Genomic profiling of collaborative cross founder mice infected with respiratory viruses reveals novel transcripts and infection-related strain-specific gene and isoform expression

G3: Genes, Genomes, Genetics

Volumn 4, Issue 8, 2014, Pages 1429-1444

  Xiong, Hao ^a,b   Morrison, Juliet ^a,b   Ferris, Martin T ^b,c   Gralinski, Lisa E ^b,d   Whitmore, Alan C ^b,c   Green, Richard ^a,b   Thomas, Matthew J ^a,b   Tisoncik Go, Jennifer ^a,b   Schroth, Gary P ^e   de Villena, Fernando Pardo Manuel ^c   Baric, Ralph S ^b,d   Heise, Mark T ^b,c   Peng, Xinxia ^a,b   Katze, Michael G ^a,b  

^a UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

^b Pacific Northwest Regional Cntr of Excellence for Biodefense and Emerging Infectious Diseases Res   (United States)

^c IL   (United States)

^d UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^e ILLUMINA INC   (United States)

Author keywords

Collaborative cross; Isoform differential expression; Mouse transcriptome annotation; RNA seq; Viral infection

Indexed keywords

RNA;

ALTERNATIVE RNA SPLICING; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; EXON; FEMALE; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE FUNCTION; GENE MUTATION; GENETIC VARIABILITY; GENOME; HUMAN; IMMUNE RESPONSE; INFLUENZA A; INFLUENZA VIRUS A; INTRON; LUNG; MOUSE; MOUSE STRAIN; NONHUMAN; NUCLEOTIDE SEQUENCE; RESPIRATORY VIRUS; RNA SEQUENCE; SARS CORONAVIRUS; SEVERE ACUTE RESPIRATORY SYNDROME; VIRAL RESPIRATORY TRACT INFECTION; VIRUS CELL INTERACTION; VIRUS STRAIN;

EID: 84906249367     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.114.011759     Document Type: Article

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