LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq

Genome Research

Volumn 24, Issue 7, 2014, Pages 1169-1179

  Bitton, Danny A ^a,b   Rallis, Charalampos ^a,b   Jeffares, Daniel C ^a,b   Smith, Graeme C ^a,b   Chen, Yuan Y C ^c   Codlin, Sandra ^a,b   Marguerat, Samuel ^d   Bähler, Jürg ^a,b  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

^b UNIVERSITY COLLEGE LONDON   (United Kingdom)

^c DUKE NUS MEDICAL SCHOOL   (Singapore)

^d MRC CLINICAL SCIENCES CENTRE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

INITIATION FACTOR 2ALPHA; MESSENGER RNA; MITOCHONDRIAL RNA; RNA; TRANSCRIPTOME; TRANSFER RNA; FUNGAL RNA; RNA PRECURSOR;

ACCURACY; ALGORITHM; ALTERNATIVE RNA SPLICING; ARTICLE; BIOGENESIS; CELL PROLIFERATION; CONSENSUS SEQUENCE; EXON; EXON SKIPPING; GENE CONTROL; GENE MAPPING; GENE ONTOLOGY; GENE STRUCTURE; HUMAN; HUMAN GENOME; INTRON; LARIAT STRUCTURE; MITOCHONDRIAL GENE; NONHUMAN; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RIBOSOME; RNA SEQUENCE; RNA TRANSLATION; SCHIZOSACCHAROMYCES; SIGNAL NOISE RATIO; TRANSESTERIFICATION; TRANSLATION INITIATION; TURNOVER TIME; WILD TYPE; YEAST CELL; BIOLOGY; CHROMOSOME MAP; GENE DELETION; GENE EXPRESSION PROFILING; GENETIC TRANSCRIPTION; GENETICS; GENOMICS; HIGH THROUGHPUT SEQUENCING; NUCLEIC ACID DATABASE; NUCLEOTIDE MOTIF; NUCLEOTIDE SEQUENCE; POSITION WEIGHT MATRIX; PROCEDURES; REGULATORY SEQUENCE; RNA SPLICING;

ALGORITHMS; BASE SEQUENCE; CHROMOSOME MAPPING; COMPUTATIONAL BIOLOGY; DATABASES, NUCLEIC ACID; EXONS; GENE DELETION; GENE EXPRESSION PROFILING; GENOMICS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; INTRONS; NUCLEOTIDE MOTIFS; POSITION-SPECIFIC SCORING MATRICES; REGULATORY SEQUENCES, NUCLEIC ACID; RNA PRECURSORS; RNA SPLICING; RNA, FUNGAL; SCHIZOSACCHAROMYCES; TRANSCRIPTION, GENETIC; TRANSCRIPTOME;

EID: 84904252830     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.166819.113     Document Type: Article

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