-
1
-
-
0002558837
-
Taxonomy and physiology of phototrophic purple bacteria and green sulfur bacteria
-
Blankenship RE, Madigan MT, Bauer CE, eds. The Netherlands: Kluwer Academic Publishers
-
Imhoff JF. Taxonomy and physiology of phototrophic purple bacteria and green sulfur bacteria. In: Blankenship RE, Madigan MT, Bauer CE, eds. Anoxygenic photosynthetic bacteria Dordrecht, The Netherlands: Kluwer Academic Publishers, 1995:1-15.
-
(1995)
Anoxygenic Photosynthetic Bacteria Dordrecht
, pp. 1-15
-
-
Imhoff, J.F.1
-
2
-
-
0032469905
-
Control of photosystem formation in Rhodobacter sphaeroides
-
PMID:9603864
-
Zeilstra-Ryalls J, Gomelsky M, Eraso JM, Yeliseev A, O'Gara J, Kaplan S. Control of photosystem formation in Rhodobacter sphaeroides. J Bacteriol 1998; 180:2801-9; PMID:9603864
-
(1998)
J Bacteriol
, vol.180
, pp. 2801-2809
-
-
Zeilstra-Ryalls, J.1
Gomelsky, M.2
Eraso, J.M.3
Yeliseev, A.4
O'Gara, J.5
Kaplan, S.6
-
3
-
-
73949145723
-
Compartmentalized function through cell differentiation in filamentous cyanobacteria
-
PMID:19966815
-
Flores E, Herrero A. Compartmentalized function through cell differentiation in filamentous cyanobacteria. Nat Rev Microbiol 2010; 8:39-50; PMID:19966815; http://dx.doi.org/10.1038/nrmicro2242
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 39-50
-
-
Flores, E.1
Herrero, A.2
-
5
-
-
0030606608
-
Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential proteincoding regions (supplement)
-
PMID:8905238
-
Kaneko T, Sato S, Kotani H, Tanaka A, Asamizu E, Nakamura Y, Miyajima N, Hirosawa M, Sugiura M, Sasamoto S, et al. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential proteincoding regions (supplement). DNA Res 1996; 3:185-209; PMID:8905238; http://dx.doi.org/10.1093/dnares/3.3.185
-
(1996)
DNA Res
, vol.3
, pp. 185-209
-
-
Kaneko, T.1
Sato, S.2
Kotani, H.3
Tanaka, A.4
Asamizu, E.5
Nakamura, Y.6
Miyajima, N.7
Hirosawa, M.8
Sugiura, M.9
Sasamoto, S.10
-
6
-
-
0033009854
-
Prochlorococcus a marine photosynthetic prokaryote of global significance
-
PMID:10066832
-
Partensky F, Hess WR, Vaulot D. Prochlorococcus a marine photosynthetic prokaryote of global significance. Microbiol Mol Biol Rev 1999; 63:106-27; PMID:10066832
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 106-127
-
-
Partensky, F.1
Hess, W.R.2
Vaulot, D.3
-
7
-
-
34548491646
-
Code and context: Prochlorococcus as a model for cross-scale biology
-
PMID:17693088
-
Coleman ML, Chisholm SW. Code and context: Prochlorococcus as a model for cross-scale biology. Trends Microbiol 2007; 15:398-407; PMID:17693088; http://dx.doi.org/10.1016/j.tim.2007.07.001
-
(2007)
Trends Microbiol
, vol.15
, pp. 398-407
-
-
Coleman, M.L.1
Chisholm, S.W.2
-
8
-
-
0032482462
-
Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes
-
PMID:9624000
-
Moore LR, Rocap G, Chisholm SW. Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes. Nature 1998; 393:464-7; PMID:9624000; http://dx.doi.org/10.1038/30965
-
(1998)
Nature
, vol.393
, pp. 464-467
-
-
Moore, L.R.1
Rocap, G.2
Chisholm, S.W.3
-
9
-
-
0042878464
-
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
-
PMID:12917642
-
Rocap G, Larimer FW, Lamerdin J, Malfatti S, Chain P, Ahlgren NA, Arellano A, Coleman M, Hauser L, Hess WR, et al. Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature 2003; 424:1042-7; PMID:12917642; http://dx.doi.org/10.1038/nature01947
-
(2003)
Nature
, vol.424
, pp. 1042-1047
-
-
Rocap, G.1
Larimer, F.W.2
Lamerdin, J.3
Malfatti, S.4
Chain, P.5
Ahlgren, N.A.6
Arellano, A.7
Coleman, M.8
Hauser, L.9
Hess, W.R.10
-
10
-
-
50849096398
-
The challenge of regulation in a minimal photoautotroph: Non-coding RNAs in Prochlorococcus
-
PMID:18769676
-
Steglich C, Futschik ME, Lindell D, Voss B, Chisholm SW, Hess WR. The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus. PLoS Genet 2008; 4:e1000173; PMID:18769676; http://dx.doi.org/10.1371/journal.pgen.1000173
-
(2008)
PLoS Genet
, vol.4
-
-
Steglich, C.1
Futschik, M.E.2
Lindell, D.3
Voss, B.4
Chisholm, S.W.5
Hess, W.R.6
-
11
-
-
79959753938
-
Singlet oxygen stress in microorganisms
-
PMID:21722793
-
Glaeser J, Nuss AM, Berghoff BA, Klug G. Singlet oxygen stress in microorganisms. Adv Microb Physiol 2011; 58:141-73; PMID:21722793; http://dx.doi.org/10.1016/B978-0-12-381043-4.00004-0
-
(2011)
Adv Microb Physiol
, vol.58
, pp. 141-173
-
-
Glaeser, J.1
Nuss, A.M.2
Berghoff, B.A.3
Klug, G.4
-
12
-
-
84879422944
-
The molecular mechanisms and physiological consequences of oxidative stress: Lessons from a model bacterium
-
PMID:23712352
-
Imlay JA. The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium. Nat Rev Microbiol 2013; 11:443-54; PMID:23712352; http://dx.doi.org/10.1038/nrmicro3032
-
(2013)
Nat Rev Microbiol
, vol.11
, pp. 443-454
-
-
Imlay, J.A.1
-
13
-
-
0027329062
-
The phycobilisome, a light-harvesting complex responsive to environmental conditions
-
PMID:8246846
-
Grossman AR, Schaefer MR, Chiang GG, Collier JL. The phycobilisome, a light-harvesting complex responsive to environmental conditions. Microbiol Rev 1993; 57:725-49; PMID:8246846
-
(1993)
Microbiol Rev
, vol.57
, pp. 725-749
-
-
Grossman, A.R.1
Schaefer, M.R.2
Chiang, G.G.3
Collier, J.L.4
-
14
-
-
0033160940
-
Photomovement of the gliding cyanobacterium Synechocystis sp. PCC 6803
-
PMID:10420848
-
Choi JS, Chung YH, Moon YJ, Kim C, Watanabe M, Song PS, Joe CO, Bogorad L, Park YM. Photomovement of the gliding cyanobacterium Synechocystis sp. PCC 6803. Photochem Photobiol 1999; 70:95-102; PMID:10420848; http://dx.doi.org/10. 1111/j.1751-1097.1999.tb01954.x
