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Applied and Environmental Microbiology
Volumn 80, Issue 17, 2014, Pages 5282-5291
Wastewater irrigation increases the abundance of potentially harmful Gammaproteobacteria in soils in Mezquital Valley, Mexico
Author keywords

[No Author keywords available]
Indexed keywords

BACILLI; GENES; MICROORGANISMS; POLYMERASE CHAIN REACTION; RNA; SOIL MOISTURE; SULFUR COMPOUNDS;
EID: 84905899548     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01295-14     Document Type: Article
Times cited : (70)
References (86)
  • 1
    • 46549084570 scopus 로고    scopus 로고
    • Antibiotics and antibiotic resistance in water environments
    • Baquero F, Martínez J, Cantón R. 2008. Antibiotics and antibiotic resistance in water environments. Curr. Opin. Biotechnol. 19:260-265. http: //dx.doi.org/10.1016/j.copbio.2008.05.006.
    • (2008) Curr. Opin. Biotechnol , vol.19 , pp. 260-265
    • Baquero, F.1    Martínez, J.2    Cantón, R.3
  • 2
    • 84878112282 scopus 로고    scopus 로고
    • Sub-inhibitory concentrations of antibiotics and wastewater influencing biofilm formation and gene expression of multi-resistant Pseudomonas aeruginosa wastewater isolates
    • Bruchmann J, Kirchen S, Schwartz T. 2013. Sub-inhibitory concentrations of antibiotics and wastewater influencing biofilm formation and gene expression of multi-resistant Pseudomonas aeruginosa wastewater isolates. Environ. Sci. Pollut. Res. 20:3539-3549. http://dx.doi.org/10 .1007/s11356-013-1521-4.
    • (2013) Environ. Sci. Pollut. Res , vol.20 , pp. 3539-3549
    • Bruchmann, J.1    Kirchen, S.2    Schwartz, T.3
  • 3
    • 79954424084 scopus 로고    scopus 로고
    • The removal of microorganisms and organic micropollutants from wastewater during infiltration to aquifers after irrigation of farmland in the Tula Valley, Mexico
    • Chávez A, Maya C, Gibson R, Jiménez B. 2011. The removal of microorganisms and organic micropollutants from wastewater during infiltration to aquifers after irrigation of farmland in the Tula Valley, Mexico. Environ. Pollut. 159:1354-1362. http://dx.doi.org/10.1016/j.envpol.2011 .01.008.
    • (2011) Environ. Pollut , vol.159 , pp. 1354-1362
    • Chávez, A.1    Maya, C.2    Gibson, R.3    Jiménez, B.4
  • 6
    • 84873433431 scopus 로고    scopus 로고
    • Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: a review
    • Rizzo L, Manaia C, Merlin C, Schwartz T, Dagot C, Ploy IM, Fatta-Kassinos D. 2013. Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: a review. Sci. Total Environ. 447:345-360. http://dx.doi.org/10.1016/j .scitotenv.2013.01.032.
    • (2013) Sci. Total Environ , vol.447 , pp. 345-360
    • Rizzo, L.1    Manaia, C.2    Merlin, C.3    Schwartz, T.4    Dagot, C.5    Ploy, I.M.6    Fatta-Kassinos, D.7
  • 7
    • 80255137565 scopus 로고    scopus 로고
    • Microbial activity and organic matter dynamics during 4 years of irrigation with treated wastewater
    • Elifantz H, Kautsky L, Mor-Yosef M, Tarchitzky J, Bar-Tal A, Chen Y, Minz D. 2011. Microbial activity and organic matter dynamics during 4 years of irrigation with treated wastewater. Microb. Ecol. 62:973-981. http://dx.doi.org/10.1007/s00248-011-9867-y.
    • (2011) Microb. Ecol , vol.62 , pp. 973-981
    • Elifantz, H.1    Kautsky, L.2    Mor-Yosef, M.3    Tarchitzky, J.4    Bar-Tal, A.5    Chen, Y.6    Minz, D.7
  • 8
    • 84892967579 scopus 로고    scopus 로고
    • Resilience of soil bacterial community to irrigation with water of different qualities under Mediterranean climate
    • Frenk S, Hadar Y, Minz D. 2014. Resilience of soil bacterial community to irrigation with water of different qualities under Mediterranean climate. Environ. Microbiol. 16:559-569. http://dx.doi.org/10.1111/1462 -2920.12183.
    • (2014) Environ. Microbiol , vol.16 , pp. 559-569
    • Frenk, S.1    Hadar, Y.2    Minz, D.3
  • 9
    • 0028991224 scopus 로고
    • Environmental impact of wastewater irrigation in central Mexico: an overview
    • Siebe C, Cifuentes E. 1995. Environmental impact of wastewater irrigation in central Mexico: an overview. Int. J. Environ. Health Res. 5:161- 173. http://dx.doi.org/10.1080/09603129509356845.
    • (1995) Int. J. Environ. Health Res , vol.5
    • Siebe, C.1    Cifuentes, E.2
  • 10
    • 4444325236 scopus 로고    scopus 로고
    • Quality assessment of an aquifer recharged with wastewater for its potential use as drinking source: "El Mezquital Valley" case
    • Jimenez B, Chávez A. 2004. Quality assessment of an aquifer recharged with wastewater for its potential use as drinking source: "El Mezquital Valley" case. Water Sci. Technol. 50:269-276.
