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Volumn 17, Issue 5, 2014, Pages 458-472

Topomer CoMFA and virtual screening studies of azaindole class renin inhibitors

Author keywords

Fragment based drug design; Renin inhibitors; Surflex dock; Topomer Comfa; Topomer search; Virtual screening

Indexed keywords

AMIDE; AZAINDOLE CARBOXAMIDE; INDOLE DERIVATIVE; RENIN INHIBITOR; UNCLASSIFIED DRUG; 4-AZAINDOLE; ANTIHYPERTENSIVE AGENT; RENIN;

EID: 84903748354     PISSN: 13862073     EISSN: 18755402     Source Type: Journal    
DOI: 10.2174/1386207317666140107094708     Document Type: Article
Times cited : (20)

References (44)
  • 1
    • 80355131957 scopus 로고    scopus 로고
    • Reducing cardiorenal risk through combination therapy with a direct renin inhibitor
    • Rastogi, A.; Rashid, M.; Wright, R.F. Reducing cardiorenal risk through combination therapy with a direct renin inhibitor. J. Clin. Hypertens. (Greenwich), 2011, 13, 848-855.
    • (2011) J. Clin. Hypertens. (Greenwich) , vol.13 , pp. 848-855
    • Rastogi, A.1    Rashid, M.2    Wright, R.F.3
  • 3
    • 84871713350 scopus 로고    scopus 로고
    • Computational modeling and design of rennin inhibitors
    • Subramanian, G. Computational modeling and design of rennin inhibitors. Bioorg. Med. Chem. Lett., 2013, 23, 460-465.
    • (2013) Bioorg. Med. Chem. Lett. , vol.23 , pp. 460-465
    • Subramanian, G.1
  • 4
    • 78149259520 scopus 로고    scopus 로고
    • Direct rennin inhibitors as a new therapy for hypertension
    • Webb, R.L.; Schiering, N.; Sedrani, R.; Maibaum, J. Direct rennin inhibitors as a new therapy for hypertension. J. Med. Chem., 2010, 53, 7490-7520.
    • (2010) J. Med. Chem. , vol.53 , pp. 7490-7520
    • Webb, R.L.1    Schiering, N.2    Sedrani, R.3    Maibaum, J.4
  • 5
    • 84879385976 scopus 로고    scopus 로고
    • Inhibition of the renin-angiotensin system for lowering coronary artery disease risk
    • Sheppard, R.J.; Schiffrin, E.L. Inhibition of the renin-angiotensin system for lowering coronary artery disease risk. Curr. Opin. Pharmacol., 2013, 13, 274-279.
    • (2013) Curr. Opin. Pharmacol. , vol.13 , pp. 274-279
    • Sheppard, R.J.1    Schiffrin, E.L.2
  • 6
    • 79251628080 scopus 로고    scopus 로고
    • Dual blockade of the renin-angiotensin system with angiotensin converting enzyme (ACE) inhibitors and angiotensin receptor blockers (ARBs)
    • Ritter, J.M. Dual blockade of the renin-angiotensin system with angiotensin converting enzyme (ACE) inhibitors and angiotensin receptor blockers (ARBs). Br. J. Clin. Pharmacol., 2011, 71, 313-315.
    • (2011) Br. J. Clin. Pharmacol. , vol.71 , pp. 313-315
    • Ritter, J.M.1
  • 7
    • 45149113838 scopus 로고    scopus 로고
    • Aliskiren: Renin inhibitor for hypertension management
    • DOI 10.1016/j.clinthera.2008.01.011, PII S0149291808000593
    • Cheng, J.W.M. Aliskiren: Renin inhibitor for hypertension management. Clin. Ther., 2008, 30, 31-47
    • (2008) Clinical Therapeutics , vol.30 , Issue.1 , pp. 31-47
    • Cheng, J.W.M.1
  • 8
    • 84861547441 scopus 로고    scopus 로고
    • How well do aliskiren's purported mechanisms track its effects on cardiovascular and renal disorders?
    • Jagadeesh, G.; Balakumar, P.; Stockbridge, N. How well do aliskiren's purported mechanisms track its effects on cardiovascular and renal disorders? Cell Signal, 2012, 24, 1583-1591.
