메뉴 건너뛰기




Volumn 25, Issue 11, 2009, Pages 1187-1191

Near full-length genome characterization of a newly identified HIV type 1 subtype F variant circulating in St. Petersburg, Russia

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; CASE REPORT; FEMALE; GENE SEQUENCE; GENOME; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS 1 INFECTION; NUCLEOTIDE SEQUENCE; PERINATAL INFECTION; PHYLOGENY; PRIORITY JOURNAL; VIRUS IDENTIFICATION;

EID: 71949125027     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/aid.2009.0140     Document Type: Article
Times cited : (9)

References (20)
  • 2
    • 4344593704 scopus 로고    scopus 로고
    • Temporal trends in the HIV-1 epidemic in Russia: Predominance of subtype A
    • Bobkov AF, Kazennova EV, Selimova LM, et al.: Temporal trends in the HIV-1 epidemic in Russia: Predominance of subtype A. J Med Virol 2004;74:191-196.
    • (2004) J Med Virol , vol.74 , pp. 191-196
    • Bobkov, A.F.1    Kazennova, E.V.2    Selimova, L.M.3
  • 3
    • 25844452687 scopus 로고    scopus 로고
    • Analysis of drug resistance-associated mutations in treatment-naive individuals infected with different genetic forms of HIV-1 circulating in countries of the former Soviet Union
    • Vazquez de Parga, Rakhmanova A, Pérez-Álvarez L, et al.: Analysis of drug resistance-associated mutations in treatment-naive individuals infected with different genetic forms of HIV-1 circulating in countries of the former Soviet Union. J Med Virol 2005;77:337-344.
    • (2005) J Med Virol , vol.77 , pp. 337-344
    • De Vazquez, P.1    Rakhmanova, A.2    Pérez-Álvarez, L.3
  • 4
    • 37549044289 scopus 로고    scopus 로고
    • New insights into the origin of the HIV type 1 subtype A epidemic in former Soviet Union's countries derived from sequence analyses of preepidemically transmitted viruses
    • Thomson MM, Vázquez de Parga E, Vinogradova A, et al.: New insights into the origin of the HIV type 1 subtype A epidemic in former Soviet Union's countries derived from sequence analyses of preepidemically transmitted viruses. AIDS Res Hum Retroviruses 2007;23:1599-1604.
    • (2007) AIDS Res Hum Retroviruses , vol.23 , pp. 1599-1604
    • Thomson, M.M.1    Vázquez De Parga, E.2    Vinogradova, A.3
  • 5
    • 67651065516 scopus 로고    scopus 로고
    • Molecular epidemiology of HIV-1 in St. Petersburg, Russia: Predominance of subtype A, former Soviet Union variant, and identification of intrasubtype subclusters
    • Thomson MM, Vinogradova A, Delgado E, et al.: Molecular epidemiology of HIV-1 in St. Petersburg, Russia: Predominance of subtype A, former Soviet Union variant, and identification of intrasubtype subclusters. J Acquir Immune Defic Syndr 2009;5:332-339.
    • (2009) J Acquir Immune Defic Syndr , vol.5 , pp. 332-339
    • Thomson, M.M.1    Vinogradova, A.2    Delgado, E.3
  • 7
    • 0036232570 scopus 로고    scopus 로고
    • Identification of a newly characterized HIV-1 BG intersubtype circulating recombinant form in Galicia, Spain, which exhibits a pseudotype-like virion structure
    • Delgado E, Thomson MM, Villahermosa ML, et al.: Identification of a newly characterized HIV-1 BG intersubtype circulating recombinant form in Galicia, Spain, which exhibits a pseudotype-like virion structure. J Acquir Immune Defic Syndr 2002;29:536-543.
    • (2002) J Acquir Immune Defic Syndr , vol.29 , pp. 536-543
    • Delgado, E.1    Thomson, M.M.2    Villahermosa, M.L.3
  • 8
    • 20044366719 scopus 로고    scopus 로고
    • The analysis of near full-length genome sequences of human immunodeficiency virus type 1 BF intersubtype recombinant viruses from Chile, Venezuela and Spain reveals their relationship to diverse lineages of recombinant viruses related to CRF12-BF
    • Sierra M, Thomson MM, Rios M, et al.: The analysis of near full-length genome sequences of human immunodeficiency virus type 1 BF intersubtype recombinant viruses from Chile, Venezuela and Spain reveals their relationship to diverse lineages of recombinant viruses related to CRF12-BF. Infect Genet Evol 2005;5:209-217.
    • (2005) Infect Genet Evol , vol.5 , pp. 209-217
    • Sierra, M.1    Thomson, M.M.2    Rios, M.3
  • 9
    • 13744252890 scopus 로고    scopus 로고
    • MAFFT version 5: Improvement in accuracy of multiple sequence alignment
