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Volumn 409, Issue , 2014, Pages 117-130

Development of a contemporary globally diverse HIV viral panel by the EQAPOL program

Author keywords

EQAPOL; HIV; Recombinant; Subtype panel

Indexed keywords

ANTIGEN P24; HUMAN IMMUNODEFICIENCY VIRUS VACCINE; REAGENT;

EID: 84906095368     PISSN: 00221759     EISSN: 18727905     Source Type: Journal    
DOI: 10.1016/j.jim.2014.01.004     Document Type: Review
Times cited : (38)

References (63)
  • 4
    • 80051728335 scopus 로고    scopus 로고
    • Improving clinical laboratory efficiency: a time-motion evaluation of the Abbott m2000 RealTime and Roche COBAS AmpliPrep/COBAS TaqMan PCR systems for the simultaneous quantitation of HIV-1 RNA and HCV RNA
    • Amendola A., Coen S., Belladonna S., Pulvirenti F.R., Clemens J.M., Capobianchi M.R. Improving clinical laboratory efficiency: a time-motion evaluation of the Abbott m2000 RealTime and Roche COBAS AmpliPrep/COBAS TaqMan PCR systems for the simultaneous quantitation of HIV-1 RNA and HCV RNA. Clin. Chem. Lab. Med. 2011, 49:1283.
    • (2011) Clin. Chem. Lab. Med. , vol.49 , pp. 1283
    • Amendola, A.1    Coen, S.2    Belladonna, S.3    Pulvirenti, F.R.4    Clemens, J.M.5    Capobianchi, M.R.6
  • 5
    • 0037829662 scopus 로고    scopus 로고
    • Evaluation of the clinical sensitivities of three viral load assays with plasma samples from a pediatric population predominantly infected with human immunodeficiency virus type 1 subtype G and BG recombinant forms
    • Antunes R., Figueiredo S., Bartolo I., Pinheiro M., Rosado L., Soares I., Lourenco H., Taveira N. Evaluation of the clinical sensitivities of three viral load assays with plasma samples from a pediatric population predominantly infected with human immunodeficiency virus type 1 subtype G and BG recombinant forms. J. Clin. Microbiol. 2003, 41:3361.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 3361
    • Antunes, R.1    Figueiredo, S.2    Bartolo, I.3    Pinheiro, M.4    Rosado, L.5    Soares, I.6    Lourenco, H.7    Taveira, N.8
  • 7
    • 20944444788 scopus 로고    scopus 로고
    • Biologic and genetic characterization of a panel of 60 human immunodeficiency virus type 1 isolates, representing clades A, B, C, D, CRF01_AE, and CRF02_AG, for the development and assessment of candidate vaccines
    • Brown B.K., Darden J.M., Tovanabutra S., Oblander T., Frost J., Sanders-Buell E., de Souza M.S., Birx D.L., McCutchan F.E., Polonis V.R. Biologic and genetic characterization of a panel of 60 human immunodeficiency virus type 1 isolates, representing clades A, B, C, D, CRF01_AE, and CRF02_AG, for the development and assessment of candidate vaccines. J. Virol. 2005, 79:6089.
    • (2005) J. Virol. , vol.79 , pp. 6089
    • Brown, B.K.1    Darden, J.M.2    Tovanabutra, S.3    Oblander, T.4    Frost, J.5    Sanders-Buell, E.6    de Souza, M.S.7    Birx, D.L.8    McCutchan, F.E.9    Polonis, V.R.10
  • 10
    • 84855821986 scopus 로고    scopus 로고
    • Blood screening nucleic acid amplification tests for human immunodeficiency virus Type 1 may require two different amplification targets
    • Chudy M., Weber-Schehl M., Pichl L., Jork C., Kress J., Heiden M., Funk M.B., Nubling C.M. Blood screening nucleic acid amplification tests for human immunodeficiency virus Type 1 may require two different amplification targets. Transfusion 2012, 52:431.
    • (2012) Transfusion , vol.52 , pp. 431
    • Chudy, M.1    Weber-Schehl, M.2    Pichl, L.3    Jork, C.4    Kress, J.5    Heiden, M.6    Funk, M.B.7    Nubling, C.M.8
  • 15
    • 77950485243 scopus 로고    scopus 로고
    • Correction of underquantification of human immunodeficiency virus type 1 load with the second version of the Roche Cobas AmpliPrep/Cobas TaqMan assay
    • De Bel A., Marissens D., Debaisieux L., Liesnard C., Van den Wijngaert S., Lauwers S., Pierard D. Correction of underquantification of human immunodeficiency virus type 1 load with the second version of the Roche Cobas AmpliPrep/Cobas TaqMan assay. J. Clin. Microbiol. 2010, 48:1337.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 1337
    • De Bel, A.1    Marissens, D.2    Debaisieux, L.3    Liesnard, C.4    Van den Wijngaert, S.5    Lauwers, S.6    Pierard, D.7
  • 23
    • 0032211741 scopus 로고    scopus 로고
    • Differences in HIV replication in CD4+ lymphocytes are not related to beta-chemokine production
