Bacteriocin production and gene sequencing analysis from vaginal Lactobacillus strains

Archives of Microbiology

Volumn 196, Issue 9, 2014, Pages 645-653

  Stoyancheva, Galina ^a   Marzotto, Marta ^b   Dellaglio, Franco ^b   Torriani, Sandra ^b  

^a INSTITUTE OF MICROBIOLOGY   (Bulgaria)

^b UNIVERSITY OF VERONA   (Italy)

Author keywords

Bacteriocin genes; Gassericin; Human microbiota; Lactobacillus crispatus; Lactobacillus gasseri

Indexed keywords

ACIDOCIN LF 221A; BACTERIOCIN; DNA 16S; GASSERICIN A; GASSERICIN T; PROBIOTIC AGENT; UNCLASSIFIED DRUG;

ANTIMICROBIAL ACTIVITY; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATION; CANDIDA PARAPSILOSIS; DNA ISOLATION; DNA SEQUENCE; ENTEROCOCCUS FAECALIS; ESCHERICHIA COLI; FEMALE; GROWTH INHIBITION; HUMAN; IMMUNODIFFUSION; KLEBSIELLA; KLEBSIELLA OZAENAE; KLEBSIELLA PNEUMONIAE; LACTOBACILLUS; LACTOBACILLUS ACIDOPHILUS; LACTOBACILLUS CASEI; LACTOBACILLUS CRISPATUS; LACTOBACILLUS CURVATUS; LACTOBACILLUS DELBRUECKII; LACTOBACILLUS HELVETICUS; LACTOBACILLUS PLANTARUM; LACTOBACILLUS SAKEI; LACTOCOCCUS LACTIS; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; STAPHYLOCOCCUS AUREUS; VAGINA FLORA;

CANDIDA PARAPSILOSIS; ESCHERICHIA COLI; KLEBSIELLA; LACTOBACILLUS; LACTOBACILLUS CRISPATUS; LACTOBACILLUS GASSERI; STAPHYLOCOCCUS AUREUS;

ANTI-INFECTIVE AGENTS; BACTERIA; BACTERIOCINS; CANDIDA; FEMALE; HUMANS; LACTOBACILLUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; VAGINA;

EID: 84906335596     PISSN: 03028933     EISSN: 1432072X     Source Type: Journal    
DOI: 10.1007/s00203-014-1003-1     Document Type: Article

References (50)

