-
1
-
-
0032876602
-
A handful of intron-containing genes produces the lion's share of yeast mRNA
-
Ares, Jr., M., Grate, L., and Pauling, M.H. 1999. A handful of intron-containing genes produces the lion's share of yeast mRNA. RNA 5: 1138-1139.
-
(1999)
RNA
, vol.5
, pp. 1138-1139
-
-
Ares Jr., M.1
Grate, L.2
Pauling, M.H.3
-
2
-
-
0028895417
-
Exon recognition in vertebrate splicing
-
Berget, S.M. 1995. Exon recognition in vertebrate splicing. J. Biol. Chem. 270: 2411-2414.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 2411-2414
-
-
Berget, S.M.1
-
3
-
-
0033991967
-
Isochores and the evolutionary genomics of vertebrates
-
Bernardi, G. 2000. Isochores and the evolutionary genomics of vertebrates. Gene 241: 3-17.
-
(2000)
Gene
, vol.241
, pp. 3-17
-
-
Bernardi, G.1
-
4
-
-
0034161419
-
Exonic splicing enhancers: Mechanism of action, diversity and role in human genetic diseases
-
Blencowe, B.J. 2000. Exonic splicing enhancers: Mechanism of action, diversity and role in human genetic diseases. Trends Biochem. Sci. 25: 106-110.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 106-110
-
-
Blencowe, B.J.1
-
5
-
-
0032991552
-
Characterization of single-nucleotide polymorphisms in coding regions of human genes
-
Cargill, M., Altshuler, D., Ireland, J., Sklar, P., Ardlie, K., Patil, N., Shaw, N., Lane, C.R., Lim, E.P., Kalyanaraman, N., et al. 1999. Characterization of single-nucleotide polymorphisms in coding regions of human genes. Nat. Genet. 22: 231-238.
-
(1999)
Nat. Genet.
, vol.22
, pp. 231-238
-
-
Cargill, M.1
Altshuler, D.2
Ireland, J.3
Sklar, P.4
Ardlie, K.5
Patil, N.6
Shaw, N.7
Lane, C.R.8
Lim, E.P.9
Kalyanaraman, N.10
-
6
-
-
0345035503
-
Intron size and natural selection
-
Carvalho, A.B. and Clark, A.G. 1999. Intron size and natural selection. Nature 401: 344.
-
(1999)
Nature
, vol.401
, pp. 344
-
-
Carvalho, A.B.1
Clark, A.G.2
-
7
-
-
0025906388
-
A generic intron increases gene expression in transgenic mice
-
Choi, T., Huang, M., Gorman, C., and Jaenisch, R. 1991. A generic intron increases gene expression in transgenic mice. Mol. Cell Biol. 11: 3070-3074.
-
(1991)
Mol. Cell Biol.
, vol.11
, pp. 3070-3074
-
-
Choi, T.1
Huang, M.2
Gorman, C.3
Jaenisch, R.4
-
8
-
-
0032429154
-
A DNA polymorphism discovery resource for research on human genetic variation
-
Collins, F.S., Brooks, L.D., and Chakravarti, A. 1998. A DNA polymorphism discovery resource for research on human genetic variation. Genome Res. 8: 1229-1231.
-
(1998)
Genome Res.
, vol.8
, pp. 1229-1231
-
-
Collins, F.S.1
Brooks, L.D.2
Chakravarti, A.3
-
9
-
-
0034076868
-
Nuclear RNA export pathways
-
Cullen, B.R. 2000. Nuclear RNA export pathways. Mol. Cell Biol. 20: 4181-4187.
-
(2000)
Mol. Cell Biol.
, vol.20
, pp. 4181-4187
-
-
Cullen, B.R.1
-
10
-
-
0035953753
-
The highly reduced genome of an enslaved algal nucleus
-
Douglas, S., Zauner, S., Fraunholz, M., Beaton, M., Penny, S., Deng, L.T., Wu, X., Reith, M., Cavalier-Smith, T., and Maier, U.G. 2001. The highly reduced genome of an enslaved algal nucleus. Nature 410: 1091-1096.