    • (2004) Water Sci. Technol. , vol.50 , pp. 269-276
    • Jimenez, B.1    Chávez, A.2
  • 11
    • 0039229975 scopus 로고    scopus 로고
    • Evolution of antibiotic resistance
    • Baquero F, Blázquez J. 1997. Evolution of antibiotic resistance. Trends Ecol. Evol. (Amst.) 12:482-487. http://dx.doi.org/10.1016/S0169-5347 (97)01223-8.
    • (1997) Trends Ecol. Evol. (Amst.) , vol.12 , pp. 482-487
    • Baquero, F.1    Blázquez, J.2
  • 12
    • 59649109572 scopus 로고    scopus 로고
    • Antibiotic resistance genes from the environment: a perspective through newly identified antibiotic resistance mechanisms in the clinical setting
    • Cantón R. 2009. Antibiotic resistance genes from the environment: a perspective through newly identified antibiotic resistance mechanisms in the clinical setting. Clin. Microbiol. Infect. 15:20-25. http://dx.doi.org/10 .1111/j.1469-0691.2008.02679.x.
    • (2009) Clin. Microbiol. Infect , vol.15 , pp. 20-25
    • Cantón, R.1
  • 13
    • 77957820588 scopus 로고    scopus 로고
    • Antibiotic resistance in the environment: a link to the clinic
    • Wright GD. 2010. Antibiotic resistance in the environment: a link to the clinic. Curr. Opin. Microbiol. 13:589-594. http://dx.doi.org/10.1016/j .mib.2010.08.005.
    • (2010) Curr. Opin. Microbiol , vol.13 , pp. 589-594
    • Wright, G.D.1
  • 14
    • 67650486955 scopus 로고    scopus 로고
    • The role of natural environments in the evolution of resistance traits in pathogenic bacteria
    • Martinez JL. 2009. The role of natural environments in the evolution of resistance traits in pathogenic bacteria. Proc. Biol. Sci. 276:2521-2530. http://dx.doi.org/10.1098/rspb.2009.0320.
    • (2009) Proc. Biol. Sci , vol.276 , pp. 2521-2530
    • Martinez, J.L.1
  • 15
    • 84878106162 scopus 로고    scopus 로고
    • Impact of treated wastewater irrigation on antibiotic resistance in the soil microbiome
    • Gatica J, Cytryn E. 2013. Impact of treated wastewater irrigation on antibiotic resistance in the soil microbiome. Environ. Sci. Pollut. Res. 20:3529-3538. http://dx.doi.org/10.1007/s11356-013-1505-4.
    • (2013) Environ. Sci. Pollut. Res , vol.20 , pp. 3529-3538
    • Gatica, J.1    Cytryn, E.2
  • 16
    • 60549109861 scopus 로고    scopus 로고
    • Antibiotic resistance genes in water environment
    • Zhang X, Zhang T, Fang HHP. 2009. Antibiotic resistance genes in water environment. Appl. Microbiol. Biotechnol. 82:397-414. http://dx.doi.org /10.1007/s00253-008-1829-z.
    • (2009) Appl. Microbiol. Biotechnol , vol.82 , pp. 397-414
    • Zhang, X.1    Zhang, T.2    Fang, H.H.P.3
  • 17
    • 31144458334 scopus 로고    scopus 로고
    • Sampling the antibiotic resistome
    • D'Costa VM, McGrann KM, Hughes DW, Wright GD. 2006. Sampling the antibiotic resistome. Science 311:374-377. http://dx.doi.org/10.1126 /science.1120800.
    • (2006) Science , vol.311 , pp. 374-377
    • D'Costa, V.M.1    McGrann, K.M.2    Hughes, D.W.3    Wright, G.D.4
  • 18
    • 0242711908 scopus 로고
    • Aminoglycoside antibiotic-inactivating enzymes in actinomycetes similar to those present in clinical isolates of antibiotic-resistant bacteria
    • Benveniste R, Davies J. 1973. Aminoglycoside antibiotic-inactivating enzymes in actinomycetes similar to those present in clinical isolates of antibiotic-resistant bacteria. Proc. Natl. Acad. Sci. U. S. A. 70:2276-2280. http://dx.doi.org/10.1073/pnas.70.8.2276.
    • (1973) Proc. Natl. Acad. Sci. U. S. A , vol.70 , pp. 2276-2280
    • Benveniste, R.1    Davies, J.2
  • 19
    • 33748678285 scopus 로고    scopus 로고
    • The CTX-M beta-lactamase pandemic
    • Cantón R, Coque TM. 2006. The CTX-M beta-lactamase pandemic. Curr. Opin. Microbiol. 9:466-475. http://dx.doi.org/10.1016/j.mib.2006 .08.011.
    • (2006) Curr. Opin. Microbiol , vol.9 , pp. 466-475
    • Cantón, R.1    Coque, T.M.2
  • 20
    • 0036721015 scopus 로고    scopus 로고
    • Beta-lactamases of Kluyvera ascorbata, probable progenitors of some plasmid-encoded CTX-M types
    • Humeniuk C, Arlet G, Gautier V, Grimont P, Labia R, Philippon A. 2002. Beta-lactamases of Kluyvera ascorbata, probable progenitors of some plasmid-encoded CTX-M types. Antimicrob. Agents Chemother. 46:3045-3049. http://dx.doi.org/10.1128/AAC.46.9.3045-3049.2002.
    • (2002) Antimicrob. Agents Chemother , vol.46 , pp. 3045-3049
    • Humeniuk, C.1    Arlet, G.2    Gautier, V.3    Grimont, P.4    Labia, R.5    Philippon, A.6
  • 21
    • 29444442953 scopus 로고    scopus 로고
    • Vibrionaceae as a possible source of Qnr-like quinolone resistance determinants
    • Poirel L, Liard A, Rodriguez-Martinez J, Nordmann P. 2005. Vibrionaceae as a possible source of Qnr-like quinolone resistance determinants. J. Antimicrob. Chemother. 56:1118-1121. http://dx.doi.org/10.1093/jac /dki371.
