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Volumn 10, Issue 6, 2014, Pages

Limits of Feedback Control in Bacterial Chemotaxis

Author keywords

[No Author keywords available]

Indexed keywords

ACTUATORS; BIOCHEMISTRY; ROBUST CONTROL;

EID: 84903388915     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1003694     Document Type: Article
Times cited : (78)

References (46)
  • 1
    • 0015526205 scopus 로고
    • Chemotaxis in Escherichia coli analysed by three-dimensional tracking
    • Berg HC, Brown DA, (1972) Chemotaxis in Escherichia coli analysed by three-dimensional tracking. Nature 239: 500-504.
    • (1972) Nature , vol.239 , pp. 500-504
    • Berg, H.C.1    Brown, D.A.2
  • 2
    • 84856402575 scopus 로고    scopus 로고
    • Stochastic coordination of multiple actuators reduces latency and improves chemotactic response in bacteria
    • Sneddon MW, Pontius W, Emonet T, (2012) Stochastic coordination of multiple actuators reduces latency and improves chemotactic response in bacteria. Proc Natl Acad Sci U S A 109: 805-810.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 805-810
    • Sneddon, M.W.1    Pontius, W.2    Emonet, T.3
  • 3
    • 70350721636 scopus 로고    scopus 로고
    • High-resolution, long-term characterization of bacterial motility using optical tweezers
    • Min TL, Mears PJ, Chubiz LM, Rao CV, Golding I, et al. (2009) High-resolution, long-term characterization of bacterial motility using optical tweezers. Nat Methods 6: 831-835.
    • (2009) Nat Methods , vol.6 , pp. 831-835
    • Min, T.L.1    Mears, P.J.2    Chubiz, L.M.3    Rao, C.V.4    Golding, I.5
  • 4
    • 84861836686 scopus 로고    scopus 로고
    • Responding to chemical gradients: bacterial chemotaxis
    • Sourjik V, Wingreen NS, (2012) Responding to chemical gradients: bacterial chemotaxis. Current opinion in cell biology 24: 262-268.
    • (2012) Current Opinion in Cell Biology , vol.24 , pp. 262-268
    • Sourjik, V.1    Wingreen, N.S.2
  • 5
    • 0032492852 scopus 로고    scopus 로고
    • Receptor clustering as a cellular mechanism to control sensitivity
    • Bray D, Levin MD, Morton-Firth CJ, (1998) Receptor clustering as a cellular mechanism to control sensitivity. Nature 393: 85-88.
    • (1998) Nature , vol.393 , pp. 85-88
    • Bray, D.1    Levin, M.D.2    Morton-Firth, C.J.3
  • 6
    • 1842473065 scopus 로고    scopus 로고
    • Functional interactions between receptors in bacterial chemotaxis
    • Sourjik V, Berg HC, (2004) Functional interactions between receptors in bacterial chemotaxis. Nature 428: 437-441.
    • (2004) Nature , vol.428 , pp. 437-441
    • Sourjik, V.1    Berg, H.C.2
  • 7
    • 78751698851 scopus 로고    scopus 로고
    • Chemotaxis kinase CheA is activated by three neighbouring chemoreceptor dimers as effectively as by receptor clusters
    • Li M, Khursigara CM, Subramaniam S, Hazelbauer GL, (2011) Chemotaxis kinase CheA is activated by three neighbouring chemoreceptor dimers as effectively as by receptor clusters. Mol Microbiol 79: 677-685.
    • (2011) Mol Microbiol , vol.79 , pp. 677-685
    • Li, M.1    Khursigara, C.M.2    Subramaniam, S.3    Hazelbauer, G.L.4
  • 9
    • 0020627869 scopus 로고
    • Adaptation kinetics in bacterial chemotaxis
    • Block SM, Segall JE, Berg HC, (1983) Adaptation kinetics in bacterial chemotaxis. J Bacteriol 154: 312-323.
    • (1983) J Bacteriol , vol.154 , pp. 312-323
    • Block, S.M.1    Segall, J.E.2    Berg, H.C.3
  • 10
    • 0034712843 scopus 로고    scopus 로고
    • Robust perfect adaptation in bacterial chemotaxis through integral feedback control