1. Al Kassaa I, Hamze M, Hober D, Chihib N, Drider D (2014) Identification of vaginal lactobacilli with potential probiotic properties isolated from women in North Lebanon. Microb Ecol. doi:10.1007/s00248-014-0384-7
2. Andreu A (2004) Lactobacillus as a probiotic for preventing urogenital infections. Rev Med Microbiol 15:1-6
3. Atassi F, Brassart D, Grob P, Graf F, Servin AL (2006) Vaginal Lactobacillus isolates inhibit uropathogenic Escherichia coli. FEMS Microbiol Lett 257:132-138. doi:10.1111/j.1574-6968.2006.00163.x
4. Ayeni F, Adeniyi B, Ogunbanwo S, Tabasco R, Paarup T, Peláez C, Requena T (2009) Inhibition of uropathogens by lactic acid bacteria isolated from dairy foods and cow's intestine in western Nigeria. Arch Microbiol 191:639-648. doi:10.1007/s00203-009-0492-9
5. Berger B, Pridmore R, Barretto C, Delmas-Julien F, Schreiber K, Arigoni F, Brussow H (2007) Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics. J Bacteriol 189:1311-1321. doi:10.1128/JB.01393-06 (Pubitemid 46239752)
6. Boris S, Barbés C (2000) Role played by lactobacilli in controlling the population of vaginal pathogens. Microbes Infect 2:543-546. doi:10.1016/S1286-4579(00)00313-0 (Pubitemid 30387208)
7. Bull M, Plummer S, Marchesi J, Mahenthiralingam E (2013) The life history of Lactobacillus acidophilus as a probiotic: a tale of revisionary taxonomy, misidentification and commercial success. FEMS Microbiol Lett 349:77-87. doi:10.1111/1574-6968.12293
8. Chapman C, Gibson G, Todd S, Rowland I (2013) Comparative in vitro inhibition of urinary tract pathogens by single-and multi-strain probiotics. Eur J Nutr 52:1669-1677. doi:10.1007/s00394-013-0501-2
9. Chen Y, Wang Y, Chow Y, Yanagida F, Liao C, Chiu C (2014) Purification and characterization of plantaricin Y, a novel bacteriocin produced by Lactobacillus plantarum 510. Arch Microbiol 196:193-199. doi:10.1007/s00203-014- 0958-2
10. Collado M, Hernandez M, Sanz Y (2005) Production of bacteriocin-like inhibitory compounds by human feacal Bifidobacterium strains. J Food Protect 5:900-1111
11. Corsetti A, Settanni L, Van Sinderen D (2004) Characterization of bacteriocin-like inhibitory substances (BLIS) from sourdough lactic acid bacteria and evaluation of their in vitro and in situ activity. J Appl Microbiol 96:521-534. doi:10.1111/j.1365-2672.2004.02171.x (Pubitemid 38297074)
12. Cotter P, Hill C, Ross R (2005) Bacteriocins: developing innate immunity for food. Nat Rev Microbiol 3:777-788. doi:10.1038/nrmicro1273 (Pubitemid 41518738)
13. Cox M, Cookson W, Moffatt M (2013) Sequencing the human microbiome in health and disease. Hum Mol Genet 22:R88-R94. doi:10.1093/hmg/ddt398
14. De Gregorio P, Tomás M, Santos V, Nader-Macías M (2012) Beneficial lactobacilli: effects on the vaginal tract in a murine experimental model. Antonie van Leeuwenhoek J Microbiol 102:569-580. doi:10.1007/s10482-012- 9752-9
15. Drider D, Fimland G, Héchard Y, McMullen L, Prévost H (2006) The continuing story of class IIa bacteriocins. Microbiol Mol Biol Rev 70:564-582. doi:10.1128/MMBR.00016-05 (Pubitemid 43895038)
16. Eden P, Schmidt T, Blakemore R, Pace N (1991) Phylogenetic analysis of Aquaspirillum magnetotacticum using polymerase chain reaction-amplified 16S rRNA-specific DNA. Int J Syst Bacteriol 41:324-325. doi:10.1099/00207713-41-2- 324
17. El Aila N, Tency I, Claeys G et al (2009) Identification and genotyping of bacteria from paired vaginal and rectal samples from pregnant women indicates similarity between vaginal and rectal microflora. BMC Infect Dis 9:167. doi:10.1186/1471-2334-9-167