    • (2005) J. Antimicrob. Chemother , vol.56 , pp. 1118-1121
    • Poirel, L.1    Liard, A.2    Rodriguez-Martinez, J.3    Nordmann, P.4
  • 23
    • 52949122901 scopus 로고    scopus 로고
    • Predictive analysis of transmissible quinolone resistance indicates Stenotrophomonas maltophilia as a potential source of a novel family of Qnr determinants
    • Sánchez MB, Hernández A, Rodríguez-Martínez JM, Martínez-Martínez L, Martínez JL. 2008. Predictive analysis of transmissible quinolone resistance indicates Stenotrophomonas maltophilia as a potential source of a novel family of Qnr determinants. BMC Microbiol. 8:148. http://dx.doi.org/10.1186/1471-2180-8-148.
    • (2008) BMC Microbiol , vol.8 , pp. 148
    • Sánchez, M.B.1    Hernández, A.2    Rodríguez-Martínez, J.M.3    Martínez-Martínez, L.4    Martínez, J.L.5
  • 24
    • 33748885240 scopus 로고    scopus 로고
    • The worldwide emergence of plasmid-mediated quinolone resistance
    • Robicsek A, Jacoby GA, Hooper DC. 2006. The worldwide emergence of plasmid-mediated quinolone resistance. Lancet Infect. Dis. 6:629-640. http://dx.doi.org/10.1016/S1473-3099(06)70599-0.
    • (2006) Lancet Infect. Dis , vol.6 , pp. 629-640
    • Robicsek, A.1    Jacoby, G.A.2    Hooper, D.C.3
  • 25
    • 69249205465 scopus 로고    scopus 로고
    • Environmental pollution by antibiotics and by antibiotic resistance determinants
    • Martinez JL. 2009. Environmental pollution by antibiotics and by antibiotic resistance determinants. Environ. Pollut. 157:2893-2902. http://dx .doi.org/10.1016/j.envpol.2009.05.051.
    • (2009) Environ. Pollut , vol.157 , pp. 2893-2902
    • Martinez, J.L.1
  • 26
    • 77950596380 scopus 로고    scopus 로고
    • Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil
    • Eilers KG, Lauber CL, Knight R, Fierer N. 2010. Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil. Soil Biol. Biochem. 42:896-903. http://dx.doi.org /10.1016/j.soilbio.2010.02.003.
    • (2010) Soil Biol. Biochem , vol.42 , pp. 896-903
    • Eilers, K.G.1    Lauber, C.L.2    Knight, R.3    Fierer, N.4
  • 27
    • 84876423097 scopus 로고    scopus 로고
    • Accumulation of pharmaceuticals, Enterococcus, and resistance genes in soils irrigated with wastewater for zero to 100 years in central Mexico
    • Dalkmann P, Broszat M, Siebe C, Willaschek E, Sakinc T, Huebner J, Amelung W, Grohmann E, Siemens J. 2012. Accumulation of pharmaceuticals, Enterococcus, and resistance genes in soils irrigated with wastewater for zero to 100 years in central Mexico. PLoS One 7:e45397. http: //dx.doi.org/10.1371/journal.pone.0045397.
    • (2012) PLoS One , vol.7
    • Dalkmann, P.1    Broszat, M.2    Siebe, C.3    Willaschek, E.4    Sakinc, T.5    Huebner, J.6    Amelung, W.7    Grohmann, E.8    Siemens, J.9
  • 28
    • 0033853659 scopus 로고    scopus 로고
    • Sulfonamide resistance: mechanisms and trends
    • Sköld O. 2000. Sulfonamide resistance: mechanisms and trends. Drug Resist. Updat. 3:155-160. http://dx.doi.org/10.1054/drup.2000.0146.
    • (2000) Drug Resist. Updat , vol.3 , pp. 155-160
    • Sköld, O.1
  • 29
    • 84862184554 scopus 로고    scopus 로고
    • Variabilidad temporal en el contenido de metales pesados en suelos regados con aguas resiudales en el Valle del Mezquital: México.
    • Master's thesis. Universidad Nacional Autónoma de México, Mexico City, Mexico.
    • Chapela LM. 2010. Variabilidad temporal en el contenido de metales pesados en suelos regados con aguas resiudales en el Valle del Mezquital: México. Master's thesis. Universidad Nacional Autónoma de México, Mexico City, Mexico.
    • (2010)
    • Chapela, L.M.1
  • 30
    • 0003521444 scopus 로고
    • Bodenkundliches Praktikum
    • Eine Einführung in pedologisches Arbeiten für Oekologen, insbesondere Land- und Forstwirte, und für Geowissenschaftler. Blackwell Wissenschaft, Berlin, Germany.
    • Schlichting E, Blume HP, Stahr K. 1995. Bodenkundliches Praktikum. Eine Einführung in pedologisches Arbeiten für Oekologen, insbesondere Land- und Forstwirte, und für Geowissenschaftler. Blackwell Wissenschaft, Berlin, Germany.
    • (1995)
    • Schlichting, E.1    Blume, H.P.2    Stahr, K.3
  • 31
    • 77958542467 scopus 로고    scopus 로고
    • Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes
    • Will C, Thürmer A, Wollherr A, Nacke H, Herold N, Schrumpf M, Gutknecht J, Wubet T, Buscot F, Daniel R. 2010. Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes. Appl. Environ. Microbiol. 76:6751-6759. http://dx.doi.org/10.1128/AEM.01063-10.