-
(2001)
Nature
, vol.410
, pp. 1091-1096
-
-
Douglas, S.1
Zauner, S.2
Fraunholz, M.3
Beaton, M.4
Penny, S.5
Deng, L.T.6
Wu, X.7
Reith, M.8
Cavalier-Smith, T.9
Maier, U.G.10
-
11
-
-
0035230130
-
The splice of life: Alternative splicing and neurological disease
-
Dredge, B.K., Polydorides, A.D., and Darnell, R.B. 2001. The splice of life: Alternative splicing and neurological disease. Nat. Rev. Neurosci. 2: 43-50.
-
(2001)
Nat. Rev. Neurosci.
, vol.2
, pp. 43-50
-
-
Dredge, B.K.1
Polydorides, A.D.2
Darnell, R.B.3
-
12
-
-
0035904279
-
Co-transcriptional splicing of pre-messenger RNAs: Considerations for the mechanism of alternative splicing
-
Goldstrohm, A.C., Greenleaf, A.L., and Garcia-Blanco, M.A. 2001. Co-transcriptional splicing of pre-messenger RNAs: Considerations for the mechanism of alternative splicing. Gene 277: 31-47.
-
(2001)
Gene
, vol.277
, pp. 31-47
-
-
Goldstrohm, A.C.1
Greenleaf, A.L.2
Garcia-Blanco, M.A.3
-
13
-
-
0034906754
-
Alternative RNA splicing in the nervous system
-
Grabowski, P.J. and Black, D.L. 2001. Alternative RNA splicing in the nervous system. Prog. Neurobiol. 65: 289-308.
-
(2001)
Prog. Neurobiol.
, vol.65
, pp. 289-308
-
-
Grabowski, P.J.1
Black, D.L.2
-
14
-
-
0032990407
-
Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis
-
Halushka, M.K., Fan, J.B., Bentley, K., Hsie, L., Shen, N., Weder, A., Cooper, R., Lipshutz, R., and Chakravarti, A. 1999. Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis. Nat. Genet. 22: 239-247.
-
(1999)
Nat. Genet.
, vol.22
, pp. 239-247
-
-
Halushka, M.K.1
Fan, J.B.2
Bentley, K.3
Hsie, L.4
Shen, N.5
Weder, A.6
Cooper, R.7
Lipshutz, R.8
Chakravarti, A.9
-
15
-
-
0034575123
-
Genetic perspectives on human origins and differentiation
-
Harpending, H. and Rogers, A. 2000. Genetic perspectives on human origins and differentiation. Annu. Rev. Genomics Hum. Genet. 1: 361-385.
-
(2000)
Annu. Rev. Genomics Hum. Genet.
, vol.1
, pp. 361-385
-
-
Harpending, H.1
Rogers, A.2
-
16
-
-
0032567081
-
Dissecting the regulatory circuitry of a eukaryotic genome
-
Holstege, F.C., Jennings, E.G., Wyrick, J.J., Lee, T.I., Hengartner, C.J., Green, M.R., Golub, T.R., Lander, E.S., and Young, R.A. 1998. Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95: 717-728.
-
(1998)
Cell
, vol.95
, pp. 717-728
-
-
Holstege, F.C.1
Jennings, E.G.2
Wyrick, J.J.3
Lee, T.I.4
Hengartner, C.J.5
Green, M.R.6
Golub, T.R.7
Lander, E.S.8
Young, R.A.9
-
17
-
-
0035936144
-
Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi
-
Katinka, M.D., Duprat, S., Cornillot, E., Metenier, G., Thomarat, F., Prensier, G., Barbe, V., Peyretaillade, E., Brottier, P., Wincker, P., et al. 2001. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature 414: 450-453.