-
(1999)
Photochem Photobiol
, vol.70
, pp. 95-102
-
-
Choi, J.S.1
Chung, Y.H.2
Moon, Y.J.3
Kim, C.4
Watanabe, M.5
Song, P.S.6
Joe, C.O.7
Bogorad, L.8
Park, Y.M.9
-
15
-
-
0018406010
-
Investigations on the phototactic orientation of Anabaena variabilis
-
Nultsch W, Schuchart H, Höhl M. Investigations on the phototactic orientation of Anabaena variabilis. Arch Microbiol 1979; 122:85-91; http://dx.doi.org/10.1007/BF00408050
-
(1979)
Arch Microbiol
, vol.122
, pp. 85-91
-
-
Nultsch, W.1
Schuchart, H.2
Höhl, M.3
-
16
-
-
0027190489
-
Circadian rhythms in prokaryotes: Luciferase as a reporter of circadian gene expression in cyanobacteria
-
PMID:8516317
-
Kondo T, Strayer CA, Kulkarni RD, Taylor W, Ishiura M, Golden SS, Johnson CH. Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci U S A 1993; 90:5672-6; PMID:8516317; http://dx.doi.org/10.1073/pnas.90.12.5672
-
(1993)
Proc Natl Acad Sci U S A
, vol.90
, pp. 5672-5676
-
-
Kondo, T.1
Strayer, C.A.2
Kulkarni, R.D.3
Taylor, W.4
Ishiura, M.5
Golden, S.S.6
Johnson, C.H.7
-
17
-
-
67650434032
-
The Yfr2 ncRNA family, a group of abundant RNA molecules widely conserved in cyanobacteria
-
PMID:19502815
-
Gierga G, Voss B, Hess WR. The Yfr2 ncRNA family, a group of abundant RNA molecules widely conserved in cyanobacteria. RNA Biol 2009; 6:222-7; PMID:19502815; http://dx.doi.org/10.4161/rna.6.3.8921
-
(2009)
RNA Biol
, vol.6
, pp. 222-227
-
-
Gierga, G.1
Voss, B.2
Hess, W.R.3
-
18
-
-
63749124071
-
Biocomputational prediction of non-coding RNAs in model cyanobacteria
-
PMID:19309518
-
Voss B, Georg J, Schön V, Ude S, Hess WR. Biocomputational prediction of non-coding RNAs in model cyanobacteria. BMC Genomics 2009; 10:123; PMID:19309518; http://dx.doi.org/10.1186/1471-2164-10-123
-
(2009)
BMC Genomics
, vol.10
, pp. 123
-
-
Voss, B.1
Georg, J.2
Schön, V.3
Ude, S.4
Hess, W.R.5
-
19
-
-
84863987120
-
Non-coding RNAs in marine Synechococcus and their regulation under environmentally relevant stress conditions
-
PMID:22258101
-
Gierga G, Voss B, Hess WR. Non-coding RNAs in marine Synechococcus and their regulation under environmentally relevant stress conditions. ISME J 2012; 6:1544-57; PMID:22258101; http://dx.doi.org/10.1038/ismej.2011.215
-
(2012)
ISME J
, vol.6
, pp. 1544-1557
-
-
Gierga, G.1
Voss, B.2
Hess, W.R.3
-
20
-
-
29044436786
-
Identification of cyanobacterial noncoding RNAs by comparative genome analysis
-
PMID:16168080
-
Axmann IM, Kensche P, Vogel J, Kohl S, Herzel H, Hess WR. Identification of cyanobacterial noncoding RNAs by comparative genome analysis. Genome Biol 2005; 6:R73; PMID:16168080; http://dx.doi.org/10.1186/gb-2005-6-9-r73
-
(2005)
Genome Biol
, vol.6
-
-
Axmann, I.M.1
Kensche, P.2
Vogel, J.3
Kohl, S.4
Herzel, H.5
Hess, W.R.6
-
21
-
-
84879639724
-
Integrative "omics"-approach discovers dynamic and regulatory features of bacterial stress responses
-
PMID:23818867
-
Berghoff BA, Konzer A, Mank NN, Looso M, Rische T, Förstner KU, Krüger M, Klug G. Integrative "omics"-approach discovers dynamic and regulatory features of bacterial stress responses. PLoS Genet 2013; 9:e1003576; PMID:23818867; http://dx.doi.org/10.1371/journal.pgen.1003576
-
(2013)
PLoS Genet
, vol.9
-
-
Berghoff, B.A.1
Konzer, A.2
Mank, N.N.3
Looso, M.4
Rische, T.5
Förstner, K.U.6
Krüger, M.7
Klug, G.8
-
22
-
-
70349462763
-
Evidence for a major role of antisense RNAs in cyanobacterial gene regulation
-
PMID:19756044
-
Georg J, Voss B, Scholz I, Mitschke J, Wilde A, Hess WR. Evidence for a major role of antisense RNAs in cyanobacterial gene regulation. Mol Syst Biol 2009; 5:305; PMID:19756044; http://dx.doi.org/10.1038/msb.2009.63
-
(2009)
Mol Syst Biol
, vol.5
, pp. 305
-
-
Georg, J.1
Voss, B.2
Scholz, I.3
Mitschke, J.4
Wilde, A.5
Hess, W.R.6
-
23
-
-
79952174199
-
An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803
-
PMID:21245330
-
Mitschke J, Georg J, Scholz I, Sharma CM, Dienst D, Bantscheff J, Voss B, Steglich C, Wilde A, Vogel J, et al. An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803. Proc Natl Acad Sci U S A 2011; 108:2124-9; PMID:21245330; http://dx.doi.org/10.1073/pnas.1015154108
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 2124-2129
-
-
Mitschke, J.1
Georg, J.2
Scholz, I.3
Sharma, C.M.4
Dienst, D.5
Bantscheff, J.6
Voss, B.7
Steglich, C.8
Wilde, A.9
Vogel, J.10
-
24
-
-
72049118448
-
Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides
-
PMID:19906181
-
Berghoff BA, Glaeser J, Sharma CM, Vogel J, Klug G. Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides. Mol Microbiol 2009; 74:1497-512; PMID:19906181; http://dx.doi.org/10.1111/j.1365-2958.2009. 06949.x
-
(2009)
Mol Microbiol
, vol.74
, pp. 1497-1512
-
-
Berghoff, B.A.1
Glaeser, J.2
Sharma, C.M.3
Vogel, J.4
Klug, G.5
-
25
-
-
84865594221
-
Transcriptome and proteome dynamics of a light-dark synchronized bacterial cell cycle
-
PMID:22952681
-
Waldbauer JR, Rodrigue S, Coleman ML, Chisholm SW. Transcriptome and proteome dynamics of a light-dark synchronized bacterial cell cycle. PLoS One 2012; 7:e43432; PMID:22952681; http://dx.doi.org/10.1371/journal.pone.0043432
-
(2012)
PLoS One
, vol.7
-
-
Waldbauer, J.R.1
Rodrigue, S.2
Coleman, M.L.3
Chisholm, S.W.4
-
26
-
-
84875521277
-
Insights into the physiology and ecology of the brackish-water-adapted Cyanobacterium Nodularia spumigena CCY9414 based on a genometranscriptome analysis
-
PMID:23555932
-
