris, M.A.1
Clark, J.2
Ireland, A.3
Lomax, J.4
Ashburner, M.5
Foulger, R.6
Eilbeck, K.7
Lewis, S.8
Marshall, B.9
Mungall, C.10
Richter, J.11
Rubin, G.M.12
Blake, J.A.13
Bult, C.14
Dolan, M.15
Drabkin, H.16
Eppig, J.T.17
Hill, D.P.18
Ni, L.19
Ringwald, M.20
Balakrishnan, R.21
Cherry, J.M.22
Christie, K.R.23
Costanzo, M.C.24
Dwight, S.S.25
Engel, S.26
Fisk, D.G.27
Hirschman, J.E.28
Hong, E.L.29
Nash, R.S.30
more..
-
32
-
-
33747846582
-
WEGO: a web tool for plotting GO annotations
-
1538768, 16845012
-
Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R, Bolund L. WEGO: a web tool for plotting GO annotations. Nucleic Acids Res 2006, 34(Web Server issue):W293-W297. 1538768, 16845012.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W293-W297
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
Zhang, Z.6
Wang, J.7
Li, S.8
Li, R.9
Bolund, L.10
-
33
-
-
0037440150
-
IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experiments
-
Romualdi C, Bortoluzzi S, D'Alessi F, Danieli GA. IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experiments. Physiol Genomics 2003, 12(2):159-162.
-
(2003)
Physiol Genomics
, vol.12
, Issue.2
, pp. 159-162
-
-
Romualdi, C.1
Bortoluzzi, S.2
D'Alessi, F.3
Danieli, G.A.4
-
34
-
-
33745614319
-
PseudoPipe: an automated pseudogene identification pipeline
-
16574694
-
Zhang Z, Carriero N, Zheng D, Karro J, Harrison PM, Gerstein M. PseudoPipe: an automated pseudogene identification pipeline. Bioinformatics 2006, 22(12):1437-1439. 10.1093/bioinformatics/btl116, 16574694.
-
(2006)
Bioinformatics
, vol.22
, Issue.12
, pp. 1437-1439
-
-
Zhang, Z.1
Carriero, N.2
Zheng, D.3
Karro, J.4
Harrison, P.M.5
Gerstein, M.6
-
35
-
-
78651323093
-
Rfam: Wikipedia, clans and the "decimal" release
-
3013711, 21062808
-
Gardner PP, Daub J, Tate J, Moore BL, Osuch IH, Griffiths-Jones S, Finn RD, Nawrocki EP, Kolbe DL, Eddy SR, Bateman A. Rfam: Wikipedia, clans and the "decimal" release. Nucleic Acids Res 2011, 39(Database issue):D141-D145. 3013711, 21062808.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D141-D145
-
-
Gardner, P.P.1
Daub, J.2
Tate, J.3
Moore, B.L.4
Osuch, I.H.5
Griffiths-Jones, S.6
Finn, R.D.7
Nawrocki, E.P.8
Kolbe, D.L.9
Eddy, S.R.10
Bateman, A.11
-
36
-
-
84856579279
-
A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni
-
3254664, 22253936
-
Protasio AV, Tsai IJ, Babbage A, Nichol S, Hunt M, Aslett MA, De Silva N, Velarde GS, Anderson TJ, Clark RC, Davidson C, Dillon GP, Holroyd NE, LoVerde PT, Lloyd C, McQuillan J, Oliveira G, Otto TD, Parker-Manuel SJ, Quail MA, Wilson RA, Zerlotini A, Dunne DW, Berriman M. A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni. PLoS Negl Trop Dis 2012, 6(1):e1455. 10.1371/journal.pntd.0001455, 3254664, 22253936.
