-
1
-
-
0013394889
-
Mechanisms of alternative pre-messenger RNA splicing
-
Black DL (2003) Mechanisms of alternative pre-messenger RNA splicing. Annu Rev Biochem 72: 291-336.
-
(2003)
Annu Rev Biochem
, vol.72
, pp. 291-336
-
-
Black, D.L.1
-
2
-
-
0032435862
-
Alternative splicing of pre-mRNA: Developmental consequences and mechanisms of regulation
-
Lopez AJ (1998) Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation. Annu Rev Genet 32: 279-305.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 279-305
-
-
Lopez, A.J.1
-
3
-
-
0034256020
-
Alternative pre-mRNA splicing: The logic of combinatorial control
-
Smith CW, Valcarcel J (2000) Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem Sci 25: 381-388.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 381-388
-
-
Smith, C.W.1
Valcarcel, J.2
-
4
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. (2001) Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
-
5
-
-
33748770921
-
Bioinformatics of alternative splicing and its regulation
-
Florea L (2006) Bioinformatics of alternative splicing and its regulation. Brief Bioinform 7: 55-69.
-
(2006)
Brief Bioinform
, vol.7
, pp. 55-69
-
-
Florea, L.1
-
6
-
-
33745394130
-
Alternative splicing and RNA selection pressure - evolutionary consequences for eukaryotic genomes
-
Xing Y, Lee C (2006) Alternative splicing and RNA selection pressure - evolutionary consequences for eukaryotic genomes. Nat Rev Genet 7: 499-509.
-
(2006)
Nat Rev Genet
, vol.7
, pp. 499-509
-
-
Xing, Y.1
Lee, C.2
-
7
-
-
33744809531
-
The types and prevalence of alternative splice forms
-
Zavolan M, van Nimwegen E (2006) The types and prevalence of alternative splice forms. Curr Opin Struct Biol 16: 362-367.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 362-367
-
-
Zavolan, M.1
van Nimwegen, E.2
-
8
-
-
0347623371
-
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
-
Johnson JM, Castle J, Garrett-Engele P, Kan Z, Loerch PM, et al. (2003) Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. Science 302: 2141-2144.
-
(2003)
Science
, vol.302
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.4
Loerch, P.M.5
-
9
-
-
4444346326
-
Estimating rates of alternative splicing in mammals and invertebrates
-
author reply 916-917
-
Kim H, Klein R, Majewski J, Ott J (2004) Estimating rates of alternative splicing in mammals and invertebrates. Nat Genet 36: 915-916; author reply 916-917.
-
(2004)
Nat Genet
, vol.36
, pp. 915-916
-
-
Kim, H.1
Klein, R.2
Majewski, J.3
Ott, J.4
-
10
-
-
0023061372
-
Alternative splicing: A ubiquitous mechanism for the generation of multiple protein isoforms from single genes
-
Breithart RE, Andreadis A, Nadal-Ginard B (1987) Alternative splicing: a ubiquitous mechanism for the generation of multiple protein isoforms from single genes. Annu Rev Biochem 56: 467-495.
-
(1987)
Annu Rev Biochem
, vol.56
, pp. 467-495
-
-
Breithart, R.E.1
Andreadis, A.2
Nadal-Ginard, B.3
-
11
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
The ENCODE Project Consortium
-
The ENCODE Project Consortium (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447: 799-816.
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
-
12
-
-
33846057724
-
NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
-
Pruitt KD, Tatusova T, Maglott DR (2007) NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res 35: D61-D65.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
13
-
-
0034533608
-
An alternative-exon database and its statistical analysis
-
Stamm S, Zhu J, Nakai K, Stoilov P, Stoss O, et al. (2000) An alternative-exon database and its statistical analysis. DNA Cell Biol 19: 739-756.