-
(2001)
Nature
, vol.414
, pp. 450-453
-
-
Katinka, M.D.1
Duprat, S.2
Cornillot, E.3
Metenier, G.4
Thomarat, F.5
Prensier, G.6
Barbe, V.7
Peyretaillade, E.8
Brottier, P.9
Wincker, P.10
-
18
-
-
0034663604
-
Analysis of the splicing machinery in fission yeast: A comparison with budding yeast and mammals
-
Kaufer, N.F. and Potashkin, J. 2000. Analysis of the splicing machinery in fission yeast: A comparison with budding yeast and mammals. Nucleic Acids Res. 28: 3003-3010.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3003-3010
-
-
Kaufer, N.F.1
Potashkin, J.2
-
20
-
-
0035949674
-
A computational analysis of sequence features involved in recognition of short introns
-
Lim, L.P. and Burge, C.B. 2001. A computational analysis of sequence features involved in recognition of short introns. Proc. Natl. Acad. Sci. 98: 11193-11198.
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 11193-11198
-
-
Lim, L.P.1
Burge, C.B.2
-
21
-
-
0037062440
-
Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection
-
Llopart, A., Comeron, J.M., Brunet, F.G., Lachaise, D., and Long, M. 2002. Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection. Proc. Natl. Acad. Sci. 99: 8121-8126.
-
(2002)
Proc. Natl. Acad. Sci.
, vol.99
, pp. 8121-8126
-
-
Llopart, A.1
Comeron, J.M.2
Brunet, F.G.3
Lachaise, D.4
Long, M.5
-
22
-
-
0033592896
-
Splicing is required for rapid and efficient mRNA export in metazoans
-
Luo, M.J. and Reed, R. 1999. Splicing is required for rapid and efficient mRNA export in metazoans. Proc. Natl. Acad. Sci. 96: 14937-14942.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 14937-14942
-
-
Luo, M.J.1
Reed, R.2
-
23
-
-
0034461083
-
An intronic splicing enhancer binds U1 snRNPs to enhance splicing and select 5′ splice sites
-
McCullough, A.J. and Berget, S.M. 2000. An intronic splicing enhancer binds U1 snRNPs to enhance splicing and select 5′ splice sites. Mol. Cell Biol. 20: 9225-9235.
-
(2000)
Mol. Cell Biol.
, vol.20
, pp. 9225-9235
-
-
McCullough, A.J.1
Berget, S.M.2
-
24
-
-
17344380534
-
An SNP map of human chromosome 22
-
Mullikin, J.C., Hunt, S.E., Cole, C.G., Mortimore, B.J., Rice, C.M., Burton, J., Matthews, L.H., Pavitt, R., Plumb, R.W., Sims, S.K., et al. 2000. An SNP map of human chromosome 22. Nature 407: 516-520.
-
(2000)
Nature
, vol.407
, pp. 516-520
-
-
Mullikin, J.C.1
Hunt, S.E.2
Cole, C.G.3
Mortimore, B.J.4
Rice, C.M.5
Burton, J.6
Matthews, L.H.7
Pavitt, R.8
Plumb, R.W.9
Sims, S.K.10
-
25
-
-
0036498543
-
Splicing regulation as a potential genetic modifier
-
Nissim-Rafinia, M. and Kerem, B. 2002. Splicing regulation as a potential genetic modifier. Trends Genet. 18: 123-127.
-
(2002)
Trends Genet.
, vol.18
, pp. 123-127
-
-
Nissim-Rafinia, M.1
Kerem, B.2
-
26
-
-
0031593238
-
Patterns and rates of indel evolution in processed pseudogenes from humans and murids
-
Ophir, R. and Graur, D. 1997. Patterns and rates of indel evolution in processed pseudogenes from humans and murids. Gene 205: 191-202.
-
(1997)
Gene
, vol.205
, pp. 191-202
-
-
Ophir, R.1
Graur, D.2
-
27
-
-
0025966661
-
Heterologous introns can enhance expression of transgenes in mice
-
Palmiter, R.D., Sandgren, E.P., Avarbock, M.R., Allen, D.D., and Brinster, R.L. 1991. Heterologous introns can enhance expression of transgenes in mice. Proc. Natl. Acad. Sci. 88: 478-482.
-
(1991)
Proc. Natl. Acad. Sci.
, vol.88
, pp. 478-482
-
-
Palmiter, R.D.1
Sandgren, E.P.2
Avarbock, M.R.3
Allen, D.D.4
Brinster, R.L.5
-
28
-
-
0035058360
-
Evolution of genome size: New approaches to an old problem
-
Petrov, D.A. 2001. Evolution of genome size: new approaches to an old problem, Trends Genet. 17: 23-28.