    • Yi TM, Huang Y, Simon MI, Doyle J, (2000) Robust perfect adaptation in bacterial chemotaxis through integral feedback control. Proc Natl Acad Sci U S A 97: 4649-4653.
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 4649-4653
    • Yi, T.M.1    Huang, Y.2    Simon, M.I.3    Doyle, J.4
  • 11
    • 1842484290 scopus 로고    scopus 로고
    • From molecular noise to behavioural variability in a single bacterium
    • Korobkova E, Emonet T, Vilar JM, Shimizu TS, Cluzel P, (2004) From molecular noise to behavioural variability in a single bacterium. Nature 428: 574-578.
    • (2004) Nature , vol.428 , pp. 574-578
    • Korobkova, E.1    Emonet, T.2    Vilar, J.M.3    Shimizu, T.S.4    Cluzel, P.5
  • 12
    • 84884684873 scopus 로고    scopus 로고
    • Adaptation dynamics in densely clustered chemoreceptors
    • Pontius W, Sneddon MW, Emonet T, (2013) Adaptation dynamics in densely clustered chemoreceptors. PLoS Comput Biol 9: e1003230.
    • (2013) PLoS Comput Biol , vol.9
    • Pontius, W.1    Sneddon, M.W.2    Emonet, T.3
  • 13
    • 84862570016 scopus 로고    scopus 로고
    • Chemotactic adaptation kinetics of individual Escherichia coli cells
    • Min TL, Mears PJ, Golding I, Chemla YR, (2012) Chemotactic adaptation kinetics of individual Escherichia coli cells. Proc Natl Acad Sci U S A 109: 9869-9874.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 9869-9874
    • Min, T.L.1    Mears, P.J.2    Golding, I.3    Chemla, Y.R.4
  • 15
    • 84877782979 scopus 로고    scopus 로고
    • Quantitative modeling of bacterial chemotaxis: signal amplification and accurate adaptation
    • Tu Y, (2013) Quantitative modeling of bacterial chemotaxis: signal amplification and accurate adaptation. Annu Rev Biophys 42: 337-359.
    • (2013) Annu Rev Biophys , vol.42 , pp. 337-359
    • Tu, Y.1
  • 17
    • 76549110816 scopus 로고    scopus 로고
    • Bacterial strategies for chemotaxis response
    • Celani A, Vergassola M, (2010) Bacterial strategies for chemotaxis response. Proc Natl Acad Sci U S A 107: 1391-1396.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 1391-1396
    • Celani, A.1    Vergassola, M.2
  • 18
    • 0041673353 scopus 로고    scopus 로고
    • The rotary motor of bacterial flagella
    • Berg HC, (2003) The rotary motor of bacterial flagella. Annual review of biochemistry 72: 19-54.
    • (2003) Annual Review of Biochemistry , vol.72 , pp. 19-54
    • Berg, H.C.1
  • 19
    • 0034009901 scopus 로고    scopus 로고
    • An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells
    • Cluzel P, Surette M, Leibler S, (2000) An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells. Science (New York, NY) 287: 1652-1655.
    • (2000) Science (New York, NY) , vol.287 , pp. 1652-1655
    • Cluzel, P.1    Surette, M.2    Leibler, S.3
  • 20
    • 84877581773 scopus 로고    scopus 로고
    • Ultrasensitivity of an adaptive bacterial motor
    • Yuan J, Berg HC, (2013) Ultrasensitivity of an adaptive bacterial motor. Journal of molecular biology 425: 1760-1764.
    • (2013) Journal of Molecular Biology , vol.425 , pp. 1760-1764
    • Yuan, J.1    Berg, H.C.2
  • 22
    • 69349099313 scopus 로고    scopus 로고
    • Role of translational coupling in robustness of bacterial chemotaxis pathway
    • Lovdok L, Bentele K, Vladimirov N, Muller A, Pop FS, et al. (2009) Role of translational coupling in robustness of bacterial chemotaxis pathway. PLoS Biol 7: e1000171.
    • (2009) PLoS Biol , vol.7
    • Lovdok, L.1    Bentele, K.2    Vladimirov, N.3    Muller, A.4    Pop, F.S.5
  • 23
    • 84859619467 scopus 로고    scopus 로고