18. Fredricks D, Fiedler T, Marrazzo J (2005) Molecular identification of bacteria associated with bacterial vaginosis. N Engl J Med 353:1899-1911. doi:10.1056/NEJMoa043802 (Pubitemid 41565955)
19. Fujinaka H, Takeshita T, Sato H, Yamamoto T, Nakamura J, Hase T, Yamashita Y (2013) Relationship of periodontal clinical parameters with bacterial composition in human dental plaque. Arch Microbiol 195:371-383. doi:10.1007/s00203-013-0883-9
20. Gerbaldo GA, Barberis C, Pascual L, Dalcero A, Barberis L (2012) Antifungal activity of two Lactobacillus strains with potential probiotic properties. FEMS Microbiol Lett 332:27-33. doi:10.1111/j.1574-6968.2012.02570.x
21. Hernández D, Cardell E, Zárate V (2005) Antimicrobial activity of lactic acid bacteria isolated from Tenerife cheese: initial characterization of plantaricin TF711, a bacteriocin-like substance produced by Lactobacillus plantarum TF711. J Appl Microbiol 99:77-84. doi:10.1111/j.1365- 2672.2005.02576.x
22. Kawai Y, Saito T, Suzuki M, Itoh T (1998) Sequence analysis by cloning of the structural gene of gassericin A, a hydrophobic bacteriocin produced by Lactobacillus gasseri LA39. Biosci Biotechnol Biochem 62:887-892. doi:10.1271/bbb.62.887 (Pubitemid 128473710)
23. Kawai Y, Saitoh B, Takahashi O, Kitazawa H, Saito T, Nakajima H, Itoh T (2000) Primary amino acid and DNA sequences of gassericin T, a lactacin F-family bacteriocin produced by Lactobacillus gasseri SBT2055. Biosci Biotechnol Biochem 64:2201-2208. doi:10.1271/bbb.64.2201
24. Kawai Y, Ishii Y, Arakawa K et al (2004) Structural and functional differences in two cyclic bacteriocins with the same sequences produced by lactobacilli. Appl Environ Microbiol 70:2906-2911. doi:10.1128/AEM.70.5.2906- 2911.2004 (Pubitemid 38657808)
25. Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120. doi:10.1007/BF01731581
26. Klaenhammer T, Kleerebezem M, Kopp M, Rescigno M (2012) The impact of probiotics and prebiotics on the immune system. Nat Rev Immunol 12:728-734. doi:10.1038/nri3312
27. Lane D (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Wiley and Sons, New York, pp 115-175
28. MacPhee R, Miller W, Gloor G, McCormick J, Hammond J, Burton J, Reid G (2013) Influence of the vaginal microbiota on toxic shock syndrome Toxin 1 production by Staphylococcus aureus. Appl Environ Microbiol 79:1835-1842. doi:10.1128/AEM.02908-12
29. Majhenic A, Matijasic B, Rogelj I (2003) Chromosomal location of the genetic determinants for bacteriocins produced by Lactobacillus gasseri K7. J Dairy Res 70:199-203. doi:10.1017/S0022029903006162 (Pubitemid 36599408)
30. Majhenic A, Venema K, Allison G, Matijasić B, Rogelj I, Klaenhammer T (2004) DNA analysis of the genes encoding acidocin LF221 A and acidocin LF221 B, two bacteriocins produced by Lactobacillus gasseri LF221. Appl Microbiol Biotechnol 63:705-714. doi:10.1007/s00253-003-1424-2 (Pubitemid 38316699)
31. Maldonado A, Ruiz-Barba J, Jiménez-Díaz R (2004) Production of plantaricin NC8 by Lactobacillus plantarum NC8 is induced in the presence of different types of gram-positive bacteria. Arch Microbiol 181:8-16. doi:10.1007/s00203-003-0606-8 (Pubitemid 38161231)
32. Martín R, Miquel S, Ulmer J, Kechaou N, Langella P, Bermúdez-Humarán L (2013) Role of commensal and probiotic bacteria in human health: a focus on inflammatory bowel disease. Microb Cell Fact 12:71. doi:10.1186/1475-2859-12-71
33. Messaoudi S, Kergourlay G, Rossero A, Ferchichi M, Prévost H, Drider D, Manai M, Dousset X (2011) Identification of lactobacilli residing in chicken ceca with antagonism against Campylobacter. Int Microbiol 14:103-110. doi:10.2436/20.1501.01.140