Voss B, Bolhuis H, Fewer DP, Kopf M, Möke F, Haas F, El-Shehawy R, Hayes P, Bergman B, Sivonen K, et al. Insights into the physiology and ecology of the brackish-water-adapted Cyanobacterium Nodularia spumigena CCY9414 based on a genometranscriptome analysis. PLoS One 2013; 8:e60224; PMID:23555932; http://dx.doi.org/10.1371/journal.pone.0060224
-
(2013)
PLoS One
, vol.8
-
-
Voss, B.1
Bolhuis, H.2
Fewer, D.P.3
Kopf, M.4
Möke, F.5
Haas, F.6
El-Shehawy, R.7
Hayes, P.8
Bergman, B.9
Sivonen, K.10
-
27
-
-
84055214198
-
Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp. PCC7120
-
PMID:22135468
-
Mitschke J, Vioque A, Haas F, Hess WR, Muro-Pastor AM. Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp. PCC7120. Proc Natl Acad Sci U S A 2011; 108:20130-5; PMID:22135468; http://dx.doi.org/10.1073/pnas.1112724108
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 20130-20135
-
-
Mitschke, J.1
Vioque, A.2
Haas, F.3
Hess, W.R.4
Muro-Pastor, A.M.5
-
28
-
-
41749103319
-
Small non-coding RNAs in Caulobacter crescentus
-
PMID:18373523
-
Landt SG, Abeliuk E, McGrath PT, Lesley JA, McAdams HH, Shapiro L. Small non-coding RNAs in Caulobacter crescentus. Mol Microbiol 2008; 68:600-14; PMID:18373523; http://dx.doi.org/10.1111/j.1365-2958.2008.06172.x
-
(2008)
Mol Microbiol
, vol.68
, pp. 600-614
-
-
Landt, S.G.1
Abeliuk, E.2
McGrath, P.T.3
Lesley, J.A.4
McAdams, H.H.5
Shapiro, L.6
-
29
-
-
76949103628
-
Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array
-
PMID:20089193
-
Vercruysse M, Fauvart M, Cloots L, Engelen K, Thijs IM, Marchal K, Michiels J. Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array. BMC Genomics 2010; 11:53; PMID:20089193; http://dx.doi.org/10. 1186/1471-2164-11-53
-
(2010)
BMC Genomics
, vol.11
, pp. 53
-
-
Vercruysse, M.1
Fauvart, M.2
Cloots, L.3
Engelen, K.4
Thijs, I.M.5
Marchal, K.6
Michiels, J.7
-
30
-
-
77949425194
-
The primary transcriptome of the major human pathogen Helicobacter pylori
-
PMID:20164839
-
Sharma CM, Hoffmann S, Darfeuille F, Reignier J, Findeiss S, Sittka A, Chabas S, Reiche K, Hackermüller J, Reinhardt R, et al. The primary transcriptome of the major human pathogen Helicobacter pylori . Nature 2010; 464:250-5; PMID:20164839; http://dx.doi.org/10.1038/nature08756
-
(2010)
Nature
, vol.464
, pp. 250-255
-
-
Sharma, C.M.1
Hoffmann, S.2
Darfeuille, F.3
Reignier, J.4
Findeiss, S.5
Sittka, A.6
Chabas, S.7
Reiche, K.8
Hackermüller, J.9
Reinhardt, R.10
-
31
-
-
76049099044
-
Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability
-
PMID:19996181
-
Jäger D, Sharma CM, Thomsen J, Ehlers C, Vogel J, Schmitz RA. Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability. Proc Natl Acad Sci U S A 2009; 106:21878-82; PMID:19996181; http://dx.doi.org/10.1073/pnas.0909051106
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 21878-21882
-
-
Jäger, D.1
Sharma, C.M.2
Thomsen, J.3
Ehlers, C.4
Vogel, J.5
Schmitz, R.A.6
-
32
-
-
78049393967
-
Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism
-
PMID:20511587
-
Bohn C, Rigoulay C, Chabelskaya S, Sharma CM, Marchais A, Skorski P, Borezée-Durant E, Barbet R, Jacquet E, Jacq A, et al. Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism. Nucleic Acids Res 2010; 38:6620-36; PMID:20511587; http://dx.doi.org/10.1093/nar/gkq462
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 6620-6636
-
-
Bohn, C.1
Rigoulay, C.2
Chabelskaya, S.3
Sharma, C.M.4
Marchais, A.5
Skorski, P.6
Borezée-Durant, E.7
Barbet, R.8
Jacquet, E.9
Jacq, A.10
-
33
-
-
78049392640
-
Identification of regulatory RNAs in Bacillus subtilis
-
PMID:20525796
-
Irnov I, Sharma CM, Vogel J, Winkler WC. Identification of regulatory RNAs in Bacillus subtilis . Nucleic Acids Res 2010; 38:6637-51; PMID:20525796; http://dx.doi.org/10.1093/nar/gkq454
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 6637-6651
-
-
Irnov, I.1
Sharma, C.M.2
Vogel, J.3
Winkler, W.C.4
-
34
-
-
77950349491
-
Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome
-
PMID:19923228
-
Albrecht M, Sharma CM, Reinhardt R, Vogel J, Rudel T. Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome. Nucleic Acids Res 2010; 38:868-77; PMID:19923228; http://dx.doi.org/10.1093/nar/gkp1032
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 868-877
-
-
Albrecht, M.1
Sharma, C.M.2
Reinhardt, R.3
Vogel, J.4
Rudel, T.5
-
35
-
-
80053649020
-
The transcriptional landscape of Chlamydia pneumoniae
-
PMID:21989159
-
Albrecht M, Sharma CM, Dittrich MT, Müller T, Reinhardt R, Vogel J, Rudel T. The transcriptional landscape of Chlamydia pneumoniae. Genome Biol 2011; 12:R98; PMID:21989159; http://dx.doi.org/10.1186/gb-2011-12-10-r98
-
(2011)
Genome Biol
, vol.12
-
-
Albrecht, M.1
Sharma, C.M.2
Dittrich, M.T.3
Müller, T.4
Reinhardt, R.5
Vogel, J.6
Rudel, T.7
-
36
-
-
84858400338
-
Genomewide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions
-
PMID:22080557
-
Schmidtke C, Findeiss S, Sharma CM, Kuhfuss J, Hoffmann S, Vogel J, Stadler PF, Bonas U. Genomewide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions. Nucleic Acids Res 2012; 40:2020-31; PMID:22080557; http://dx.doi.org/10.1093/nar/gkr904
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 2020-2031
-
-
Schmidtke, C.1
Findeiss, S.2
Sharma, C.M.3
Kuhfuss, J.4
Hoffmann, S.5
Vogel, J.6
Stadler, P.F.7
Bonas, U.8
-
37
-
-
84855836835
-
Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens
-
PMID:22336765
-
Wilms I, Overlöper A, Nowrousian M, Sharma CM, Narberhaus F. Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens. RNA Biol 2012; 9:446-57; PMID:22336765; http://dx.doi.org/10.4161/rna.17212