    • (2012) Cell Signal , vol.24 , pp. 1583-1591
    • Jagadeesh, G.1    Balakumar, P.2    Stockbridge, N.3
  • 15
    • 77957875612 scopus 로고    scopus 로고
    • Discovery and optimization of a new class of potent and non-chiral indole-3-carboxamide-based rennin inhibitors
    • Scheiper, B.; Matter, H.; Steinhagen, H.; Stilz, U.; Böcskei, Z.; Fleury, V.; McCort, G. Discovery and optimization of a new class of potent and non-chiral indole-3-carboxamide-based rennin inhibitors. Bioorg. Med. Chem. Lett., 2010, 20, 6268-6272.
    • (2010) Bioorg. Med. Chem. Lett. , vol.20 , pp. 6268-6272
    • Scheiper, B.1    Matter, H.2    Steinhagen, H.3    Stilz, U.4    Böcskei, Z.5    Fleury, V.6    McCort, G.7
  • 17
    • 81155159748 scopus 로고    scopus 로고
    • Structure-based design and optimization of potent rennin inhibitors on 5-or 7-azaindole-scaffolds
    • Matter, H.; Scheiper, B.; Steinhagen, H.; Böcskei, Z.; Fleury, V.; McCort, G. Structure-based design and optimization of potent rennin inhibitors on 5-or 7-azaindole-scaffolds. Bioorg. Med. Chem. Lett., 2011, 21, 5487-5492.
    • (2011) Bioorg. Med. Chem. Lett. , vol.21 , pp. 5487-5492
    • Matter, H.1    Scheiper, B.2    Steinhagen, H.3    Böcskei, Z.4    Fleury, V.5    McCort, G.6
  • 18
    • 84855794457 scopus 로고    scopus 로고
    • An integrated computational workflow for efficient and quantitative modeling of renin inhibitors
    • Subramanian, G.; Rao, S.N. An integrated computational workflow for efficient and quantitative modeling of renin inhibitors. Bioorg. Med. Chem., 2012, 20, 851-858.
    • (2012) Bioorg. Med. Chem. , vol.20 , pp. 851-858
    • Subramanian, G.1    Rao, S.N.2
  • 19
    • 43049096782 scopus 로고    scopus 로고
    • Similarity searching and scaffold hopping in synthetically accessible combinatorial chemistry spaces
    • Boehm, M.; Wu, T.Y.; Claussen, H.; Lemmen, C. Similarity searching and scaffold hopping in synthetically accessible combinatorial chemistry spaces. J. Med. Chem., 2008, 51, 2468-2480.
    • (2008) J. Med. Chem. , vol.51 , pp. 2468-2480
    • Boehm, M.1    Wu, T.Y.2    Claussen, H.3    Lemmen, C.4
  • 20
    • 57649100158 scopus 로고    scopus 로고
    • Virtual screening for R-groups, including predicted pIC50 contributions, within large structural databases, using Topomer CoMFA
    • Cramer, R.D.; Cruz, P.; Stahl, G.; Curtiss, W.C.; Campbell, B.; Masek, B.B.; Soltanshahi, F. Virtual screening for R-groups, including predicted pIC50 contributions, within large structural databases, using Topomer CoMFA. J. Chem. Inf. Model., 2008, 48, 2180-2195.
    • (2008) J. Chem. Inf. Model. , vol.48 , pp. 2180-2195
    • Cramer, R.D.1    Cruz, P.2    Stahl, G.3    Curtiss, W.C.4    Campbell, B.5    Masek, B.B.6    Soltanshahi, F.7
  • 21
    • 84876079596 scopus 로고    scopus 로고
    • Fragment informatics and computational fragment-based drug design: An Overview and update
    • Sheng, C.Q.; Zhang, W.N. Fragment Informatics and Computational Fragment-Based Drug Design: An Overview and Update. Med. Res. Rev., 2013, 33, 554-598.
    • (2013) Med. Res. Rev. , vol.33 , pp. 554-598
    • Sheng, C.Q.1    Zhang, W.N.2
  • 22
    • 84876557057 scopus 로고    scopus 로고
    • In silico fragment-based drug discovery: Setup and validation of a fragment-to-lead computational protocol using S4MPLE
    • Hoffer, L.; Renaud, J.P.; Horvath, D. In Silico Fragment-Based Drug Discovery: Setup and Validation of a Fragment-to-Lead Computational Protocol Using S4MPLE. J. Chem. Inf. Model, 2013, 53, 836-851.