-
(2000)
DNA Cell Biol
, vol.19
, pp. 739-756
-
-
Stamm, S.1
Zhu, J.2
Nakai, K.3
Stoilov, P.4
Stoss, O.5
-
14
-
-
33644878582
-
ASD: A bioinformatics resource on alternative splicing
-
Stamm S, Riethoven JJ, Le Texier V, Gopalakrishnan C, Kumanduri V, et al. (2006) ASD: a bioinformatics resource on alternative splicing. Nucleic Acids Res 34: D46-D55.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Stamm, S.1
Riethoven, J.J.2
Le Texier, V.3
Gopalakrishnan, C.4
Kumanduri, V.5
-
15
-
-
33645808501
-
AltTrans: Transcript pattern variants annotated for both alternative splicing and alternative polyadenylation
-
Le Texier V, Riethoven JJ, Kumanduri V, Gopalakrishnan C, Lopez F, et al. (2006) AltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation. BMC Bioinformatics 7: 169.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 169
-
-
Le Texier, V.1
Riethoven, J.J.2
Kumanduri, V.3
Gopalakrishnan, C.4
Lopez, F.5
-
16
-
-
33644877169
-
HOLLYWOOD: A comparative relational database of alternative splicing
-
Holste D, Huo G, Tung V, Burge CB (2006) HOLLYWOOD: a comparative relational database of alternative splicing. Nucleic Acids Res 34: D56-D62.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Holste, D.1
Huo, G.2
Tung, V.3
Burge, C.B.4
-
17
-
-
0242594493
-
Database and analyses of known alternatively spliced genes in plants
-
Zhou Y, Zhou C, Ye L, Dong J, Xu H, et al. (2003) Database and analyses of known alternatively spliced genes in plants. Genomics 82: 584-595.
-
(2003)
Genomics
, vol.82
, pp. 584-595
-
-
Zhou, Y.1
Zhou, C.2
Ye, L.3
Dong, J.4
Xu, H.5
-
18
-
-
0002430769
-
SpliceNest: Visualization of gene structure and alternative splicing based on EST clusters
-
Coward E, Haas SA, Vingron M (2002) SpliceNest: visualization of gene structure and alternative splicing based on EST clusters. Trends Genet 18: 53-55.
-
(2002)
Trends Genet
, vol.18
, pp. 53-55
-
-
Coward, E.1
Haas, S.A.2
Vingron, M.3
-
19
-
-
0036081021
-
PALS db: Putative Alternative Splicing database
-
Huang YH, Chen YT, Lai JJ, Yang ST, Yang UC (2002) PALS db: Putative Alternative Splicing database. Nucleic Acids Res 30: 186-190.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 186-190
-
-
Huang, Y.H.1
Chen, Y.T.2
Lai, J.J.3
Yang, S.T.4
Yang, U.C.5
-
20
-
-
0035165586
-
SpliceDB: Database of canonical and non-canonical mammalian splice sites
-
Burset M, Seledtsov IA, Solovyev VV (2001) SpliceDB: database of canonical and non-canonical mammalian splice sites. Nucleic Acids Res 29: 255-259.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 255-259
-
-
Burset, M.1
Seledtsov, I.A.2
Solovyev, V.V.3
-
21
-
-
0035175280
-
AsMamDB: An alternative splice database of mammals
-
Ji H, Zhou Q, Wen F, Xia H, Lu X, et al. (2001) AsMamDB: an alternative splice database of mammals. Nucleic Acids Res 29: 260-263.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 260-263
-
-
Ji, H.1
Zhou, Q.2
Wen, F.3
Xia, H.4
Lu, X.5
-
22
-
-
0035393343
-
Genome-wide detection of alternative splicing in expressed sequences of human genes
-
Modrek B, Resch A, Grasso C, Lee C (2001) Genome-wide detection of alternative splicing in expressed sequences of human genes. Nucleic Acids Res 29: 2850-2859.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 2850-2859
-
-
Modrek, B.1
Resch, A.2
Grasso, C.3
Lee, C.4
-
23
-
-
0038513944
-
ProSplicer: A database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data
-
Huang HD, Horng JT, Lee CC, Liu BJ (2003) ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data. Genome Biol 4: R29.