    • Adaptation at the output of the chemotaxis signalling pathway
    • Yuan J, Branch RW, Hosu BG, Berg HC, (2012) Adaptation at the output of the chemotaxis signalling pathway. Nature 484: 233-236.
    • (2012) Nature , vol.484 , pp. 233-236
    • Yuan, J.1    Branch, R.W.2    Hosu, B.G.3    Berg, H.C.4
  • 24
    • 84870599344 scopus 로고    scopus 로고
    • Mechanism for adaptive remodeling of the bacterial flagellar switch
    • Lele PP, Branch RW, Nathan VS, Berg HC, (2012) Mechanism for adaptive remodeling of the bacterial flagellar switch. Proc Natl Acad Sci U S A 109: 20018-20022.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 20018-20022
    • Lele, P.P.1    Branch, R.W.2    Nathan, V.S.3    Berg, H.C.4
  • 25
    • 58149156397 scopus 로고    scopus 로고
    • Dependence of bacterial chemotaxis on gradient shape and adaptation rate
    • Vladimirov N, Lovdok L, Lebiedz D, Sourjik V, (2008) Dependence of bacterial chemotaxis on gradient shape and adaptation rate. PLoS Comput Biol 4: e1000242.
    • (2008) PLoS Comput Biol , vol.4
    • Vladimirov, N.1    Lovdok, L.2    Lebiedz, D.3    Sourjik, V.4
  • 26
    • 77954024185 scopus 로고    scopus 로고
    • A modular gradient-sensing network for chemotaxis in Escherichia coli revealed by responses to time-varying stimuli
    • Shimizu TS, Tu Y, Berg HC, (2010) A modular gradient-sensing network for chemotaxis in Escherichia coli revealed by responses to time-varying stimuli. Mol Syst Biol 6: 382.
    • (2010) Mol Syst Biol , vol.6 , pp. 382
    • Shimizu, T.S.1    Tu, Y.2    Berg, H.C.3
  • 27
    • 84864245887 scopus 로고    scopus 로고
    • Pathway-based mean-field model for Escherichia coli chemotaxis
    • Si G, Wu T, Ouyang Q, Tu Y, (2012) Pathway-based mean-field model for Escherichia coli chemotaxis. Phys Rev Lett 109: 048101.
    • (2012) Phys Rev Lett , vol.109 , pp. 048101
    • Si, G.1    Wu, T.2    Ouyang, Q.3    Tu, Y.4
  • 28
    • 0017185026 scopus 로고
    • Non-genetic individuality: chance in the single cell
    • Spudich JL, Koshland DE Jr, (1976) Non-genetic individuality: chance in the single cell. Nature 262: 467-471.
    • (1976) Nature , vol.262 , pp. 467-471
    • Spudich, J.L.1    Koshland Jr., D.E.2
  • 29
    • 84857131363 scopus 로고    scopus 로고
    • Noninvasive inference of the molecular chemotactic response using bacterial trajectories
    • Masson JB, Voisinne G, Wong-Ng J, Celani A, Vergassola M, (2012) Noninvasive inference of the molecular chemotactic response using bacterial trajectories. Proc Natl Acad Sci U S A 109: 1802-1807.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 1802-1807
    • Masson, J.B.1    Voisinne, G.2    Wong-Ng, J.3    Celani, A.4    Vergassola, M.5
  • 30
    • 0001180444 scopus 로고
    • Transient response to chemotactic stimuli in Escherichia coli
    • Berg HC, Tedesco PM, (1975) Transient response to chemotactic stimuli in Escherichia coli. Proc Natl Acad Sci U S A 72: 3235-3239.
    • (1975) Proc Natl Acad Sci U S A , vol.72 , pp. 3235-3239
    • Berg, H.C.1    Tedesco, P.M.2
  • 31
    • 78650179829 scopus 로고    scopus 로고
    • Interdependence of behavioural variability and response to small stimuli in bacteria
    • Park H, Pontius W, Guet CC, Marko JF, Emonet T, et al. (2010) Interdependence of behavioural variability and response to small stimuli in bacteria. Nature 468: 819-823.
    • (2010) Nature , vol.468 , pp. 819-823
    • Park, H.1    Pontius, W.2    Guet, C.C.3    Marko, J.F.4    Emonet, T.5
  • 32
    • 33751396142 scopus 로고    scopus 로고
    • Optimal noise filtering in the chemotactic response of Escherichia coli