    • (2013) J. Chem. Inf. Model , vol.53 , pp. 836-851
    • Hoffer, L.1    Renaud, J.P.2    Horvath, D.3
  • 23
    • 65249092596 scopus 로고    scopus 로고
    • Similarity-based classifier using topomers to provide a knowledge base for hERG channel inhibition
    • Nisius, B.; Göller, A.H. Similarity-based classifier using topomers to provide a knowledge base for hERG channel inhibition. J. Chem. Inf. Model, 2009, 49, 247-256.
    • (2009) J. Chem. Inf. Model , vol.49 , pp. 247-256
    • Nisius, B.1    Göller, A.H.2
  • 24
    • 67650395306 scopus 로고    scopus 로고
    • Application of 3D QSAR CoMFA/CoMSIA and in silico docking studies on novel renin inhibitors against cardiovascular diseases
    • Politi, A.; Durdagi, S.; Moutevelis-Minakakis, P.; Kokotos, G.; Papadopoulos, M.G.; Mavromoustakos, T. Application of 3D QSAR CoMFA/CoMSIA and in silico docking studies on novel renin inhibitors against cardiovascular diseases. Eur. J. Med. Chem., 2009, 44, 3703-3711.
    • (2009) Eur. J. Med. Chem. , vol.44 , pp. 3703-3711
    • Politi, A.1    Durdagi, S.2    Moutevelis-Minakakis, P.3    Kokotos, G.4    Papadopoulos, M.G.5    Mavromoustakos, T.6
  • 26
    • 84903722625 scopus 로고    scopus 로고
    • SYBYL version X1.2, St. Louis, MO, USA: Tripos Inc.
    • SYBYL version X1.2, St. Louis, MO, USA: Tripos Inc.
  • 27
    • 84862828898 scopus 로고    scopus 로고
    • Pharmacophore and QSAR studies to design novel histone deacetylase 2 inhibitors
    • Xiang, Y.H.; Hou, Z.Y.; Zhang, Z.Y. Pharmacophore and QSAR Studies to Design Novel Histone Deacetylase 2 Inhibitors. Chem. Biol. Drug Des., 2012, 79, 760-770.
    • (2012) Chem. Biol. Drug Des. , vol.79 , pp. 760-770
    • Xiang, Y.H.1    Hou, Z.Y.2    Zhang, Z.Y.3
  • 28
    • 84903701426 scopus 로고    scopus 로고
    • Topomer CoMFA® Manual SYBYL Version X1.2 1699 South Hanley Rd St. Louis MO 63144 USA: Tripos Inc SD.
    • Topomer CoMFA® Manual, SYBYL, version X1.2, 1699 South Hanley Rd, St. Louis, MO 63144, USA: Tripos Inc, SD.
  • 29
    • 79953209388 scopus 로고    scopus 로고
    • Molecular dynamics simulation, free energy calculation and structure-based 3D-QSAR studies of B-RAF kinase inhibitors
    • Yang, Y.; Qin, J.; Liu, H.X.; Yao, X.J. Molecular dynamics simulation, free energy calculation and structure-based 3D-QSAR studies of B-RAF kinase inhibitors. J. Chem. Inf. Model., 2011, 51, 680-692.
    • (2011) J. Chem. Inf. Model. , vol.51 , pp. 680-692
    • Yang, Y.1    Qin, J.2    Liu, H.X.3    Yao, X.J.4
  • 30
    • 84875844492 scopus 로고    scopus 로고
    • Binding conformations, QSAR, and molecular design of Alkene-3- quinolinecarbonitriles as Src inhibitors
    • Zeng, G.H.; Fang, D.Q.; Wu, W.J.; Zhang, R.; Xie, W.G.; Wu, J.H.; Shen, Y. Binding conformations, QSAR, and molecular design of Alkene-3- quinolinecarbonitriles as Src inhibitors. Int. J. Quantum. Chem., 2013, 113, 1467-1478.