    • Greco G., Barker E., Levy J.A. Differences in HIV replication in CD4+ lymphocytes are not related to beta-chemokine production. AIDS Res. Hum. Retroviruses 1998, 14:1407.
    • (1998) AIDS Res. Hum. Retroviruses , vol.14 , pp. 1407
    • Greco, G.1    Barker, E.2    Levy, J.A.3
  • 24
    • 79952414942 scopus 로고    scopus 로고
    • Global trends in molecular epidemiology of HIV-1 during 2000-2007
    • WHO-UNAIDS Network for HIV Isolation and Characterisation
    • Hemelaar J., Gouws E., Ghys P.D., Osmanov S., WHO-UNAIDS Network for HIV Isolation and Characterisation Global trends in molecular epidemiology of HIV-1 during 2000-2007. Aids 2011, 25:679.
    • (2011) Aids , vol.25 , pp. 679
    • Hemelaar, J.1    Gouws, E.2    Ghys, P.D.3    Osmanov, S.4
  • 25
    • 0037393440 scopus 로고    scopus 로고
    • Sequence characterization of the protease and partial reverse transcriptase proteins of the NED panel, an international HIV type 1 subtype reference and standards panel
    • Huang D.D., Giesler T.A., Bremer J.W. Sequence characterization of the protease and partial reverse transcriptase proteins of the NED panel, an international HIV type 1 subtype reference and standards panel. AIDS Res. Hum. Retroviruses 2003, 19:321.
    • (2003) AIDS Res. Hum. Retroviruses , vol.19 , pp. 321
    • Huang, D.D.1    Giesler, T.A.2    Bremer, J.W.3
  • 27
    • 38549170656 scopus 로고    scopus 로고
    • Short communication: identification of a novel HIV type 1 subtype H/J recombinant in Canada with discordant HIV viral load (RNA) values in three different commercial assays
    • Kim J.E., Beckthold B., Chen Z., Mihowich J., Malloch L., Gill M.J. Short communication: identification of a novel HIV type 1 subtype H/J recombinant in Canada with discordant HIV viral load (RNA) values in three different commercial assays. AIDS Res. Hum. Retroviruses 2007, 23:1309.
    • (2007) AIDS Res. Hum. Retroviruses , vol.23 , pp. 1309
    • Kim, J.E.1    Beckthold, B.2    Chen, Z.3    Mihowich, J.4    Malloch, L.5    Gill, M.J.6
  • 28
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 1980, 16:111.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111
    • Kimura, M.1
  • 29
    • 0028148319 scopus 로고
    • The World Health Organization Global Programme on AIDS proposal for standardization of HIV sequence nomenclature. WHO network for HIV isolation and characterization
    • Korber B.T., Osmanov S., Esparza J., Myers G. The World Health Organization Global Programme on AIDS proposal for standardization of HIV sequence nomenclature. WHO network for HIV isolation and characterization. AIDS Res. Hum. Retroviruses 1994, 10:1355.
    • (1994) AIDS Res. Hum. Retroviruses , vol.10 , pp. 1355
    • Korber, B.T.1    Osmanov, S.2    Esparza, J.3    Myers, G.4
  • 31
    • 34249031269 scopus 로고    scopus 로고
    • Could the new HIV combined p24 antigen and antibody assays replace p24 antigen specific assays?
    • Ly T.D., Ebel A., Faucher V., Fihman V., Laperche S. Could the new HIV combined p24 antigen and antibody assays replace p24 antigen specific assays?. J. Virol. Methods 2007, 143:86.
    • (2007) J. Virol. Methods , vol.143 , pp. 86
    • Ly, T.D.1    Ebel, A.2    Faucher, V.3    Fihman, V.4    Laperche, S.5
  • 32
    • 84865179130 scopus 로고    scopus 로고
    • The variable sensitivity of HIV Ag/Ab combination assays in the detection of p24Ag according to genotype could compromise the diagnosis of early HIV infection
    • Ly T.D., Plantier J.C., Leballais L., Gonzalo S., Lemee V., Laperche S. The variable sensitivity of HIV Ag/Ab combination assays in the detection of p24Ag according to genotype could compromise the diagnosis of early HIV infection. J. Clin. Virol. 2012, 55:121.
    • (2012) J. Clin. Virol. , vol.55 , pp. 121
    • Ly, T.D.1    Plantier, J.C.2    Leballais, L.3    Gonzalo, S.4    Lemee, V.5    Laperche, S.6
  • 37
    • 0033780046 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 spinoculation enhances infection through virus binding
    • O'Doherty U., Swiggard W.J., Malim M.H. Human immunodeficiency virus type 1 spinoculation enhances infection through virus binding. J. Virol. 2000, 74:10074.
    • (2000) J. Virol. , vol.74 , pp. 10074
    • O'Doherty, U.1    Swiggard, W.J.2    Malim, M.H.3
  • 38
    • 84878524128 scopus 로고    scopus 로고
    • Response to the AIDS pandemic-a global health model
    • Piot P., Quinn T.C. Response to the AIDS pandemic-a global health model. New Engl. J. Med. 2013, 368:2210.