-
(2003)
Genome Biol
, vol.4
-
-
Huang, H.D.1
Horng, J.T.2
Lee, C.C.3
Liu, B.J.4
-
24
-
-
34547869583
-
EuSplice: A unified resource for the analysis of splice signals and alternative splicing in eukaryotic genes
-
Bhasi A, Pandey RV, Utharasamy SP, Senapathy P (2007) EuSplice: a unified resource for the analysis of splice signals and alternative splicing in eukaryotic genes. Bioinformatics 23: 1815-1823.
-
(2007)
Bioinformatics
, vol.23
, pp. 1815-1823
-
-
Bhasi, A.1
Pandey, R.V.2
Utharasamy, S.P.3
Senapathy, P.4
-
25
-
-
33846036722
-
The ASAP II database: Analysis and comparative genomics of alternative splicing in 15 animal species
-
Kim N, Alekseyenko AV, Roy M, Lee C (2007) The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species. Nucleic Acids Res 35: D93-D98.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Kim, N.1
Alekseyenko, A.V.2
Roy, M.3
Lee, C.4
-
26
-
-
33645521073
-
Evolution of exon-intron structure and alternative splicing in fruit flies and malarial mosquito genomes
-
Malko DB, Makeev VJ, Mironov AA, Gelfand MS (2006) Evolution of exon-intron structure and alternative splicing in fruit flies and malarial mosquito genomes. Genome Res 16: 505-509.
-
(2006)
Genome Res
, vol.16
, pp. 505-509
-
-
Malko, D.B.1
Makeev, V.J.2
Mironov, A.A.3
Gelfand, M.S.4
-
27
-
-
33646548246
-
-
Collins L, Penny D (2006) Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Investigating the intron recognition mechanism in eukaryotes. Mol Biol Evol 23: 901-910.
-
Collins L, Penny D (2006) Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Investigating the intron recognition mechanism in eukaryotes. Mol Biol Evol 23: 901-910.
-
-
-
-
28
-
-
28044455878
-
The architecture of pre-mRNAs affects mechanisms of splice-site pairing
-
Fox-Walsh KL, Dou Y, Lam BJ, Hung SP, Baldi PF, et al. (2005) The architecture of pre-mRNAs affects mechanisms of splice-site pairing. Proc Natl Acad Sci U S A 102: 16176-16181.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 16176-16181
-
-
Fox-Walsh, K.L.1
Dou, Y.2
Lam, B.J.3
Hung, S.P.4
Baldi, P.F.5
-
29
-
-
28844443988
-
Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes
-
Nagasaki H, Arita M, Nishizawa T, Suwa M, Gotoh O (2005) Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes. Gene 364: 53-62.
-
(2005)
Gene
, vol.364
, pp. 53-62
-
-
Nagasaki, H.1
Arita, M.2
Nishizawa, T.3
Suwa, M.4
Gotoh, O.5
-
30
-
-
33746855164
-
Defective splicing, disease and therapy: Searching for master checkpoints in exon definition
-
Buratti E, Baralle M, Baralle FE (2006) Defective splicing, disease and therapy: searching for master checkpoints in exon definition. Nucleic Acids Res 34: 3494-3510.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3494-3510
-
-
Buratti, E.1
Baralle, M.2
Baralle, F.E.3
-
31
-
-
4644334742
-
Multiple links between transcription and splicing
-
Kornblihtt AR, de la Mata M, Fededa JP, Munoz MJ, Nogues G (2004) Multiple links between transcription and splicing. RNA 10: 1489-1498.