    • (2013) Int. J. Quantum. Chem. , vol.113 , pp. 1467-1478
    • Zeng, G.H.1    Fang, D.Q.2    Wu, W.J.3    Zhang, R.4    Xie, W.G.5    Wu, J.H.6    Shen, Y.7
  • 31
    • 84878004695 scopus 로고    scopus 로고
    • Combined 3D-QSAR modeling and molecular docking study on azacycles CCR5 antagonists
    • Ji, Y.J.; Shu, M.; Lin, Y.; Wang, Y.Q.; Wang, R.; Hu, Y.; Lin, Z.H. Combined 3D-QSAR modeling and molecular docking study on azacycles CCR5 antagonists. J. Mol. Struct., 2013, 1045, 35-41.
    • (2013) J. Mol. Struct. , vol.1045 , pp. 35-41
    • Ji, Y.J.1    Shu, M.2    Lin, Y.3    Wang, Y.Q.4    Wang, R.5    Hu, Y.6    Lin, Z.H.7
  • 32
    • 84874929328 scopus 로고    scopus 로고
    • 3D-QSAR studies of azaoxoisoaporphine, oxoaporphine, and oxoisoaporphine derivatives as anti-AChE and anti-AD agents by the CoMFA method
    • Li, Y.P.; Weng, X.; Ning, F.X.; Ou, J.B.; Hou, J.Q.; Luo, H.B.; Li, D.; Huang, Z.S.; Huang, S.L.; Gu, L.Q. 3D-QSAR studies of azaoxoisoaporphine, oxoaporphine, and oxoisoaporphine derivatives as anti-AChE and anti-AD agents by the CoMFA method. J. Mol. Graph. Model, 2013, 41, 61-67.
    • (2013) J. Mol. Graph. Model , vol.41 , pp. 61-67
    • Li, Y.P.1    Weng, X.2    Ning, F.X.3    Ou, J.B.4    Hou, J.Q.5    Luo, H.B.6    Li, D.7    Huang, Z.S.8    Huang, S.L.9    Gu, L.Q.10
  • 33
    • 79751538511 scopus 로고    scopus 로고
    • Studies of tricyclic piperazine/piperidine furnished molecules as novel integrin αvβ3/αIIbß3 dual antagonists using 3D-QSAR and molecular docking
    • Yan, Y.L.; Li, Y.; Zhang, S.W.; Ai, C.Z. Studies of tricyclic piperazine/piperidine furnished molecules as novel integrin αvβ3/ αIIbß3 dual antagonists using 3D-QSAR and molecular docking. J. Mol. Graph. Model, 2011, 29, 747-762.
    • (2011) J. Mol. Graph. Model , vol.29 , pp. 747-762
    • Yan, Y.L.1    Li, Y.2    Zhang, S.W.3    Ai, C.Z.4
  • 35
    • 79960605693 scopus 로고    scopus 로고
    • Identification of nonpeptide oxytocin receptor ligands by receptor-ligand fingerprint similarity search
    • Weill, N.; Valencia, C.; Gioria, S.; Villa, P.; Hibert, M.; Rognan, D. Identification of Nonpeptide Oxytocin Receptor Ligands by Receptor-Ligand Fingerprint Similarity Search. Mol. Inform., 2011, 30, 521-526.
    • (2011) Mol. Inform. , vol.30 , pp. 521-526
    • Weill, N.1    Valencia, C.2    Gioria, S.3    Villa, P.4    Hibert, M.5    Rognan, D.6
  • 36
    • 84903742047 scopus 로고    scopus 로고
    • Available at:
    • Available at: http://www.rcsb.org/pdb/.
  • 37
    • 80052641803 scopus 로고    scopus 로고
    • Molecular docking, 3D-QSAR studies, and in silico ADME prediction of p-aminosalicylic acid derivatives as neuraminidase inhibitors
    • Zhang, J.; Shan, Y.Y.; Pan, X.Y.; Wang, C.; Xu, W.F.; He, L.C. Molecular docking, 3D-QSAR studies, and in silico ADME prediction of p-aminosalicylic acid derivatives as neuraminidase inhibitors. Chem. Biol. Drug Des., 2011, 78, 709-717.