    • (2013) New Engl. J. Med. , vol.368 , pp. 2210
    • Piot, P.1    Quinn, T.C.2
  • 42
    • 79954989310 scopus 로고    scopus 로고
    • Identification of new, emerging HIV-1 unique recombinant forms and drug resistant viruses circulating in Cameroon
    • Ragupathy V., Zhao J., Wood O., Tang S., Lee S., Nyambi P., Hewlett I. Identification of new, emerging HIV-1 unique recombinant forms and drug resistant viruses circulating in Cameroon. Virol. J. 2011, 8:185.
    • (2011) Virol. J. , vol.8 , pp. 185
    • Ragupathy, V.1    Zhao, J.2    Wood, O.3    Tang, S.4    Lee, S.5    Nyambi, P.6    Hewlett, I.7
  • 43
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406
    • Saitou, N.1    Nei, M.2
  • 49
    • 0028908784 scopus 로고
    • Effect of different donor cells on human immunodeficiency virus type 1 replication and selection in vitro
    • Spira A.I., Ho D.D. Effect of different donor cells on human immunodeficiency virus type 1 replication and selection in vitro. J. Virol. 1995, 69:422.
    • (1995) J. Virol. , vol.69 , pp. 422
    • Spira, A.I.1    Ho, D.D.2
  • 50
    • 0033789103 scopus 로고    scopus 로고
    • NAT of the United States and Canadian blood supply
    • Stramer S.L., Caglioti S., Strong D.M. NAT of the United States and Canadian blood supply. Transfusion 2000, 40:1165.
    • (2000) Transfusion , vol.40 , pp. 1165
    • Stramer, S.L.1    Caglioti, S.2    Strong, D.M.3
  • 53
    • 84906082392 scopus 로고    scopus 로고
    • Implementation of Good Clinical Laboratory Practice (GCLP) guidelines within the External Quality Assurance Program Oversight Laboratory (EQAPOL)
    • Todd C.A., et al. Implementation of Good Clinical Laboratory Practice (GCLP) guidelines within the External Quality Assurance Program Oversight Laboratory (EQAPOL). J. Immunol. Methods 2014, 409:91-98.
    • (2014) J. Immunol. Methods , vol.409 , pp. 91-98
    • Todd, C.A.1
  • 56
    • 0037311524 scopus 로고    scopus 로고
    • Nucleotide sequence analysis of the accessory genes of HIV-1 group O isolates
    • Vallejo A., Gurtler L., Zekeng L., Hewlett I.K. Nucleotide sequence analysis of the accessory genes of HIV-1 group O isolates. Virus Res. 2003, 91:189.
    • (2003) Virus Res. , vol.91 , pp. 189
    • Vallejo, A.1    Gurtler, L.2    Zekeng, L.3    Hewlett, I.K.4
  • 57
    • 0022967777 scopus 로고
    • CD8+ lymphocytes can control HIV infection in vitro by suppressing virus replication
    • Walker C.M., Moody D.J., Stites D.P., Levy J.A. CD8+ lymphocytes can control HIV infection in vitro by suppressing virus replication. Science 1986, 234:1563.
    • (1986) Science , vol.234 , pp. 1563
    • Walker, C.M.1    Moody, D.J.2    Stites, D.P.3    Levy, J.A.4
  • 60
    • 0025951014 scopus 로고
    • Polymorphic human gene(s) determines differential susceptibility of CD4 lymphocytes to infection by certain HIV-1 isolates
    • Williams L.M., Cloyd M.W. Polymorphic human gene(s) determines differential susceptibility of CD4 lymphocytes to infection by certain HIV-1 isolates. Virology 1991, 184:723.
    • (1991) Virology , vol.184 , pp. 723
    • Williams, L.M.1    Cloyd, M.W.2
  • 61
    • 77949563918 scopus 로고    scopus 로고
    • Performance of the automated COBAS AmpliPrep/COBAS TaqMan HIV-1 test on a genetically diverse panel of specimens from China: comparison to the COBAS amplicor HIV-1 monitor test, v1.5
    • Xu S., Song A., Li X., Nie J., Zhang C., Wang Y. Performance of the automated COBAS AmpliPrep/COBAS TaqMan HIV-1 test on a genetically diverse panel of specimens from China: comparison to the COBAS amplicor HIV-1 monitor test, v1.5. Intervirology 2010, 53:221.
    • (2010) Intervirology , vol.53 , pp. 221
    • Xu, S.1    Song, A.2    Li, X.3    Nie, J.4    Zhang, C.5    Wang, Y.6
  • 63
    • 77954340601 scopus 로고    scopus 로고
    • Prevalence, incidence, and residual risk of major blood-borne infections among apheresis collections to the American Red Cross Blood Services, 2004 through 2008
    • Zou S., Musavi F., Notari E.P., Stramer S.L., Dodd R.Y. Prevalence, incidence, and residual risk of major blood-borne infections among apheresis collections to the American Red Cross Blood Services, 2004 through 2008. Transfusion 2010, 50:1487.
    • (2010) Transfusion , vol.50 , pp. 1487
    • Zou, S.1    Musavi, F.2    Notari, E.P.3    Stramer, S.L.4    Dodd, R.Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.