-
(2004)
RNA
, vol.10
, pp. 1489-1498
-
-
Kornblihtt, A.R.1
de la Mata, M.2
Fededa, J.P.3
Munoz, M.J.4
Nogues, G.5
-
32
-
-
33748351186
-
Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells
-
Listerman I, Sapra AK, Neugebauer KM (2006) Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells. Nat Struct Mol Biol 13: 815-822.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 815-822
-
-
Listerman, I.1
Sapra, A.K.2
Neugebauer, K.M.3
-
34
-
-
25444516195
-
Gene finding in the chicken genome
-
Eyras E, Reymond A, Castelo R, Bye JM, Camara F, et al. (2005) Gene finding in the chicken genome. BMC Bioinformatics 6: 131.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 131
-
-
Eyras, E.1
Reymond, A.2
Castelo, R.3
Bye, J.M.4
Camara, F.5
-
35
-
-
0013159620
-
Splicing graphs and EST assembly problem
-
Heber S, Alekseyev M, Sze SH, Tang H, Pevzner PA (2002) Splicing graphs and EST assembly problem. Bioinformatics 18: S181-S188.
-
(2002)
Bioinformatics
, vol.18
-
-
Heber, S.1
Alekseyev, M.2
Sze, S.H.3
Tang, H.4
Pevzner, P.A.5
-
36
-
-
0348129525
-
trome, trEST and trGEN: Databases of predicted protein sequences
-
Sperisen P, Iseli C, Pagni M, Stevenson BJ, Bucher P, et al. (2004) trome, trEST and trGEN: databases of predicted protein sequences. Nucleic Acids Res 32: D509-D511.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Sperisen, P.1
Iseli, C.2
Pagni, M.3
Stevenson, B.J.4
Bucher, P.5
-
37
-
-
2442694425
-
Transcriptome and genome conservation of alternative splicing events in humans and mice
-
Sugnet CW, Kent WJ, Ares M Jr, Haussler D (2004) Transcriptome and genome conservation of alternative splicing events in humans and mice. Pac Symp Biocomput. pp 66-77.
-
(2004)
Pac Symp Biocomput
, pp. 66-77
-
-
Sugnet, C.W.1
Kent, W.J.2
Ares Jr, M.3
Haussler, D.4
-
39
-
-
4444270781
-
Genome wide identification and classification of alternative splicing based on EST data
-
Gupta S, Zink D, Korn B, Vingron M, Haas SA (2004) Genome wide identification and classification of alternative splicing based on EST data. Bioinformatics 20: 2579-2585.
-
(2004)
Bioinformatics
, vol.20
, pp. 2579-2585
-
-
Gupta, S.1
Zink, D.2
Korn, B.3
Vingron, M.4
Haas, S.A.5
-
40
-
-
17844407888
-
ECgene: Genome-based EST clustering and gene modeling for alternative splicing
-
Kim N, Shin S, Lee S (2005) ECgene: genome-based EST clustering and gene modeling for alternative splicing. Genome Res 15: 566-576.
-
(2005)
Genome Res
, vol.15
, pp. 566-576
-
-
Kim, N.1
Shin, S.2
Lee, S.3
-
41
-
-
13244292333
-
DEDB: A database of Drosophila melanogaster exons in splicing graph form
-
Lee BT, Tan TW, Ranganathan S (2004) DEDB: a database of Drosophila melanogaster exons in splicing graph form. BMC Bioinformatics 5: 189.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 189
-
-
Lee, B.T.1
Tan, T.W.2
Ranganathan, S.3
-
42
-
-
34547599504
-
ASTALAVISTA: Dynamic and flexible analysis of alternative splicing events in custom gene datasets
-
Foissac S, Sammeth M (2007) ASTALAVISTA: dynamic and flexible analysis of alternative splicing events in custom gene datasets. Nucleic Acids Res 35: W297-W299.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Foissac, S.1
Sammeth, M.2
-
43
-
-
0037370461
-
Evolution of alternative splicing: Deletions, insertions and origin of functional parts of proteins from intron sequences
-
Kondrashov FA, Koonin EV (2003) Evolution of alternative splicing: deletions, insertions and origin of functional parts of proteins from intron sequences. Trends Genet 19: 115-119.