    • (2010) Appl. Environ. Microbiol , vol.76 , pp. 6751-6759
    • Will, C.1    Thürmer, A.2    Wollherr, A.3    Nacke, H.4    Herold, N.5    Schrumpf, M.6    Gutknecht, J.7    Wubet, T.8    Buscot, F.9    Daniel, R.10
  • 32
    • 77957363077 scopus 로고    scopus 로고
    • Trends in antibiotic resistance genes occurrence in the Haihe River, China
    • Luo Y, Mao D, Rysz M, Zhou Q, Zhang H, Xu L, Alvarez PJJ. 2010. Trends in antibiotic resistance genes occurrence in the Haihe River, China. Environ. Sci. Technol. 44:7220 -7225. http://dx.doi.org/10 .1021/es100233w.
    • (2010) Environ. Sci. Technol , vol.44
    • Luo, Y.1    Mao, D.2    Rysz, M.3    Zhou, Q.4    Zhang, H.5    Xu, L.6    Alvarez, P.J.J.7
  • 33
    • 78649835541 scopus 로고    scopus 로고
    • Mise au point d'une technique de PCR en temps réel pour la détection rapide des gènes qnr chez des entérobactéries productrices de bêta-lactamases à spectre étendu
    • Guillard T, Cavallo JD, Cambau E, Duval V, Bajolet O, Brasme L, de Champs C, Vernet-Garnier V. 2010. Mise au point d'une technique de PCR en temps réel pour la détection rapide des gènes qnr chez des entérobactéries productrices de bêta-lactamases à spectre étendu. Pathol. Biol. 58:430-433. http://dx.doi.org/10.1016/j.patbio.2009.03.003.
    • (2010) Pathol. Biol , vol.58 , pp. 430-433
    • Guillard, T.1    Cavallo, J.D.2    Cambau, E.3    Duval, V.4    Bajolet, O.5    Brasme, L.6    de Champs, C.7    Vernet-Garnier, V.8
  • 34
    • 84885047742 scopus 로고    scopus 로고
    • The choice of PCR primers has great impact on assessments of bacterial community diversity and dynamics in a wastewater treatment plant
    • Fredriksson NJ, Hermansson M, Wilén B-M. 2013. The choice of PCR primers has great impact on assessments of bacterial community diversity and dynamics in a wastewater treatment plant. PLoS One 8:e76431. http: //dx.doi.org/10.1371/journal.pone.0076431.
    • (2013) PLoS One , vol.8
    • Fredriksson, N.J.1    Hermansson, M.2    Wilén, B.-M.3
  • 36
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In Stackebrandt E, Goodfellow M (ed), Nucleic acid techniques in bacterial systematics. Wiley, Chichester, New York.
    • Lane DJ. 1991. 16S/23S rRNA sequencing, p 115-175. In Stackebrandt E, Goodfellow M (ed), Nucleic acid techniques in bacterial systematics. Modern microbiological methods. Wiley, Chichester, New York.
    • (1991) Modern microbiological methods , pp. 115-175
    • Lane, D.J.1
  • 37
    • 0035431143 scopus 로고    scopus 로고
    • Effect of primers hybridizing to different evolutionarily conserved regions of the smallsubunit rRNA gene in PCR-based microbial community analyses and genetic profiling
    • Schmalenberger A, Schwieger F, Tebbe CC. 2001. Effect of primers hybridizing to different evolutionarily conserved regions of the smallsubunit rRNA gene in PCR-based microbial community analyses and genetic profiling. Appl. Environ. Microbiol. 67:3557-3563. http://dx.doi.org /10.1128/AEM.67.8.3557-3563.2001.
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 3557-3563
    • Schmalenberger, A.1    Schwieger, F.2    Tebbe, C.C.3
  • 39
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from highthroughput 699 sequencing reads
    • Martin M. 2011. Cutadapt removes adapter sequences from highthroughput 699 sequencing reads. EMBnet J. 17:10-12. http://dx.doi.org /10.14806/ej.17.1.200.
    • (2011) EMBnet J , vol.17 , pp. 10-12
    • Martin, M.1
  • 40
    • 79961181125 scopus 로고    scopus 로고
    • UCHIME improves sensitivity and speed of chimera detection
    • Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. 2011. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27: 2194-2200. http://dx.doi.org/10.1093/bioinformatics/btr381.
    • (2011) Bioinformatics , vol.27 , pp. 2194-2200
    • Edgar, R.C.1    Haas, B.J.2    Clemente, J.C.3    Quince, C.4    Knight, R.5
  • 42
    • 84860353306 scopus 로고    scopus 로고
    • Fast, accurate error-correction of amplicon pyrosequences using Acacia
    • Bragg L, Stone G, Imelfort M, Hugenholtz P, Tyson GW. 2012. Fast, accurate error-correction of amplicon pyrosequences using Acacia. Nat. Methods 9:425-426. http://dx.doi.org/10.1038/nmeth.1990.
    • (2012) Nat. Methods , vol.9 , pp. 425-426
    • Bragg, L.1    Stone, G.2    Imelfort, M.3    Hugenholtz, P.4    Tyson, G.W.5
  • 43
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460-2461. http://dx.doi.org/10.1093/bioinfo rmatics/btq461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 44
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, Glöckner FO. 2007. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res. 35:7188-7196. http://dx.doi.org/10.1093/nar/gkm864.