-
(2012)
RNA Biol
, vol.9
, pp. 446-457
-
-
Wilms, I.1
Overlöper, A.2
Nowrousian, M.3
Sharma, C.M.4
Narberhaus, F.5
-
38
-
-
84856777234
-
Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis
-
PMID:22258152
-
Madhugiri R, Pessi G, Voss B, Hahn J, Sharma CM, Reinhardt R, Vogel J, Hess WR, Fischer HM, Evguenieva-Hackenberg E. Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis. RNA Biol 2012; 9:47-58; PMID:22258152; http://dx.doi.org/10.4161/rna.9.1.18008
-
(2012)
RNA Biol
, vol.9
, pp. 47-58
-
-
Madhugiri, R.1
Pessi, G.2
Voss, B.3
Hahn, J.4
Sharma, C.M.5
Reinhardt, R.6
Vogel, J.7
Hess, W.R.8
Fischer, H.M.9
Evguenieva-Hackenberg, E.10
-
39
-
-
77952022168
-
Overlapping alternative sigma factor regulons in the response to singlet oxygen in Rhodobacter sphaeroides
-
PMID:20304993
-
Nuss AM, Glaeser J, Berghoff BA, Klug G. Overlapping alternative sigma factor regulons in the response to singlet oxygen in Rhodobacter sphaeroides. J Bacteriol 2010; 192:2613-23; PMID:20304993; http://dx.doi.org/10.1128/JB.01605- 09
-
(2010)
J Bacteriol
, vol.192
, pp. 2613-2623
-
-
Nuss, A.M.1
Glaeser, J.2
Berghoff, B.A.3
Klug, G.4
-
40
-
-
84867095346
-
Regulation of bacterial photosynthesis genes by the small noncoding RNA PcrZ
-
PMID:22988125
-
Mank NN, Berghoff BA, Hermanns YN, Klug G. Regulation of bacterial photosynthesis genes by the small noncoding RNA PcrZ. Proc Natl Acad Sci U S A 2012; 109:16306-11; PMID:22988125; http://dx.doi.org/10.1073/pnas.1207067109
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 16306-16311
-
-
Mank, N.N.1
Berghoff, B.A.2
Hermanns, Y.N.3
Klug, G.4
-
41
-
-
84874172103
-
CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving three Cas6 and a Cmr2 protein
-
Scholz I, Lange SJ, Hein S, Hess WR, Backofen R. CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving three Cas6 and a Cmr2 protein. PloS One 2013; 8:e56470; http://dx.doi.org/10.1371/journal.pone.0056470
-
(2013)
PloS One
, vol.8
-
-
Scholz, I.1
Lange, S.J.2
Hein, S.3
Hess, W.R.4
Backofen, R.5
-
42
-
-
84867900166
-
Heterocyst differentiation: From single mutants to global approaches
-
PMID:22898147
-
Muro-Pastor AM, Hess WR. Heterocyst differentiation: from single mutants to global approaches. Trends Microbiol 2012; 20:548-57; PMID:22898147; http://dx.doi.org/10.1016/j.tim.2012.07.005
-
(2012)
Trends Microbiol
, vol.20
, pp. 548-557
-
-
Muro-Pastor, A.M.1
Hess, W.R.2
-
43
-
-
77951765424
-
Heterocyst-specific transcription of NsiR1, a non-coding RNA encoded in a tandem array of direct repeats in cyanobacteria
-
PMID:20227418
-
Ionescu D, Voss B, Oren A, Hess WR, Muro-Pastor AM. Heterocyst-specific transcription of NsiR1, a non-coding RNA encoded in a tandem array of direct repeats in cyanobacteria. J Mol Biol 2010; 398:177-88; PMID:20227418; http://dx.doi.org/10.1016/j.jmb.2010.03.010
-
(2010)
J Mol Biol
, vol.398
, pp. 177-188
-
-
Ionescu, D.1
Voss, B.2
Oren, A.3
Hess, W.R.4
Muro-Pastor, A.M.5
-
44
-
-
0035088812
-
The hetF gene product is essential to heterocyst differentiation and affects HetR function in the cyanobacterium Nostoc punctiforme
-
PMID:11274126
-
Wong FC, Meeks JC. The hetF gene product is essential to heterocyst differentiation and affects HetR function in the cyanobacterium Nostoc punctiforme. J Bacteriol 2001; 183:2654-61; PMID:11274126; http://dx.doi.org/10. 1128/JB.183.8.2654-2661.2001
-
(2001)
J Bacteriol
, vol.183
, pp. 2654-2661
-
-
Wong, F.C.1
Meeks, J.C.2
-
46
-
-
39149142575
-
CRISPR - A widespread system that provides acquired resistance against phages in bacteria and archaea
-
PMID:18157154
-
Sorek R, Kunin V, Hugenholtz P. CRISPR - a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat Rev Microbiol 2008; 6:181-6; PMID:18157154; http://dx.doi.org/10.1038/nrmicro1793
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 181-186
-
-
Sorek, R.1
Kunin, V.2
Hugenholtz, P.3
-
47
-
-
0027976503
-
prrA, a putative response regulator involved in oxygen regulation of photosynthesis gene expression in Rhodobacter sphaeroides
-
PMID:8282708
-
Eraso JM, Kaplan S. prrA, a putative response regulator involved in oxygen regulation of photosynthesis gene expression in Rhodobacter sphaeroides. J Bacteriol 1994; 176:32-43; PMID:8282708
-
(1994)
J Bacteriol
, vol.176
, pp. 32-43
-
-
Eraso, J.M.1
Kaplan, S.2
-
48
-
-
0030467956
-
Complex regulatory activities associated with the histidine kinase PrrB in expression of photosynthesis genes in Rhodobacter sphaeroides 2.4.1
-
PMID:8955382
-
Eraso JM, Kaplan S. Complex regulatory activities associated with the histidine kinase PrrB in expression of photosynthesis genes in Rhodobacter sphaeroides 2.4.1. J Bacteriol 1996; 178:7037-46; PMID:8955382
-
(1996)
J Bacteriol
, vol.178
, pp. 7037-7046
-
-
Eraso, J.M.1
Kaplan, S.2
-
49
-
-
84874979900
-
A mixed incoherent feed-forward loop contributes to the regulation of bacterial photosynthesis genes
-
PMID:23392242
-
Mank NN, Berghoff BA, Klug G. A mixed incoherent feed-forward loop contributes to the regulation of bacterial photosynthesis genes. RNA Biol 2013; 10:347-52; PMID:23392242; http://dx.doi.org/10.4161/rna.23769
-
(2013)
RNA Biol
, vol.10
, pp. 347-352
-
-
Mank, N.N.1
Berghoff, B.A.2
Klug, G.3
-
50
-
-
58149503635
-
RpoH(II) activates oxidative-stress defense systems and is controlled by RpoE in the singlet oxygen-dependent response in Rhodobacter sphaeroides
-
PMID:18978062
-