-
(2003)
Trends Genet
, vol.19
, pp. 115-119
-
-
Kondrashov, F.A.1
Koonin, E.V.2
-
44
-
-
33645769791
-
Large-scale trends in the evolution of gene structures within 11 animal genomes
-
doi:10.1371/journal.pcbi.0020015
-
Yandell M, Mungall CJ, Smith C, Prochnik S, Kaminker J, et al. (2006) Large-scale trends in the evolution of gene structures within 11 animal genomes. PLoS Comput Biol 2: e15. doi:10.1371/journal.pcbi.0020015.
-
(2006)
PLoS Comput Biol
, vol.2
-
-
Yandell, M.1
Mungall, C.J.2
Smith, C.3
Prochnik, S.4
Kaminker, J.5
-
45
-
-
33745622860
-
Genomic localization of RNA binding proteins reveals links between pre-mRNA processing and transcription
-
Swinburne IA, Meyer CA, Liu XS, Silver PA, Brodsky AS (2006) Genomic localization of RNA binding proteins reveals links between pre-mRNA processing and transcription. Genome Res 16: 912-921.
-
(2006)
Genome Res
, vol.16
, pp. 912-921
-
-
Swinburne, I.A.1
Meyer, C.A.2
Liu, X.S.3
Silver, P.A.4
Brodsky, A.S.5
-
46
-
-
38549164691
-
GenBank
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL (2008) GenBank. Nucleic Acids Res 36: D25-D30.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
48
-
-
33846039019
-
-
Hubbard TJ, Aken BL, Beal K, Ballester B, Caccamo M, et al. (2007) Ensembl 2007. Nucleic Acids Res 35: D610-D617.
-
(2007)
Ensembl 2007. Nucleic Acids Res
, vol.35
-
-
Hubbard, T.J.1
Aken, B.L.2
Beal, K.3
Ballester, B.4
Caccamo, M.5
-
49
-
-
33748645500
-
GENCODE: Producing a reference annotation for ENCODE
-
Harrow J, Denoeud F, et al. (2006) GENCODE: Producing a reference annotation for ENCODE. Genome Biol 7: S4.1-S4.9.
-
(2006)
Genome Biol
, vol.7
-
-
Harrow, J.1
Denoeud, F.2
-
50
-
-
31544461505
-
Alternative splicing regulation at tandem 3′ splice sites
-
Akerman M, Mandel-Gutfreund Y (2006) Alternative splicing regulation at tandem 3′ splice sites. Nucleic Acids Res 34: 23-31.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 23-31
-
-
Akerman, M.1
Mandel-Gutfreund, Y.2
-
51
-
-
33646491292
-
A simple physical model predicts small exon length variations
-
doi:10.1371/journal.pgen.0020045
-
Chern TM, van Nimwegen E, Kai C, Kawai J, Carninci P, et al. (2006) A simple physical model predicts small exon length variations. PLoS Genet 2: e45. doi:10.1371/journal.pgen.0020045.
-
(2006)
PLoS Genet
, vol.2
-
-
Chern, T.M.1
van Nimwegen, E.2
Kai, C.3
Kawai, J.4
Carninci, P.5
-
52
-
-
9644278038
-
Widespread occurrence of alternative splicing at NAGNAG acceptors contributes to proteome plasticity
-
Hiller M, Huse K, Szafranski K, Jahn N, Hampe J, et al. (2004) Widespread occurrence of alternative splicing at NAGNAG acceptors contributes to proteome plasticity. Nat Genet 36: 1255-1257.
-
(2004)
Nat Genet
, vol.36
, pp. 1255-1257
-
-
Hiller, M.1
Huse, K.2
Szafranski, K.3
Jahn, N.4
Hampe, J.5
-
53
-
-
0023954075
-
Possible evolution of splice-junction signals in eukaryotic genes from stop codons
-
Senapathy P (1988) Possible evolution of splice-junction signals in eukaryotic genes from stop codons. Proc Natl Acad Sci U S A 85: 1129-1133.