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6    Glöckner, F.O.7
  • 45
    • 0036712327 scopus 로고    scopus 로고
    • Estimating the number of species in a stochastic abundance model
    • Chao A, Bunge J. 2002. Estimating the number of species in a stochastic abundance model. Biometrics 58:531-539. http://dx.doi.org/10.1111/j .0006-341X.2002.00531.x.
    • (2002) Biometrics , vol.58 , pp. 531-539
    • Chao, A.1    Bunge, J.2
  • 46
    • 84856043672 scopus 로고
    • A mathematical theory of communication
    • Shannon CE. 1948. A mathematical theory of communication. Bell Syst. Tech. J. 27:379-423. http://dx.doi.org/10.1002/j.1538-7305.1948.tb01338.x.
    • (1948) Bell Syst. Tech. J , vol.27 , pp. 379-423
    • Shannon, C.E.1
  • 47
    • 34748886657 scopus 로고    scopus 로고
    • PAST: paleontological statistics software package for education and data analysis
    • Hammer Ø, Harper DAT, Ryan PD. 2001. PAST: paleontological statistics software package for education and data analysis. Palaeontol. Electron. 4:1-9.
    • (2001) Palaeontol. Electron. , vol.4 , pp. 1-9
    • Hammer, Ø.1    Harper, D.A.T.2    Ryan, P.D.3
  • 48
    • 29144464937 scopus 로고    scopus 로고
    • UniFrac: a new phylogenetic method for comparing microbial communities
    • Lozupone C, Knight R. 2005. UniFrac: a new phylogenetic method for comparing microbial communities. Appl. Environ. Microbiol. 71:8228- 8235. http://dx.doi.org/10.1128/AEM.71.12.8228-8235.2005.
    • (2005) Appl. Environ. Microbiol , vol.71
    • Lozupone, C.1    Knight, R.2
  • 50
    • 0142091777 scopus 로고    scopus 로고
    • A new enzymatic method for the detachment of particle associated soil bacteria
    • Böckelmann U, Szewzyk U, Grohmann E. 2003. A new enzymatic method for the detachment of particle associated soil bacteria. J. Microbiol. Methods 55:201-211. http://dx.doi.org/10.1016/S0167-7012(03) 00144-1.
    • (2003) J. Microbiol. Methods , vol.55 , pp. 201-211
    • Böckelmann, U.1    Szewzyk, U.2    Grohmann, E.3
  • 51
    • 0034053725 scopus 로고    scopus 로고
    • A greedy algorithm for aligningDNAsequences
    • Zhang Z, Schwartz S, Wagner L, Miller W. 2000. A greedy algorithm for aligningDNAsequences. J. Comput. Biol. 7:203-214. http://dx.doi.org/10 .1089/10665270050081478.
    • (2000) J. Comput. Biol , vol.7 , pp. 203-214
    • Zhang, Z.1    Schwartz, S.2    Wagner, L.3    Miller, W.4
  • 52
    • 84922968996 scopus 로고    scopus 로고
    • Performance standards for antimicrobial susceptibility testing; 22nd informational supplement
    • CLSI. Clinical and Laboratory Standards Institute, Wayne, P.A.
    • CLSI. 2012. Performance standards for antimicrobial susceptibility testing; 22nd informational supplement. CLSI document M100-S22. Clinical and Laboratory Standards Institute, Wayne, P.A.
    • (2012) CLSI document M100-S22
  • 53
    • 0033928314 scopus 로고    scopus 로고
    • Effects of long-term waste water irrigation on soil organic matter, soil microbial biomass and itsactivities in central Mexico
    • Friedel JK, Langer T, Siebe C, Stahr K. 2000. Effects of long-term waste water irrigation on soil organic matter, soil microbial biomass and itsactivities in central Mexico. Biol. Fertil. Soils 31:414-421. http://dx.doi .org/10.1007/s003749900188.
    • (2000) Biol. Fertil. Soils , vol.31 , pp. 414-421
    • Friedel, J.K.1    Langer, T.2    Siebe, C.3    Stahr, K.4
  • 54
    • 0023036658 scopus 로고
    • Prolonged effect of land disposal of human wastes on soil conditions
    • Saber M. 1986. Prolonged effect of land disposal of human wastes on soil conditions. Water Sci. Technol. 18:371-374.
    • (1986) Water Sci. Technol. , vol.18 , pp. 371-374
    • Saber, M.1
  • 55
    • 70449652408 scopus 로고    scopus 로고
    • Irrigation with treated wastewater: effects on soil, lettuce (Lactuca sativa L.) crop and dynamics of microorganisms
    • Mañas P, Castro E, de Las Heras J. 2009. Irrigation with treated wastewater: effects on soil, lettuce (Lactuca sativa L.) crop and dynamics of microorganisms. J. Environ. Sci. Health 44:1261-1273. http://dx.doi.org /10.1080/10934520903140033.
    • (2009) J. Environ. Sci. Health , vol.44 , pp. 1261-1273
    • Mañas, P.1    Castro, E.2    de Las Heras, J.3
  • 57
    • 43949144945 scopus 로고    scopus 로고
    • Effects of treated wastewater irrigation on the dissolved and soil organic carbon in Israeli soils
    • Jueschke E, Marschner B, Tarchitzky J, Chen Y. 2008. Effects of treated wastewater irrigation on the dissolved and soil organic carbon in Israeli soils. Water Sci. Technol. 57:727-733. http://dx.doi.org/10.2166/wst.2008 .173.