Nuss AM, Glaeser J, Klug G. RpoH(II) activates oxidative-stress defense systems and is controlled by RpoE in the singlet oxygen-dependent response in Rhodobacter sphaeroides. J Bacteriol 2009; 191:220-30; PMID:18978062; http://dx.doi.org/10.1128/JB.00925-08
-
(2009)
J Bacteriol
, vol.191
, pp. 220-230
-
-
Nuss, A.M.1
Glaeser, J.2
Klug, G.3
-
52
-
-
34547199027
-
Protein synthesis patterns reveal a complex regulatory response to singlet oxygen in Rhodobacter
-
PMID:17536848
-
Glaeser J, Zobawa M, Lottspeich F, Klug G. Protein synthesis patterns reveal a complex regulatory response to singlet oxygen in Rhodobacter. J Proteome Res 2007; 6:2460-71; PMID:17536848; http://dx.doi.org/10.1021/pr060624p
-
(2007)
J Proteome Res
, vol.6
, pp. 2460-2471
-
-
Glaeser, J.1
Zobawa, M.2
Lottspeich, F.3
Klug, G.4
-
53
-
-
18144373854
-
A transcriptional response to singlet oxygen, a toxic byproduct of photosynthesis
-
PMID:15855269
-
Anthony JR, Warczak KL, Donohue TJ. A transcriptional response to singlet oxygen, a toxic byproduct of photosynthesis. Proc Natl Acad Sci U S A 2005; 102:6502-7; PMID:15855269; http://dx.doi.org/10.1073/pnas.0502225102
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 6502-6507
-
-
Anthony, J.R.1
Warczak, K.L.2
Donohue, T.J.3
-
54
-
-
84864701507
-
Role of the Irr protein in the regulation of iron metabolism in Rhodobacter sphaeroides
-
PMID:22879920
-
Peuser V, Remes B, Klug G. Role of the Irr protein in the regulation of iron metabolism in Rhodobacter sphaeroides. PLoS One 2012; 7:e42231; PMID:22879920; http://dx.doi.org/10.1371/journal.pone.0042231
-
(2012)
PLoS One
, vol.7
-
-
Peuser, V.1
Remes, B.2
Klug, G.3
-
55
-
-
84883772639
-
Comparative genomics boosts target prediction for bacterial small RNAs
-
PMID:23980183
-
Wright PR, Richter AS, Papenfort K, Mann M, Vogel J, Hess WR, Backofen R, Georg J. Comparative genomics boosts target prediction for bacterial small RNAs. Proc Natl Acad Sci U S A 2013; 110:E3487-96; PMID:23980183; http://dx.doi.org/10.1073/pnas.1303248110
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
-
-
Wright, P.R.1
Richter, A.S.2
Papenfort, K.3
Mann, M.4
Vogel, J.5
Hess, W.R.6
Backofen, R.7
Georg, J.8
-
56
-
-
85011941303
-
Computational prediction of sRNAs and their targets in bacteria
-
PMID:20061798
-
Backofen R, Hess WR. Computational prediction of sRNAs and their targets in bacteria. RNA Biol 2010; 7:33-42; PMID:20061798; http://dx.doi.org/10.4161/ rna.7.1.10655
-
(2010)
RNA Biol
, vol.7
, pp. 33-42
-
-
Backofen, R.1
Hess, W.R.2
-
57
-
-
38049182828
-
A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria
-
PMID:17941988
-
Voss B, Gierga G, Axmann IM, Hess WR. A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria. BMC Genomics 2007; 8:375; PMID:17941988; http://dx.doi.org/10. 1186/1471-2164-8-375
-
(2007)
BMC Genomics
, vol.8
, pp. 375
-
-
Voss, B.1
Gierga, G.2
Axmann, I.M.3
Hess, W.R.4
-
58
-
-
34548758619
-
A cyanobacterial non-coding RNA, Yfr1, is required for growth under multiple stress conditions
-
PMID:17664182
-
Nakamura T, Naito K, Yokota N, Sugita C, Sugita M. A cyanobacterial non-coding RNA, Yfr1, is required for growth under multiple stress conditions. Plant Cell Physiol 2007; 48:1309-18; PMID:17664182; http://dx.doi.org/10.1093/ pcp/pcm098
-
(2007)
Plant Cell Physiol
, vol.48
, pp. 1309-1318
-
-
Nakamura, T.1
Naito, K.2
Yokota, N.3
Sugita, C.4
Sugita, M.5
-
59
-
-
0037166350
-
Genes essential to sodium-dependent bicarbonate transport in cyanobacteria: Function and phylogenetic analysis
-
PMID:11904298
-
Shibata M, Katoh H, Sonoda M, Ohkawa H, Shimoyama M, Fukuzawa H, Kaplan A, Ogawa T. Genes essential to sodium-dependent bicarbonate transport in cyanobacteria: function and phylogenetic analysis. J Biol Chem 2002; 277:18658-64; PMID:11904298; http://dx.doi.org/10.1074/jbc.M112468200
-
(2002)
J Biol Chem
, vol.277
, pp. 18658-18664
-
-
Shibata, M.1
Katoh, H.2
Sonoda, M.3
Ohkawa, H.4
Shimoyama, M.5
Fukuzawa, H.6
Kaplan, A.7
Ogawa, T.8
-
60
-
-
75249107453
-
Seed-based INTARNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1
-
PMID:19850757
-
Richter AS, Schleberger C, Backofen R, Steglich C. Seed-based INTARNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1. Bioinformatics 2010; 26:1-5; PMID:19850757; http://dx.doi.org/ 10.1093/bioinformatics/btp609
-
(2010)
Bioinformatics
, vol.26
, pp. 1-5
-
-
Richter, A.S.1
Schleberger, C.2
Backofen, R.3
Steglich, C.4
-
61
-
-
33646471951
-
An internal antisense RNA regulates expression of the photosynthesis gene isiA
-
PMID:16636284
-
Dühring U, Axmann IM, Hess WR, Wilde A. An internal antisense RNA regulates expression of the photosynthesis gene isiA. Proc Natl Acad Sci U S A 2006; 103:7054-8; PMID:16636284; http://dx.doi.org/10.1073/pnas.0600927103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 7054-7058
-
-
Dühring, U.1
Axmann, I.M.2
Hess, W.R.3
Wilde, A.4
-
62
-
-
55949097145
-
Small RNAs establish delays and temporal thresholds in gene expression
-
PMID:18599624
-
Legewie S, Dienst D, Wilde A, Herzel H, Axmann IM. Small RNAs establish delays and temporal thresholds in gene expression. Biophys J 2008; 95:3232-8; PMID:18599624; http://dx.doi.org/10.1529/biophysj.108.133819
-
(2008)
Biophys J
, vol.95
, pp. 3232-3238
-
-
Legewie, S.1
Dienst, D.2
Wilde, A.3
Herzel, H.4
Axmann, I.M.5
-
63
-
-
84863321262
-
Operon flv4-flv2 provides cyanobacterial photosystem II with flexibility of electron transfer
-
PMID:22570444
-
Zhang P, Eisenhut M, Brandt AM, Carmel D, Silén HM, Vass I, Allahverdiyeva Y, Salminen TA, Aro EM. Operon flv4-flv2 provides cyanobacterial photosystem II with flexibility of electron transfer. Plant Cell 2012; 24:1952-71; PMID:22570444; http://dx.doi.org/10.1105/tpc.111.094417