    • (2011) Chem. Biol. Drug Des. , vol.78 , pp. 709-717
    • Zhang, J.1    Shan, Y.Y.2    Pan, X.Y.3    Wang, C.4    Xu, W.F.5    He, L.C.6
  • 38
    • 84878691323 scopus 로고    scopus 로고
    • Docking-based three-dimensional quantitative structure-activity relationship (3D-QSAR) predicts binding affinities to aryl hydrocarbon receptor for polychlorinated dibenzodioxins, dibenzofurans, and biphenyls
    • Yuan, J.T.; Pu, Y.P.; Yin, L.H. Docking-based three-dimensional quantitative structure-activity relationship (3D-QSAR) predicts binding affinities to aryl hydrocarbon receptor for polychlorinated dibenzodioxins, dibenzofurans, and biphenyls. Environ. Toxicol. Chem., 2013, 32, 1453-1458.
    • (2013) Environ. Toxicol. Chem. , vol.32 , pp. 1453-1458
    • Yuan, J.T.1    Pu, Y.P.2    Yin, L.H.3
  • 39
    • 34247343346 scopus 로고    scopus 로고
    • Surflex-Dock 2.1: Robust performance from ligand energetic modeling, ring flexibility, and knowledge-based search
    • DOI 10.1007/s10822-007-9114-2
    • Jain, A.N. Surflex-Dock 2.1: Robust performance from ligand energetic modeling, ring flexibility, and knowledge-based search. J. Comput. Aid Mol. Des., 2007, 21, 281-306
    • (2007) Journal of Computer-Aided Molecular Design , vol.21 , Issue.5 , pp. 281-306
    • Jain, A.N.1
  • 40
    • 84874930367 scopus 로고    scopus 로고
    • Pharmacophore modeling, virtual screening, docking and in silico ADMET analysis of protein kinase B (PKB β) inhibitors
    • Vyas, V.K.; Ghate, M.; Goel, A. Pharmacophore modeling, virtual screening, docking and in silico ADMET analysis of protein kinase B (PKB β) inhibitors. J. Mol. Graph. Model, 2013, 42, 17-25.
    • (2013) J. Mol. Graph. Model , vol.42 , pp. 17-25
    • Vyas, V.K.1    Ghate, M.2    Goel, A.3
  • 41
    • 84903714682 scopus 로고    scopus 로고
    • Docking Suite Manual, SYBYL, version X1.2, 1699 South Hanley Rd, St. Louis, MO 63144, USA: Tripos Inc, SD.
    • Docking Suite Manual, SYBYL, version X1.2, 1699 South Hanley Rd, St. Louis, MO 63144, USA: Tripos Inc, SD.
  • 42
    • 38349000957 scopus 로고    scopus 로고
    • Insights into the structural requirements of farnesyltransferase inhibitors as potential anti-tumor agents based on 3D-QSAR CoMFA and CoMSIA models
    • Puntambekar, D.S.; Giridhar, R.; Yadav, M.R. Insights into the structural requirements of farnesyltransferase inhibitors as potential anti-tumor agents based on 3D-QSAR CoMFA and CoMSIA models. Eur. J. Med. Chem., 2008, 43, 142-154.
    • (2008) Eur. J. Med. Chem. , vol.43 , pp. 142-154
    • Puntambekar, D.S.1    Giridhar, R.2    Yadav, M.R.3
  • 43
    • 33750512720 scopus 로고    scopus 로고
    • Understanding the antitumor activity of novel tricyclicpiperazinyl derivatives as farnesyltransferase inhibitors using CoMFA and CoMSIA
    • DOI 10.1016/j.ejmech.2006.07.002, PII S0223523406002303
    • Puntambekar, D.S.; Giridhar, R.; Yadav, M.R. Understanding the antitumor activity of novel tricyclicpiperazinyl derivatives as farnesyltransferase inhibitors using CoMFA and CoMSIA. Eur. J. Med. Chem., 2006, 41, 1279-1292
    • (2006) European Journal of Medicinal Chemistry , vol.41 , Issue.11 , pp. 1279-1292
    • Puntambekar, D.S.1    Giridhar, R.2    Yadav, M.R.3
  • 44
    • 84874190175 scopus 로고    scopus 로고
    • QSAR docking and ADMET studies of camptothecin derivatives as inhibitors of DNA topoisomerase-I
    • Yadav, D.K.; Khan, F. QSAR, docking and ADMET studies of camptothecin derivatives as inhibitors of DNA topoisomerase-I. J. Chemom., 2013, 27, 21-33.
    • (2013) J. Chemom. , vol.27 , pp. 21-33
    • Yadav, D.K.1    Khan, F.2


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