    • (2008) Water Sci. Technol , vol.57 , pp. 727-733
    • Jueschke, E.1    Marschner, B.2    Tarchitzky, J.3    Chen, Y.4
  • 58
    • 0009811473 scopus 로고
    • Akkumulation, Mobilität und Verfügbarkeit von Schwermetallen in langjährig mit städtischen Abwässern bewässerten Böden in Zentralmexiko
    • Universität Hohenheim, Stuttgart, Germany.
    • Siebe C. 1994. Akkumulation, Mobilität und Verfügbarkeit von Schwermetallen in langjährig mit städtischen Abwässern bewässerten Böden in Zentralmexiko. Hohenheimer Bodenkundliche Hefte 17. Universität Hohenheim, Stuttgart, Germany.
    • (1994) Hohenheimer Bodenkundliche Hefte 17
    • Siebe, C.1
  • 59
    • 0348008993 scopus 로고    scopus 로고
    • Characterization of effects of a long-term wastewater irrigation on soil quality by microbiological and biochemical parameters
    • Filip Z, Kanazawa S, Berthelin J. 1999. Characterization of effects of a long-term wastewater irrigation on soil quality by microbiological and biochemical parameters. J. Plant Nutr. Soil Sci. 162:409-413. http://dx.doi.org/10.1002/(SICI)1522-2624(199908)162:4_409::AID-JPLN409_ 3.0.CO;2-#.
    • (1999) J. Plant Nutr. Soil Sci , vol.162 , pp. 409-413
    • Filip, Z.1    Kanazawa, S.2    Berthelin, J.3
  • 60
    • 0010505240 scopus 로고    scopus 로고
    • Distribution of microorganisms, biomass ATP, and enzyme activities in organic and mineral particles of a long-term wastewater irrigated soil
    • Filip Z, Kanazawa S, Berthelin J. 2000. Distribution of microorganisms, biomass ATP, and enzyme activities in organic and mineral particles of a long-term wastewater irrigated soil. J. Plant Nutr. Soil Sci. 163:143-150. http://dx.doi.org/10.1002/(SICI)1522-2624(200004)163:2_143::AID-JP LN143_3.0.CO;2-T.
    • (2000) J. Plant Nutr. Soil Sci , vol.163 , pp. 143-150
    • Filip, Z.1    Kanazawa, S.2    Berthelin, J.3
  • 61
    • 77951243440 scopus 로고    scopus 로고
    • Soil DNA evidence for altered microbial diversity after long-term application of municipal wastewater
    • Hidri Y, Bouziri L, Maron P, Anane M, Jedidi N, Hassan A, Ranjard L. 2010. Soil DNA evidence for altered microbial diversity after long-term application of municipal wastewater. Agron. Sustain. Dev. 30:423-431. http://dx.doi.org/10.1051/agro/2009038.
    • (2010) Agron. Sustain. Dev , vol.30 , pp. 423-431
    • Hidri, Y.1    Bouziri, L.2    Maron, P.3    Anane, M.4    Jedidi, N.5    Hassan, A.6    Ranjard, L.7
  • 62
    • 59649097910 scopus 로고    scopus 로고
    • Extensive phylogenetic analysis of a soil bacterial community illustrates extreme taxon evenness and the effects of amplicon length, degree of coverage, and DNA fractionation on classification and ecological parameters
    • Morales SE, Cosart TF, Johnson JV, Holben WE. 2009. Extensive phylogenetic analysis of a soil bacterial community illustrates extreme taxon evenness and the effects of amplicon length, degree of coverage, and DNA fractionation on classification and ecological parameters. Appl. Environ. Microbiol. 75:668-675. http://dx.doi.org/10.1128/AEM.01757-08.
    • (2009) Appl. Environ. Microbiol , vol.75 , pp. 668-675
    • Morales, S.E.1    Cosart, T.F.2    Johnson, J.V.3    Holben, W.E.4
  • 63
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • Schloss PD, Handelsman J. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microbiol. 71:1501-1506. http://dx.doi.org/10 .1128/AEM.71.3.1501-1506.2005.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 64
    • 33644952722 scopus 로고    scopus 로고
    • Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes
    • Janssen PH. 2006. Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl. Environ. Microbiol. 72:1719- 1728. http://dx.doi.org/10.1128/AEM.72.3.1719-1728.2006.
    • (2006) Appl. Environ. Microbiol , vol.72
    • Janssen, P.H.1
  • 66
    • 84898541601 scopus 로고    scopus 로고
    • Land use type significantly affects microbial gene transcription in soil
    • Nacke H, Fischer C, Thürmer A, Meinicke P, Daniel R. 2014. Land use type significantly affects microbial gene transcription in soil. Microb. Ecol. 67:919-930. http://dx.doi.org/10.1007/s00248-014-0377-6.
    • (2014) Microb. Ecol , vol.67 , pp. 919-930
    • Nacke, H.1    Fischer, C.2    Thürmer, A.3    Meinicke, P.4    Daniel, R.5
  • 68
    • 42549171131 scopus 로고    scopus 로고
    • Federal funding for the study of antimicrobial resistance in nosocomial pathogens: no ESKAPE
    • Rice LB. 2008. Federal funding for the study of antimicrobial resistance in nosocomial pathogens: no ESKAPE. J. Infect. Dis. 197:1079-1081. http: //dx.doi.org/10.1086/533452.
    • (2008) J. Infect. Dis , vol.197 , pp. 1079-1081
    • Rice, L.B.1
  • 69
    • 69849097479 scopus 로고    scopus 로고
    • Stenotrophomonas maltophilia drug resistance
    • Sanchez MB, Hernandez A, Martinez JL. 2009. Stenotrophomonas maltophilia drug resistance. Future Microbiol. 4:655-660. http://dx.doi.org/10 .2217/fmb.09.45.