34. Miteva V, Ivanova I, Budakov I, Pantev A, Stefanova T, Danova S, Moncheva P, Mitev V, Dousset X, Boyaval P (1998) Detection and characterization of a novel antibacterial substance produced by a Lactobacillus delbrueckii strain 1043. J Appl Microbiol 85:603-614. doi:10.1046/j.1365-2672.1998.853568.x (Pubitemid 28419366)
35. Navarro L, Zarazaga M, Sáenz J, Ruiz-Larrea F, Torres C (2000) Bacteriocin production by lactic acid bacteria isolated from Rioja red wines. J Appl Microbiol 88:44-51. doi:10.1046/j.1365-2672.2000.00865.x (Pubitemid 30140181)
36. Nissen-Meyer J, Rogne P, Oppegard C, Haugen H, Kristiansen P (2009) Structure-function relationships of the non-lanthionine-containing peptide (class II) bacteriocins produced by gram-positive bacteria. Curr Pharm Biotechnol 10:19-37. doi:10.2174/138920109787048661
37. Pavlova S, Kilic A, Kilic S, So J, Nader-Macias M, Simoes J, Tao L (2002) Genetic diversity of vaginal lactobacilli from women in different countries based on 16S rRNA gene sequences. J Appl Microbiol 92:451-459. doi:10.1046/j.1365-2672.2002.01547.x (Pubitemid 34227136)
38. Piard J, Desmazeaud M (1992) Inhibiting factors produced by lactic acid bacteria. 2. Bacteriocins and other antimicrobial substances. Lait 72:13-142. doi:10.1051/lait:199229
39. Ravel J, Gajer P, Abdo Z et al (2011) Vaginal microbiome of reproductive-age women. Proc Natl Acad Sci USA 108:4680-4687
40. Riley M, Wertz J (2002) Bacteriocin diversity: ecological and evolutionary perspectives. Biochimie 84:357-364. doi:10.1016/S0300-9084(02) 01421-9 (Pubitemid 35350866)
41. Sabia C, Anacarso I, Bergonzini A, Gargiulo R, Sarti M, Condò C, Messi P, De Niederhausern S, Iseppi R, Bondi M (2014) Detection and partial characterization of a bacteriocin-like substance produced by Lactobacillus fermentum CS57 isolated from human vaginal secretions. Anaerobe 26:41-45. doi:10.1016/j.anaerobe.2014.01.004
42. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
43. Selle K, Klaenhammer T (2013) Genomic and phenotypic evidence for probiotic influences of Lactobacillus gasseri on human health. FEMS Microbiol Rev 37:915-935. doi:10.1111/1574-6976.12021
44. Simova E, Beshkova D, Dimitrov Zh (2009) Characterization and antimicrobial spectrum of bacteriocins produced by lactic acid bacteria isolated from traditional Bulgarian dairy products. J Appl Microbiol 106:692-701. doi:10.1111/j.1365-2672.2008.04052.x
45. Stoyancheva G, Danova S, Boudakov I (2006) Molecular identification of vaginal lactobacilli isolated from Bulgarian women. Antonie van Leeuwenhoek J Microbiol 90:201-210. doi:10.1007/s10482-006-9072-z (Pubitemid 44314598)
46. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596-1599. doi:10.1093/molbev/msm092 (Pubitemid 47236692)
47. Thompson J, Higgins D, Gibson T (1994) Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680 (Pubitemid 24354800)
48. Verhelst R, Verstraelen H, Claeys G, Verschraegen G, Delanghe J, Van Simaey L, De Ganck C, Temmerman M, Vaneechoutte M (2004) Cloning of 16S rRNA genes amplified from normal and disturbed vaginal microflora suggests a strong association between Atopobium vaginae, Gardnerella vaginalis and bacterial vaginosis. BMC Microbiol 4:16-26. doi:10.1186/1471-2180-4-16
49. Witkin S (2007) Bacterial flora of the female genital tract: function and immune regulation. Best Pract Res Clin Obstet Gynaecol 21:347-354. doi:10.1016/j.bpobgyn.2006.12.004
50. Zhou X, Bent S, Schneider M, Davis C, Islam M, Forney L (2004) Characterization of vaginal microbial communities in adult healthy women using cultivation independent methods. Microbiology 150:2565-2573. doi:10.1099/mic.0.26905-0 (Pubitemid 39173262)