-
(1988)
Proc Natl Acad Sci U S A
, vol.85
, pp. 1129-1133
-
-
Senapathy, P.1
-
55
-
-
33846681383
-
Different levels of alternative splicing among eukaryotes
-
Kim E, Magen A, Ast G (2007) Different levels of alternative splicing among eukaryotes. Nucleic Acids Res 35: 125-131.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 125-131
-
-
Kim, E.1
Magen, A.2
Ast, G.3
-
56
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
-
57
-
-
34250330777
-
What is a gene, post-ENCODE? History and updated definition
-
Gerstein MB, Bruce C, Rozowsky JS, Zheng D, Du J, et al. (2007) What is a gene, post-ENCODE? History and updated definition. Genome Res 17: 669-681.
-
(2007)
Genome Res
, vol.17
, pp. 669-681
-
-
Gerstein, M.B.1
Bruce, C.2
Rozowsky, J.S.3
Zheng, D.4
Du, J.5
-
58
-
-
33745314092
-
Genetics: What is a gene?
-
Pearson H (2006) Genetics: what is a gene? Nature 441: 398-401.
-
(2006)
Nature
, vol.441
, pp. 398-401
-
-
Pearson, H.1
-
59
-
-
30044431810
-
Transcription-mediated gene fusion in the human genome
-
Akiva P, Toporik A, Edelheit S, Peretz Y, Diber A, et al. (2006) Transcription-mediated gene fusion in the human genome. Genome Res 16: 30-36.
-
(2006)
Genome Res
, vol.16
, pp. 30-36
-
-
Akiva, P.1
Toporik, A.2
Edelheit, S.3
Peretz, Y.4
Diber, A.5
-
60
-
-
30044445670
-
Tandem chimerism as a means to increase protein complexity in the human genome
-
Parra G, Reymond A, Dabbouseh N, Dermitzakis ET, Castelo R, et al. (2006) Tandem chimerism as a means to increase protein complexity in the human genome. Genome Res 16: 37-44.
-
(2006)
Genome Res
, vol.16
, pp. 37-44
-
-
Parra, G.1
Reymond, A.2
Dabbouseh, N.3
Dermitzakis, E.T.4
Castelo, R.5
-
61
-
-
34250369629
-
Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions
-
Denoeud F, Kapranov P, Ucla C, Frankish A, Castelo R, et al. (2006) Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions. Genome Res 17: 746-759.
-
(2006)
Genome Res
, vol.17
, pp. 746-759
-
-
Denoeud, F.1
Kapranov, P.2
Ucla, C.3
Frankish, A.4
Castelo, R.5
-
62
-
-
33748550313
-
Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs
-
Takeda J, Suzuki Y, Nakao M, Barrero RA, Koyanagi KO, et al. (2006) Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs. Nucleic Acids Res 34: 3917-3928.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3917-3928
-
-
Takeda, J.1
Suzuki, Y.2
Nakao, M.3
Barrero, R.A.4
Koyanagi, K.O.5
-
63
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447: 799-816.
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
-
64
-
-
0028088187
-
FlyBase - the Drosophila database
-
The FlyBase Consortium
-
The FlyBase Consortium (1994) FlyBase - the Drosophila database. Nucleic Acids Res 22: 3456-3458.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3456-3458
-
-
-
65
-
-
0035165576
-
WormBase: Network access to the genome and biology of Caenorhabditis elegans
-
Stein L, Sternberg P, Durbin R, Thierry-Mieg J, Spieth J (2001) WormBase: network access to the genome and biology of Caenorhabditis elegans. Nucleic Acids Res 29: 82-86.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 82-86
-
-
Stein, L.1
Sternberg, P.2
Durbin, R.3
Thierry-Mieg, J.4
Spieth, J.5
-
67
-
-
0036846746
-
The origin and evolution of model organisms
-
Hedges SB (2002) The origin and evolution of model organisms. Nat Rev Genet 3: 838-849.
-
(2002)
Nat Rev Genet
, vol.3
, pp. 838-849
-
-
Hedges, S.B.1
|