    • Katoh K, Kuma K, Toh H, and Miyata T: MAFFT version 5: Improvement in accuracy of multiple sequence alignment. Nucleic Acids Res 2005;33:511-518.
    • (2005) Nucleic Acids Res , vol.33 , pp. 511-518
    • Katoh, K.1    Kuma, K.2    Toh, H.3    Miyata, T.4
  • 10
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F and Huelsenbeck JP: MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003;19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 11
    • 0028793170 scopus 로고
    • Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning
    • Salminen MO, Carr JK, Burke DS, and McCutchan FE: Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res Human Retroviruses 1995;11:1423-1425.
    • (1995) AIDS Res Human Retroviruses , vol.11 , pp. 1423-1425
    • Salminen, M.O.1    Carr, J.K.2    Burke, D.S.3    McCutchan, F.E.4
  • 12
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S and Gascuel O: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003;52:696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 13
    • 0005045440 scopus 로고    scopus 로고
    • Los Alamos National Laboratory, Los Alamos, NM
    • HIV Sequence Database: Los Alamos National Laboratory, Los Alamos, NM. Available at http:==www.hiv-lanl.gov.
    • HIV Sequence Database
  • 14
    • 0030477197 scopus 로고    scopus 로고
    • Molecular epidemiology and MT-2 cell tropism of Russian HIV type 1 variant
    • Leitner T, Korovina G, Marquina S, et al.: Molecular epidemiology and MT-2 cell tropism of Russian HIV type 1 variant. AIDS Res Hum Retroviruses 1996;12:1595-1603.
    • (1996) AIDS Res Hum Retroviruses , vol.12 , pp. 1595-1603
    • Leitner, T.1    Korovina, G.2    Marquina, S.3
  • 15
    • 33947249173 scopus 로고    scopus 로고
    • The rate of epidemiological and virological changes during the transition from nascent to concentrated HIV epidemic stage in the former Soviet Union countries
    • Nabatov AA, Masharsky AE, Verevochkin SV, et al.: The rate of epidemiological and virological changes during the transition from nascent to concentrated HIV epidemic stage in the former Soviet Union countries. AIDS Res Hum Retroviruses 2007;23:183-192.
    • (2007) AIDS Res Hum Retroviruses , vol.23 , pp. 183-192
    • Nabatov, A.A.1    Masharsky, A.E.2    Verevochkin, S.V.3
  • 16
    • 33845427513 scopus 로고    scopus 로고
    • HIV epidemiology in the Northwestern Federal District of Russia: Dominance of HIV type 1 subtype A
    • Smolskaya T, Liitsola K, Zetterberg V, et al.: HIV epidemiology in the Northwestern Federal District of Russia: Dominance of HIV type 1 subtype A. AIDS Res Hum Retroviruses 2006;22:1074-1080.
    • (2006) AIDS Res Hum Retroviruses , vol.22 , pp. 1074-1080
    • Smolskaya, T.1    Liitsola, K.2    Zetterberg, V.3
  • 17
    • 33748743977 scopus 로고    scopus 로고
    • HIV Type 1 molecular epidemiology in Cuba: High genetic diversity, frequent mosaicism, and recent expansion of BG intersubtype recombinant forms
    • Pérez L, Thomson MM, Bleda MJ, et al.: HIV Type 1 molecular epidemiology in Cuba: High genetic diversity, frequent mosaicism, and recent expansion of BG intersubtype recombinant forms. AIDS Res Hum Retroviruses 2006;22: 724-733.
    • (2006) AIDS Res Hum Retroviruses , vol.22 , pp. 724-733
    • Pérez, L.1    Thomson, M.M.2    Bleda, M.J.3
  • 18
    • 43549093736 scopus 로고    scopus 로고
    • Evidence for different susceptibility to tripanavir and darunavir in patients infected with distinct HIV-1 subtypes
    • Poveda E, de Mendoza C, Perkin N, et al.: Evidence for different susceptibility to tripanavir and darunavir in patients infected with distinct HIV-1 subtypes. AIDS 2008;22: 611-616.
    • (2008) AIDS , vol.22 , pp. 611-616
    • Poveda, E.1    De Mendoza, C.2    Perkin, N.3
  • 20
    • 27544477733 scopus 로고    scopus 로고
    • Protease mutation M89I=V is linked to therapy failure in patients infected with the HIV-1 non-B subtypes C, F or G
    • Abecasis AB, Deforche K, Snoeck J, et al.: Protease mutation M89I=V is linked to therapy failure in patients infected with the HIV-1 non-B subtypes C, F or G. AIDS 2005;19:1799-1806.
    • (2005) AIDS , vol.19 , pp. 1799-1806
    • Abecasis, A.B.1    Deforche, K.2    Snoeck, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.