An Integrated SNP Mining and Utilization (ISMU) pipeline for next generation sequencing data

PLoS ONE

Volumn 9, Issue 7, 2014, Pages

  Azam, Sarwar ^a   Rathore, Abhishek ^a   Shah, Trushar M ^a   Telluri, Mohan ^a   Amindala, BhanuPrakash ^a   Ruperao, Pradeep ^a,b   Katta, Mohan A V S K ^a   Varshney, Rajeev K ^a  

^a INTERNATIONAL CROPS RESEARCH INSTITUTE FOR THE SEMI ARID TROPICS ICRISAT   (India)

^b UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPARATIVE STUDY; COMPUTER INTERFACE; COMPUTER PROGRAM; CONTROLLED STUDY; DATA IMPORTING; DATA MINING; DATA PREPROCESSING; DATA PROCESSING; DNA SEQUENCE; GENE FREQUENCY; GENE MAPPING; GENE SEQUENCE; GENETIC DATABASE; GENETIC LINKAGE; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HETEROZYGOSITY; INFORMATION; INTEGRATED SINGLE NUCLEOTIDE POLYMORPHISM MINING AND UTILIZATION PIPELINE; NEXT GENERATION SEQUENCING; NONHUMAN; PLANT BREEDING; PLANT GENETICS; POLYMORPHISM INFORMATION CONTENT VALUE; QUALITY CONTROL; SEQUENCE ALIGNMENT; SINGLE NUCLEOTIDE POLYMORPHISM; WORKFLOW; BIOLOGY; BREEDING; GENETICS; GENOMICS; HIGH THROUGHPUT SEQUENCING; INTERNET; PLANT; PLANT GENOME; PROCEDURES;

BREEDING; COMPUTATIONAL BIOLOGY; DATA MINING; GENOME, PLANT; GENOMICS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; INTERNET; PLANTS; POLYMORPHISM, SINGLE NUCLEOTIDE; SOFTWARE;

EID: 84903887637     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0101754     Document Type: Article

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