-
(2012)
Plant Cell
, vol.24
, pp. 1952-1971
-
-
Zhang, P.1
Eisenhut, M.2
Brandt, A.M.3
Carmel, D.4
Silén, H.M.5
Vass, I.6
Allahverdiyeva, Y.7
Salminen, T.A.8
Aro, E.M.9
-
64
-
-
65449190158
-
Flavodiiron proteins in oxygenic photosynthetic organisms: Photoprotection of photosystem II by Flv2 and Flv4 in Synechocystis sp. PCC 6803
-
PMID:19390625
-
Zhang P, Allahverdiyeva Y, Eisenhut M, Aro EM. Flavodiiron proteins in oxygenic photosynthetic organisms: photoprotection of photosystem II by Flv2 and Flv4 in Synechocystis sp. PCC 6803. PLoS One 2009; 4:e5331; PMID:19390625; http://dx.doi.org/10.1371/journal.pone.0005331
-
(2009)
PLoS One
, vol.4
-
-
Zhang, P.1
Allahverdiyeva, Y.2
Eisenhut, M.3
Aro, E.M.4
-
65
-
-
84866931878
-
The antisense RNA As1-flv4 in the Cyanobacterium Synechocystis sp. PCC 6803 prevents premature expression of the flv4-2 operon upon shift in inorganic carbon supply
-
PMID:22854963
-
Eisenhut M, Georg J, Klähn S, Sakurai I, Mustila H, Zhang P, Hess WR, Aro EM. The antisense RNA As1-flv4 in the Cyanobacterium Synechocystis sp. PCC 6803 prevents premature expression of the flv4-2 operon upon shift in inorganic carbon supply. J Biol Chem 2012; 287:33153-62; PMID:22854963; http://dx.doi.org/10.1074/jbc.M112.391755
-
(2012)
J Biol Chem
, vol.287
, pp. 33153-33162
-
-
Eisenhut, M.1
Georg, J.2
Klähn, S.3
Sakurai, I.4
Mustila, H.5
Zhang, P.6
Hess, W.R.7
Aro, E.M.8
-
66
-
-
84867135315
-
Positive regulation of psbA gene expression by cis-encoded antisense RNAs in Synechocystis sp. PCC 6803
-
PMID:22858634
-
Sakurai I, Stazic D, Eisenhut M, Vuorio E, Steglich C, Hess WR, Aro EM. Positive regulation of psbA gene expression by cis-encoded antisense RNAs in Synechocystis sp. PCC 6803. Plant Physiol 2012; 160:1000-10; PMID:22858634; http://dx.doi.org/10.1104/pp.112.202127
-
(2012)
Plant Physiol
, vol.160
, pp. 1000-1010
-
-
Sakurai, I.1
Stazic, D.2
Eisenhut, M.3
Vuorio, E.4
Steglich, C.5
Hess, W.R.6
Aro, E.M.7
-
67
-
-
0013685329
-
Expression of a family of psbA genes encoding a photosystem II polypeptide in the cyanobacterium Anacystis nidulans R2
-
PMID:3098559
-
Golden SS, Brusslan J, Haselkorn R. Expression of a family of psbA genes encoding a photosystem II polypeptide in the cyanobacterium Anacystis nidulans R2. EMBO J 1986; 5:2789-98; PMID:3098559
-
(1986)
EMBO J
, vol.5
, pp. 2789-2798
-
-
Golden, S.S.1
Brusslan, J.2
Haselkorn, R.3
-
68
-
-
82755187254
-
Strategies for psbA gene expression in cyanobacteria, green algae and higher plants: From transcription to PSII repair
-
PMID:21565160
-
Mulo P, Sakurai I, Aro EM. Strategies for psbA gene expression in cyanobacteria, green algae and higher plants: from transcription to PSII repair. Biochim Biophys Acta 2012; 1817:247-57; PMID:21565160; http://dx.doi.org/10. 1016/j.bbabio.2011.04.011
-
(2012)
Biochim Biophys Acta
, vol.1817
, pp. 247-257
-
-
Mulo, P.1
Sakurai, I.2
Aro, E.M.3
-
69
-
-
34547850614
-
Dark-induced mRNA instability involves RNase E/G-type endoribonuclease cleavage at the AU-box and SD sequences in cyanobacteria
-
PMID:17661085
-
Horie Y, Ito Y, Ono M, Moriwaki N, Kato H, Hamakubo Y, Amano T, Wachi M, Shirai M, Asayama M. Dark-induced mRNA instability involves RNase E/G-type endoribonuclease cleavage at the AU-box and SD sequences in cyanobacteria. Mol Genet Genomics 2007; 278:331-46; PMID:17661085; http://dx.doi.org/10.1007/ s00438-007-0254-9
-
(2007)
Mol Genet Genomics
, vol.278
, pp. 331-346
-
-
Horie, Y.1
Ito, Y.2
Ono, M.3
Moriwaki, N.4
Kato, H.5
Hamakubo, Y.6
Amano, T.7
Wachi, M.8
Shirai, M.9
Asayama, M.10
-
70
-
-
0035339670
-
An AU-box motif upstream of the SD sequence of light-dependent psbA transcripts confers mRNA instability in darkness in cyanobacteria
-
PMID:11328866
-
Agrawal GK, Kato H, Asayama M, Shirai M. An AU-box motif upstream of the SD sequence of light-dependent psbA transcripts confers mRNA instability in darkness in cyanobacteria. Nucleic Acids Res 2001; 29:1835-43; PMID:11328866; http://dx.doi.org/10.1093/nar/29.9.1835
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 1835-1843
-
-
Agrawal, G.K.1
Kato, H.2
Asayama, M.3
Shirai, M.4
-
71
-
-
0023448458
-
OOP RNA, produced from multicopy plasmids, inhibits lambda cII gene expression through an RNase III-dependent mechanism
-
PMID:2962901
-
Krinke L, Wulff DL. OOP RNA, produced from multicopy plasmids, inhibits lambda cII gene expression through an RNase III-dependent mechanism. Genes Dev 1987; 1:1005-13; PMID:2962901; http://dx.doi.org/10.1101/gad.1.9.1005
-
(1987)
Genes Dev
, vol.1
, pp. 1005-1013
-
-
Krinke, L.1
Wulff, D.L.2
-
72
-
-
77956095145
-
An antisense RNA in a lytic cyanophage links psbA to a gene encoding a homing endonuclease
-
PMID:20410936
-
Millard AD, Gierga G, Clokie MR, Evans DJ, Hess WR, Scanlan DJ. An antisense RNA in a lytic cyanophage links psbA to a gene encoding a homing endonuclease. ISME J 2010; 4:1121-35; PMID:20410936; http://dx.doi.org/10.1038/ ismej.2010.43
-
(2010)
ISME J
, vol.4
, pp. 1121-1135
-
-
Millard, A.D.1
Gierga, G.2
Clokie, M.R.3
Evans, D.J.4
Hess, W.R.5
Scanlan, D.J.6
-
73
-
-
59349112725
-
A free-standing homing endonuclease targets an intron insertion site in the psbA gene of cyanophages
-
PMID:19200728
-
Zeng Q, Bonocora RP, Shub DA. A free-standing homing endonuclease targets an intron insertion site in the psbA gene of cyanophages. Curr Biol 2009; 19:218-22; PMID:19200728; http://dx.doi.org/10.1016/j.cub.2008.11.069