-
(2012)
PLoS Negl Trop Dis
, vol.6
, Issue.1
, pp. e1455
-
-
Protasio, A.V.1
Tsai, I.J.2
Babbage, A.3
Nichol, S.4
Hunt, M.5
Aslett, M.A.6
De Silva, N.7
Velarde, G.S.8
Anderson, T.J.9
Clark, R.C.10
Davidson, C.11
Dillon, G.P.12
Holroyd, N.E.13
LoVerde, P.T.14
Lloyd, C.15
McQuillan, J.16
Oliveira, G.17
Otto, T.D.18
Parker-Manuel, S.J.19
Quail, M.A.20
Wilson, R.A.21
Zerlotini, A.22
Dunne, D.W.23
Berriman, M.24
more..
-
37
-
-
84895552840
-
Transcriptome profilings of female Schistosoma japonicum reveal significant differential expression of genes after pairing
-
24297695
-
Sun J, Wang SW, Li C, Hu W, Ren YJ, Wang JQ. Transcriptome profilings of female Schistosoma japonicum reveal significant differential expression of genes after pairing. Parasitol Res 2014, 113(3):881-892. 10.1007/s00436-013-3719-2, 24297695.
-
(2014)
Parasitol Res
, vol.113
, Issue.3
, pp. 881-892
-
-
Sun, J.1
Wang, S.W.2
Li, C.3
Hu, W.4
Ren, Y.J.5
Wang, J.Q.6
-
38
-
-
84883487014
-
Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames
-
23970561
-
Magny EG, Pueyo JI, Pearl FM, Cespedes MA, Niven JE, Bishop SA, Couso JP. Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames. Science 2013, 341(6150):1116-1120. 10.1126/science.1238802, 23970561.
-
(2013)
Science
, vol.341
, Issue.6150
, pp. 1116-1120
-
-
Magny, E.G.1
Pueyo, J.I.2
Pearl, F.M.3
Cespedes, M.A.4
Niven, J.E.5
Bishop, S.A.6
Couso, J.P.7
-
39
-
-
13244253776
-
A probabilistic model for the evolution of RNA structure
-
534097, 15507142
-
Holmes I. A probabilistic model for the evolution of RNA structure. BMC Bioinformatics 2004, 5:166. 10.1186/1471-2105-5-166, 534097, 15507142.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 166
-
-
Holmes, I.1
-
40
-
-
33747874580
-
CONTRAfold: RNA secondary structure prediction without physics-based models
-
16873527
-
Do CB, Woods DA, Batzoglou S. CONTRAfold: RNA secondary structure prediction without physics-based models. Bioinformatics 2006, 22(14):e90-e98. 10.1093/bioinformatics/btl246, 16873527.
-
(2006)
Bioinformatics
, vol.22
, Issue.14
, pp. e90-e98
-
-
Do, C.B.1
Woods, D.A.2
Batzoglou, S.3
-
41
-
-
32544452741
-
CMfinder-a covariance model based RNA motif finding algorithm
-
16357030
-
Yao Z, Weinberg Z, Ruzzo WL. CMfinder-a covariance model based RNA motif finding algorithm. Bioinformatics 2006, 22(4):445-452. 10.1093/bioinformatics/btk008, 16357030.
-
(2006)
Bioinformatics
, vol.22
, Issue.4
, pp. 445-452
-
-
Yao, Z.1
Weinberg, Z.2
Ruzzo, W.L.3
-
42
-
-
69249242896
-
Designing secondary structure profiles for fast ncRNA identification
-
Sun Y, Buhler J. Designing secondary structure profiles for fast ncRNA identification. Comput Syst Bioinformatics Conf 2008, 7:145-156.
-
(2008)
Comput Syst Bioinformatics Conf
, vol.7
, pp. 145-156
-
-
Sun, Y.1
Buhler, J.2
-
43
-
-
77955522220
-
Bcheck: a wrapper tool for detecting RNase P RNA genes
-
2996960, 20626900
-
Yusuf D, Marz M, Stadler PF, Hofacker IL. Bcheck: a wrapper tool for detecting RNase P RNA genes. BMC Genomics 2010, 11:432. 10.1186/1471-2164-11-432, 2996960, 20626900.
-
(2010)
BMC Genomics
, vol.11
, pp. 432
-
-
Yusuf, D.1
Marz, M.2
Stadler, P.F.3
Hofacker, I.L.4
|