-
(2001)
Trends Genet.
, vol.17
, pp. 23-28
-
-
Petrov, D.A.1
-
29
-
-
0035865322
-
A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms
-
Sachidanandam, R., Weissman, D., Schmidt, S.C., Kakol, J.M., Stein, L.D., Marth, G., Sherry, S., Mullikin, J.C., Mortimore, B.J., Willey, D.L., et al. 2001. A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms. Nature 409: 928-933.
-
(2001)
Nature
, vol.409
, pp. 928-933
-
-
Sachidanandam, R.1
Weissman, D.2
Schmidt, S.C.3
Kakol, J.M.4
Stein, L.D.5
Marth, G.6
Sherry, S.7
Mullikin, J.C.8
Mortimore, B.J.9
Willey, D.L.10
-
30
-
-
0033034668
-
Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae
-
Spingola, M., Grate, L., Haussler, D., and Ares, Jr., M.. 1999. Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae. RNA 5: 221-234.
-
(1999)
RNA
, vol.5
, pp. 221-234
-
-
Spingola, M.1
Grate, L.2
Haussler, D.3
Ares Jr., M.4
-
31
-
-
0021704598
-
A minimal intron length but no specific internal sequence is required for splicing the large rabbit β-globin intron
-
Wieringa, B., Hofer, E., and Weissmann, C. 1984. A minimal intron length but no specific internal sequence is required for splicing the large rabbit β-globin intron. Cell 37: 915-925.
-
(1984)
Cell
, vol.37
, pp. 915-925
-
-
Wieringa, B.1
Hofer, E.2
Weissmann, C.3
-
32
-
-
0033623575
-
Is "junk" DNA mostly intron DNA?
-
Wong, G.K.S., Passey, D.A., Huang, Y.Z., Yang, Z., and Yu, J. 2000. Is "junk" DNA mostly intron DNA? Genome Res. 10: 1672-1678.
-
(2000)
Genome Res.
, vol.10
, pp. 1672-1678
-
-
Wong, G.K.S.1
Passey, D.A.2
Huang, Y.Z.3
Yang, Z.4
Yu, J.5
-
33
-
-
0035214768
-
Most of the human genome is transcribed
-
Wong, G.K.S., Passey, D.A., and Yu, J. 2001. Most of the human genome is transcribed. Genome Res. 11: 1975-1977.
-
(2001)
Genome Res.
, vol.11
, pp. 1975-1977
-
-
Wong, G.K.S.1
Passey, D.A.2
Yu, J.3
-
34
-
-
0037148758
-
The genome sequence of Schizosaccharomyces pombe
-
Wood, V., Gwilliam, R., Rajandream, M.A., Lyne, M., Lyne, R., Stewart, A., Sgouros, J., Peat, N., Hayles, J., Baker, S., et al. 2002. The genome sequence of Schizosaccharomyces pombe. Nature 415: 871-880.
-
(2002)
Nature
, vol.415
, pp. 871-880
-
-
Wood, V.1
Gwilliam, R.2
Rajandream, M.A.3
Lyne, M.4
Lyne, R.5
Stewart, A.6
Sgouros, J.7
Peat, N.8
Hayles, J.9
Baker, S.10
-
35
-
-
0034699472
-
The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans
-
Zhou, Z., Luo, M.J., Strasser, K., Katahira, J., Hurt, E., and Reed, R. 2000. The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans. Nature 407: 401-405.
-
(2000)
Nature
, vol.407
, pp. 401-405
-
-
Zhou, Z.1
Luo, M.J.2
Strasser, K.3
Katahira, J.4
Hurt, E.5
Reed, R.6
-
36
-
-
24644524459
-
-
The RepeatMasker program is available at this site
-
http://ftp.genome.washington.edu/RM/RepeatMasker.html; The RepeatMasker program is available at this site.
-
-
-
-
37
-
-
24644460904
-
-
Data from the Environmental Genome Project
-
http://www.genome.washington.edu/projects/egpsnps; Data from the Environmental Genome Project.
-
-
-
|