-
(2009)
Curr Biol
, vol.19
, pp. 218-222
-
-
Zeng, Q.1
Bonocora, R.P.2
Shub, D.A.3
-
74
-
-
34548513271
-
Genome-wide expression dynamics of a marine virus and host reveal features of coevolution
-
PMID:17805294
-
Lindell D, Jaffe JD, Coleman ML, Futschik ME, Axmann IM, Rector T, Kettler G, Sullivan MB, Steen R, Hess WR, et al. Genome-wide expression dynamics of a marine virus and host reveal features of coevolution. Nature 2007; 449:83-6; PMID:17805294; http://dx.doi.org/10.1038/nature06130
-
(2007)
Nature
, vol.449
, pp. 83-86
-
-
Lindell, D.1
Jaffe, J.D.2
Coleman, M.L.3
Futschik, M.E.4
Axmann, I.M.5
Rector, T.6
Kettler, G.7
Sullivan, M.B.8
Steen, R.9
Hess, W.R.10
-
75
-
-
79955364234
-
Antisense RNA protects mRNA from RNase E degradation by RNA-RNA duplex formation during phage infection
-
PMID:21325266
-
Stazic D, Lindell D, Steglich C. Antisense RNA protects mRNA from RNase E degradation by RNA-RNA duplex formation during phage infection. Nucleic Acids Res 2011; 39:4890-9; PMID:21325266; http://dx.doi.org/10.1093/nar/gkr037
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 4890-4899
-
-
Stazic, D.1
Lindell, D.2
Steglich, C.3
-
76
-
-
77649179438
-
Mutants of Anabaena sp. PCC 7120 lacking alr1690 and alphafurA antisense RNA show a pleiotropic phenotype and altered photosynthetic machinery
-
PMID:19939500
-
Hernández JA, Alonso I, Pellicer S, Luisa Peleato M, Cases R, Strasser RJ, Barja F, Fillat MF. Mutants of Anabaena sp. PCC 7120 lacking alr1690 and alphafurA antisense RNA show a pleiotropic phenotype and altered photosynthetic machinery. J Plant Physiol 2010; 167:430-7; PMID:19939500; http://dx.doi.org/10.1016/j.jplph.2009.10.009
-
(2010)
J Plant Physiol
, vol.167
, pp. 430-437
-
-
Hernández, J.A.1
Alonso, I.2
Pellicer, S.3
Luisa Peleato, M.4
Cases, R.5
Strasser, R.J.6
Barja, F.7
Fillat, M.F.8
-
77
-
-
28944440488
-
Identification of a furA cis antisense RNA in the cyanobacterium Anabaena sp. PCC 7120
-
PMID:16324715
-
Hernández JA, Muro-Pastor AM, Flores E, Bes MT, Peleato ML, Fillat MF. Identification of a furA cis antisense RNA in the cyanobacterium Anabaena sp. PCC 7120. J Mol Biol 2006; 355:325-34; PMID:16324715; http://dx.doi.org/10. 1016/j.jmb.2005.10.079
-
(2006)
J Mol Biol
, vol.355
, pp. 325-334
-
-
Hernández, J.A.1
Muro-Pastor, A.M.2
Flores, E.3
Bes, M.T.4
Peleato, M.L.5
Fillat, M.F.6
-
78
-
-
80955131872
-
Expression of fur and its antisense ± -fur from Microcystis aeruginosa PCC7806 as response to light and oxidative stress
-
PMID:21940066
-
Martin-Luna B, Sevilla E, Gonzalez A, Bes MT, Fillat MF, Peleato ML. Expression of fur and its antisense ± -fur from Microcystis aeruginosa PCC7806 as response to light and oxidative stress. J Plant Physiol 2011; 168:2244-50; PMID:21940066; http://dx.doi.org/10.1016/j.jplph.2011.08.006
-
(2011)
J Plant Physiol
, vol.168
, pp. 2244-2250
-
-
Martin-Luna, B.1
Sevilla, E.2
Gonzalez, A.3
Bes, M.T.4
Fillat, M.F.5
Peleato, M.L.6
-
79
-
-
79960433506
-
Hfq and its constellation of RNA
-
PMID:21760622
-
Vogel J, Luisi BF. Hfq and its constellation of RNA. Nat Rev Microbiol 2011; 9:578-89; PMID:21760622; http://dx.doi.org/10.1038/nrmicro2615
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
80
-
-
84879014020
-
Cycling of RNAs on Hfq
-
PMID:23466677
-
Wagner EG. Cycling of RNAs on Hfq. RNA Biol 2013; 10:619-26; PMID:23466677; http://dx.doi.org/10.4161/rna.24044
-
(2013)
RNA Biol
, vol.10
, pp. 619-626
-
-
Wagner, E.G.1
-
81
-
-
50849105413
-
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
-
PMID:18725932
-
Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT, Hinton JC, Vogel J. Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet 2008; 4:e1000163; PMID:18725932; http://dx.doi.org/10.1371/journal.pgen.1000163
-
(2008)
PLoS Genet
, vol.4
-
-
Sittka, A.1
Lucchini, S.2
Papenfort, K.3
Sharma, C.M.4
Rolle, K.5
Binnewies, T.T.6
Hinton, J.C.7
Vogel, J.8
-
82
-
-
79958786333
-
Contribution of Hfq to photooxidative stress resistance and global regulation in Rhodobacter sphaeroides
-
PMID:21535243
-
Berghoff BA, Glaeser J, Sharma CM, Zobawa M, Lottspeich F, Vogel J, Klug G. Contribution of Hfq to photooxidative stress resistance and global regulation in Rhodobacter sphaeroides. Mol Microbiol 2011; 80:1479-95; PMID:21535243; http://dx.doi.org/10.1111/j.1365-2958.2011.07658.x
-
(2011)
Mol Microbiol
, vol.80
, pp. 1479-1495
-
-
Berghoff, B.A.1
Glaeser, J.2
Sharma, C.M.3
Zobawa, M.4
Lottspeich, F.5
Vogel, J.6
Klug, G.7
-
83
-
-
77954378224
-
Genomic SELEX for Hfq-binding RNAs identifies genomic aptamers predominantly in antisense transcripts
-
PMID:20348540
-
Lorenz C, Gesell T, Zimmermann B, Schoeberl U, Bilusic I, Rajkowitsch L, Waldsich C, von Haeseler A, Schroeder R. Genomic SELEX for Hfq-binding RNAs identifies genomic aptamers predominantly in antisense transcripts. Nucleic Acids Res 2010; 38:3794-808; PMID:20348540; http://dx.doi.org/10.1093/nar/gkq032
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3794-3808
-
-
Lorenz, C.1
Gesell, T.2
Zimmermann, B.3
Schoeberl, U.4
Bilusic, I.5
Rajkowitsch, L.6
Waldsich, C.7
Von Haeseler, A.8
Schroeder, R.9
-
84
-
-
78649885541
-
RNAs actively cycle on the Sm-like protein Hfq
-
PMID:21123649
-
Fender A, Elf J, Hampel K, Zimmermann B, Wagner EG. RNAs actively cycle on the Sm-like protein Hfq. Genes Dev 2010; 24:2621-6; PMID:21123649; http://dx.doi.org/10.1101/gad.591310
-
(2010)
Genes Dev
, vol.24
, pp. 2621-2626
-
-
Fender, A.1
Elf, J.2
Hampel, K.3
Zimmermann, B.4