    • (2009) Future Microbiol , vol.4 , pp. 655-660
    • Sanchez, M.B.1    Hernandez, A.2    Martinez, J.L.3
  • 70
    • 0031983930 scopus 로고    scopus 로고
    • Microbiological and clinical aspects of infectionassociated with Stenotrophomonas maltophilia
    • Denton M, Kerr KG. 1998. Microbiological and clinical aspects of infectionassociated with Stenotrophomonas maltophilia. Clin. Microbiol. Rev. 11:57-80.
    • (1998) Clin. Microbiol. Rev. , vol.11 , pp. 57-80
    • Denton, M.1    Kerr, K.G.2
  • 71
    • 84855650410 scopus 로고    scopus 로고
    • Stenotrophomonas maltophilia: an emerging global opportunistic pathogen
    • Brooke JS. 2012. Stenotrophomonas maltophilia: an emerging global opportunistic pathogen. Clin. Microbiol. Rev. 25:2-41. http://dx.doi.org/10 .1128/CMR.00019-11.
    • (2012) Clin. Microbiol. Rev , vol.25 , pp. 2-41
    • Brooke, J.S.1
  • 72
    • 0343621539 scopus 로고    scopus 로고
    • Multiple antibiotic resistance in Stenotrophomonas maltophilia: involvement of a multidrug efflux system
    • Zhang L, Li XZ, Poole K. 2000. Multiple antibiotic resistance in Stenotrophomonas maltophilia: involvement of a multidrug efflux system. Antimicrob. Agents Chemother. 44:287-293. http://dx.doi.org/10.1128 /AAC.44.2.287-293.2000.
    • (2000) Antimicrob. Agents Chemother , vol.44 , pp. 287-293
    • Zhang, L.1    Li, X.Z.2    Poole, K.3
  • 73
    • 79953742137 scopus 로고    scopus 로고
    • Culture-dependent and culture-independent assessment of bacteria in the apple phyllosphere
    • Yashiro E, Spear RN, McManus PS. 2011. Culture-dependent and culture-independent assessment of bacteria in the apple phyllosphere. J. Appl. Microbiol. 110:1284-1296. http://dx.doi.org/10.1111/j.1365-2672 .2011.04975.x.
    • (2011) J. Appl. Microbiol , vol.110 , pp. 1284-1296
    • Yashiro, E.1    Spear, R.N.2    McManus, P.S.3
  • 74
    • 84874313665 scopus 로고    scopus 로고
    • Diversity of bacteria and archaea from a landfill in Chandigarh, India as revealed by culture-dependent and culture-independent molecular approaches
    • Krishnamurthi S, Chakrabarti T. 2013. Diversity of bacteria and archaea from a landfill in Chandigarh, India as revealed by culture-dependent and culture-independent molecular approaches. Syst. Appl. Microbiol. 36:56-68. http://dx.doi.org/10.1016/j.syapm.2012.08.009.
    • (2013) Syst. Appl. Microbiol , vol.36 , pp. 56-68
    • Krishnamurthi, S.1    Chakrabarti, T.2
  • 75
    • 0036195306 scopus 로고    scopus 로고
    • Molecular and culture-based analyses of prokaryotic communities from an agricultural soil and the burrows and casts of the earthworm Lumbricus rubellus
    • Furlong MA, Singleton DR, Coleman DC, Whitman WB. 2002. Molecular and culture-based analyses of prokaryotic communities from an agricultural soil and the burrows and casts of the earthworm Lumbricus rubellus. Appl. Environ. Microbiol. 68:1265-1279. http://dx.doi.org/10 .1128/AEM.68.3.1265-1279.2002.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 1265-1279
    • Furlong, M.A.1    Singleton, D.R.2    Coleman, D.C.3    Whitman, W.B.4
  • 76
    • 0033853212 scopus 로고    scopus 로고
    • Prevalence and expression of enterotoxins in Bacillus cereus and other Bacillus spp., a literature review
    • McKillip JL. 2000. Prevalence and expression of enterotoxins in Bacillus cereus and other Bacillus spp., a literature review. Antonie Van Leeuwenhoek 77:393-399. http://dx.doi.org/10.1023/A:1002706906154.
    • (2000) Antonie Van Leeuwenhoek , vol.77 , pp. 393-399
    • McKillip, J.L.1
  • 77
    • 0033004376 scopus 로고    scopus 로고
    • Method for purification of bacterial endospores from soils: UV resistance of natural Sonoran desert soil populations of Bacillus sp
    • Nicholson WL, Law JF. 1999. Method for purification of bacterial endospores from soils: UV resistance of natural Sonoran desert soil populations of Bacillus spp. with reference to B. subtilis strain 168. J. Microbiol. Methods 35:13-21. http://dx.doi.org/10.1016/S0167-7012(98)00097-9.
    • (1999) with reference to B. subtilis strain 168. J. Microbiol. Methods , vol.35 , pp. 13-21
    • Nicholson, W.L.1    Law, J.F.2
  • 78
    • 1642343401 scopus 로고    scopus 로고
    • Spore UV and acceleration resistance of endolithic Bacillus pumilus and Bacillus subtilis isolates obtained from Sonoran desert basalt: implications for lithopanspermia
    • Benardini JN, Sawyer J, Venkateswaran K, Nicholson WL. 2003. Spore UV and acceleration resistance of endolithic Bacillus pumilus and Bacillus subtilis isolates obtained from Sonoran desert basalt: implications for lithopanspermia. Astrobiology 3:709-717. http://dx.doi.org/10.1089 /153110703322736033.