Wagner, E.G.5
-
85
-
-
67650649464
-
Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties
-
PMID:19777643
-
Bøggild A, Overgaard M, Valentin-Hansen P, Brodersen DE. Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties. FEBS J 2009; 276:3904-15; PMID:19777643; http://dx.doi.org/10.1111/j.1742-4658.2009.07104.x
-
(2009)
FEBS J
, vol.276
, pp. 3904-3915
-
-
Bøggild, A.1
Overgaard, M.2
Valentin-Hansen, P.3
Brodersen, D.E.4
-
86
-
-
79960413277
-
Hfq is required for optimal nitrate assimilation in the Cyanobacterium Anabaena sp. strain PCC 7120
-
PMID:21602329
-
Puerta-Fernández E, Vioque A. Hfq is required for optimal nitrate assimilation in the Cyanobacterium Anabaena sp. strain PCC 7120. J Bacteriol 2011; 193:3546-55; PMID:21602329; http://dx.doi.org/10.1128/JB.00254-11
-
(2011)
J Bacteriol
, vol.193
, pp. 3546-3555
-
-
Puerta-Fernández, E.1
Vioque, A.2
-
87
-
-
55549101288
-
The cyanobacterial homologue of the RNA chaperone Hfq is essential for motility of the cyanobacterium Synechocystis sp. PCC 6803
-
PMID:18832319
-
Dienst D, Dühring U, Mollenkopf H, Vogel J, Golecki J, Hess WR, Wilde A. The cyanobacterial homologue of the RNA chaperone Hfq is essential for motility of the cyanobacterium Synechocystis sp. PCC 6803. Microbiology 2008; 154:3134-43; PMID:18832319; http://dx.doi.org/10.1099/mic.0.2008/020222-0
-
(2008)
Microbiology
, vol.154
, pp. 3134-3143
-
-
Dienst, D.1
Dühring, U.2
Mollenkopf, H.3
Vogel, J.4
Golecki, J.5
Hess, W.R.6
Wilde, A.7
-
88
-
-
0036230640
-
Screening for the target gene of cyanobacterial cAMP receptor protein SYCRP1
-
PMID:12085767
-
Yoshimura H, Yanagisawa S, Kanehisa M, Ohmori M. Screening for the target gene of cyanobacterial cAMP receptor protein SYCRP1. Mol Microbiol 2002; 43:843-53; PMID:12085767; http://dx.doi.org/10.1046/j.1365-2958.2002.02790.x
-
(2002)
Mol Microbiol
, vol.43
, pp. 843-853
-
-
Yoshimura, H.1
Yanagisawa, S.2
Kanehisa, M.3
Ohmori, M.4
-
89
-
-
24944507588
-
RNase E-based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs
-
PMID:16166379
-
Morita T, Maki K, Aiba H. RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. Genes Dev 2005; 19:2176-86; PMID:16166379; http://dx.doi.org/10.1101/gad.1330405
-
(2005)
Genes Dev
, vol.19
, pp. 2176-2186
-
-
Morita, T.1
Maki, K.2
Aiba, H.3
-
90
-
-
7044285063
-
The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli
-
PMID:15522076
-
Mohanty BK, Maples VF, Kushner SR. The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli. Mol Microbiol 2004; 54:905-20; PMID:15522076; http://dx.doi.org/10.1111/j.1365-2958.2004.04337.x
-
(2004)
Mol Microbiol
, vol.54
, pp. 905-920
-
-
Mohanty, B.K.1
Maples, V.F.2
Kushner, S.R.3
-
91
-
-
13444283630
-
Interaction network containing conserved and essential protein complexes in Escherichia coli
-
PMID:15690043
-
Butland G, Peregrín-Alvarez JM, Li J, Yang W, Yang X, Canadien V, Starostine A, Richards D, Beattie B, Krogan N, et al. Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 2005; 433:531-7; PMID:15690043; http://dx.doi.org/10.1038/nature03239
-
(2005)
Nature
, vol.433
, pp. 531-537
-
-
Butland, G.1
Peregrín-Alvarez, J.M.2
Li, J.3
Yang, W.4
Yang, X.5
Canadien, V.6
Starostine, A.7
Richards, D.8
Beattie, B.9
Krogan, N.10
-
92
-
-
66149130975
-
Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column
-
PMID:19444216
-
Shi Y, Tyson GW, DeLong EF. Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column. Nature 2009; 459:266-9; PMID:19444216; http://dx.doi.org/10.1038/nature08055
-
(2009)
Nature
, vol.459
, pp. 266-269
-
-
Shi, Y.1
Tyson, G.W.2
DeLong, E.F.3
-
93
-
-
84870295523
-
Plastid non-coding RNAs: Emerging candidates for gene regulation
-
PMID:22981395
-
Hotto AM, Germain A, Stern DB. Plastid non-coding RNAs: emerging candidates for gene regulation. Trends Plant Sci 2012; 17:737-44; PMID:22981395; http://dx.doi.org/10.1016/j.tplants.2012.08.002
-
(2012)
Trends Plant Sci
, vol.17
, pp. 737-744
-
-
Hotto, A.M.1
Germain, A.2
Stern, D.B.3
-
94
-
-
84869092510
-
Unexpected Diversity of Chloroplast Noncoding RNAs as Revealed by Deep Sequencing of the Arabidopsis Transcriptome
-
PMID:22384367
-
Hotto AM, Schmitz RJ, Fei Z, Ecker JR, Stern DB. Unexpected Diversity of Chloroplast Noncoding RNAs as Revealed by Deep Sequencing of the Arabidopsis Transcriptome. G3 (Bethesda) 2011; 1:559-70; PMID:22384367; http://dx.doi.org/ 10.1534/g3.111.000752
-
(2011)
G3 (Bethesda)
, vol.1
, pp. 559-570
-
-
Hotto, A.M.1
Schmitz, R.J.2
Fei, Z.3
Ecker, J.R.4
Stern, D.B.5
-
95
-
-
84857757047
-
The primary transcriptome of barley chloroplasts: Numerous noncoding RNAs and the dominating role of the plastid-encoded RNA polymerase
-
PMID:22267485
-
Zhelyazkova P, Sharma CM, Förstner KU, Liere K, Vogel J, Börner T. The primary transcriptome of barley chloroplasts: numerous noncoding RNAs and the dominating role of the plastid-encoded RNA polymerase. Plant Cell 2012; 24:123-36; PMID:22267485; http://dx.doi.org/10.1105/tpc.111.089441
-
(2012)
Plant Cell
, vol.24
, pp. 123-136
-
-
Zhelyazkova, P.1
Sharma, C.M.2
Förstner, K.U.3
Liere, K.4
Vogel, J.5
Börner, T.6
-
96
-
-
0001385989
-
Cytoplasmic synthesis of plastid polypeptides may be controlled by plastid-synthesised RNA
-
Bradbeer JW, Atkinson YE, Börner T, Hagemann R. Cytoplasmic synthesis of plastid polypeptides may be controlled by plastid-synthesised RNA. Nature 1979; 279:816-7; http://dx.doi.org/10.1038/279816a0
-
(1979)
Nature
, vol.279
, pp. 816-817
-
-
Bradbeer, J.W.1
Atkinson, Y.E.2
Börner, T.3
Hagemann, R.4
|