    • (2003) Astrobiology , vol.3 , pp. 709-717
    • Benardini, J.N.1    Sawyer, J.2    Venkateswaran, K.3    Nicholson, W.L.4
  • 79
    • 0033081949 scopus 로고    scopus 로고
    • Mechanisms of fluoroquinolone resistance
    • Hooper DC. 1999. Mechanisms of fluoroquinolone resistance. Drug Resist. Updat. 2:38-55. http://dx.doi.org/10.1054/drup.1998.0068.
    • (1999) Drug Resist. Updat , vol.2 , pp. 38-55
    • Hooper, D.C.1
  • 80
    • 79958828699 scopus 로고    scopus 로고
    • Antibiotic contamination and occurrence of antibiotic-resistant bacteria in aquatic environments of northern Vietnam
    • Hoa PTP, Managaki S, Nakada N, Takada H, Shimizu A, Anh DH, Viet PH, Suzuki S. 2011. Antibiotic contamination and occurrence of antibiotic-resistant bacteria in aquatic environments of northern Vietnam. Sci. Total Environ. 409:2894-2901. http://dx.doi.org/10.1016/j.scitotenv .2011.04.030.
    • (2011) Sci. Total Environ , vol.409 , pp. 2894-2901
    • Hoa, P.T.P.1    Managaki, S.2    Nakada, N.3    Takada, H.4    Shimizu, A.5    Anh, D.H.6    Viet, P.H.7    Suzuki, S.8
  • 81
    • 52949132996 scopus 로고    scopus 로고
    • Detection of the sul1, sul2, and sul3 genes in sulfonamide-resistant bacteria from wastewater and shrimp ponds of north Vietnam
    • Phuong Hoa PT, Nonaka L, Hung Viet P, Suzuki S. 2008. Detection of the sul1, sul2, and sul3 genes in sulfonamide-resistant bacteria from wastewater and shrimp ponds of north Vietnam. Sci. Total Environ. 405:377- 384. http://dx.doi.org/10.1016/j.scitotenv.2008.06.023.
    • (2008) Sci. Total Environ , vol.405
    • Phuong Hoa, P.T.1    Nonaka, L.2    Hung Viet, P.3    Suzuki, S.4
  • 82
    • 34548141841 scopus 로고    scopus 로고
    • Susceptibility of Bacillus anthracis, Bacillus cereus, Bacillus mycoides, Bacillus pseudomycoides and Bacillus thuringiensis to 24 antimicrobials using Sensititre automated microbroth dilution and Etest agar gradient diffusion methods
    • Luna VA, King DS, Gulledge J, Cannons AC, Amuso PT, Cattani J. 2007. Susceptibility of Bacillus anthracis, Bacillus cereus, Bacillus mycoides, Bacillus pseudomycoides and Bacillus thuringiensis to 24 antimicrobials using Sensititre automated microbroth dilution and Etest agar gradient diffusion methods. J. Antimicrob. Chemother. 60:555-567. http://dx.doi.org /10.1093/jac/dkm213.
    • (2007) J. Antimicrob. Chemother , vol.60 , pp. 555-567
    • Luna, V.A.1    King, D.S.2    Gulledge, J.3    Cannons, A.C.4    Amuso, P.T.5    Cattani, J.6
  • 83
    • 84899799753 scopus 로고    scopus 로고
    • Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine
    • Ding GC, Radl V, Schloter-Hai B, Jechalke S, Heuer H, Smalla K, Schloter M. 2014. Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine. PLoS One 9:e92958. http://dx.doi.org/10.1371/journal.pone.0092958.
    • (2014) PLoS One , vol.9
    • Ding, G.C.1    Radl, V.2    Schloter-Hai, B.3    Jechalke, S.4    Heuer, H.5    Smalla, K.6    Schloter, M.7
  • 84
    • 1642280421 scopus 로고    scopus 로고
    • Overexpression of the multidrug efflux pump SmeDEF impairs Stenotrophomonas maltophilia physiology
    • Alonso A. 2004. Overexpression of the multidrug efflux pump SmeDEF impairs Stenotrophomonas maltophilia physiology. J. Antimicrob. Chemother. 53:432-434. http://dx.doi.org/10.1093/jac/dkh074.
    • (2004) J. Antimicrob. Chemother , vol.53 , pp. 432-434
    • Alonso, A.1
  • 85
    • 0035093095 scopus 로고    scopus 로고
    • Of Pseudomonas, porins, pumps and carbapenems
    • Livermore DM. 2001. Of Pseudomonas, porins, pumps and carbapenems. J. Antimicrob. Chemother. 47:247-250. http://dx.doi.org/10.1093/jac/47 .3.247.
    • (2001) J. Antimicrob. Chemother , vol.47 , pp. 247-250
    • Livermore, D.M.1
  • 86
    • 84905908340 scopus 로고    scopus 로고
    • DIN 58940-3:2007-10
    • agar diffusion test German Institute for Standardization, Berlin, Germany. German Institute for Standardization.
    • German Institute for Standardization. 2007. DIN 58940-3:2007-10. Medical microbiology-susceptibility testing of microbial pathogens to antimicrobial agents. Part 3: agar diffusion test. German Institute for Standardization, Berlin, Germany.
    • (2007) Medical microbiology-susceptibility testing of microbial pathogens to antimicrobial agents. Part , vol.3

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