    • Andrews BW, Yi TM, Iglesias PA, (2006) Optimal noise filtering in the chemotactic response of Escherichia coli. PLoS Comput Biol 2: e154.
    • (2006) PLoS Comput Biol , vol.2
    • Andrews, B.W.1    Yi, T.M.2    Iglesias, P.A.3
  • 33
    • 21544461236 scopus 로고    scopus 로고
    • The bacterial chemotactic response reflects a compromise between transient and steady-state behavior
    • Clark DA, Grant LC, (2005) The bacterial chemotactic response reflects a compromise between transient and steady-state behavior. Proc Natl Acad Sci U S A 102: 9150-9155.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 9150-9155
    • Clark, D.A.1    Grant, L.C.2
  • 34
    • 11244251890 scopus 로고    scopus 로고
    • Chemotaxis: the role of internal delays
    • de Gennes PG, (2004) Chemotaxis: the role of internal delays. Eur Biophys J 33: 691-693.
    • (2004) Eur Biophys J , vol.33 , pp. 691-693
    • de Gennes, P.G.1
  • 35
    • 84898759922 scopus 로고    scopus 로고
    • Escherichia coli swimming is robust against variations in flagellar number
    • Mears PJ, Koirala S, Rao CV, Golding I, Chemla YR, (2014) Escherichia coli swimming is robust against variations in flagellar number. eLife 3: e01916.
    • (2014) ELife , vol.3
    • Mears, P.J.1    Koirala, S.2    Rao, C.V.3    Golding, I.4    Chemla, Y.R.5
  • 37
    • 84876908077 scopus 로고    scopus 로고
    • Excitation and Adaptation in Bacteria-a Model Signal Transduction System that Controls Taxis and Spatial Pattern Formation
    • Othmer HG, Xin X, Xue C, (2013) Excitation and Adaptation in Bacteria-a Model Signal Transduction System that Controls Taxis and Spatial Pattern Formation. International journal of molecular sciences 14: 9205-9248.
    • (2013) International Journal of Molecular Sciences , vol.14 , pp. 9205-9248
    • Othmer, H.G.1    Xin, X.2    Xue, C.3
  • 38
    • 84867576761 scopus 로고    scopus 로고
    • Tandem adaptation with a common design in Escherichia coli chemotaxis
    • Tu Y, Berg HC, (2012) Tandem adaptation with a common design in Escherichia coli chemotaxis. Journal of molecular biology 423: 782-788.
    • (2012) Journal of Molecular Biology , vol.423 , pp. 782-788
    • Tu, Y.1    Berg, H.C.2
  • 39
    • 84859025649 scopus 로고    scopus 로고
    • Frequency-Dependent Escherichia coli Chemotaxis Behavior
    • Zhu X, Si G, Deng N, Ouyang Q, Wu T, et al. (2012) Frequency-Dependent Escherichia coli Chemotaxis Behavior. Phys Rev Lett 108: 128101.
    • (2012) Phys Rev Lett , vol.108 , pp. 128101
    • Zhu, X.1    Si, G.2    Deng, N.3    Ouyang, Q.4    Wu, T.5
  • 40
    • 1242274449 scopus 로고    scopus 로고
    • Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems
    • Angeli D, Ferrell JE Jr, Sontag ED, (2004) Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems. Proc Natl Acad Sci U S A 101: 1822-1827.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 1822-1827
    • Angeli, D.1    Ferrell Jr., J.E.2    Sontag, E.D.3
  • 42
    • 0034015656 scopus 로고    scopus 로고
    • Real-time imaging of fluorescent flagellar filaments
    • Turner L, Ryu WS, Berg HC, (2000) Real-time imaging of fluorescent flagellar filaments. J Bacteriol 182: 2793-2801.
    • (2000) J Bacteriol , vol.182 , pp. 2793-2801
    • Turner, L.1    Ryu, W.S.2    Berg, H.C.3
  • 43
  • 44
    • 68749109249 scopus 로고    scopus 로고
    • Directional persistence and the optimality of run-and-tumble chemotaxis
    • Nicolau DV Jr, Armitage JP, Maini PK, (2009) Directional persistence and the optimality of run-and-tumble chemotaxis. Comput Biol Chem 33: 269-274.
    • (2009) Comput Biol Chem , vol.33 , pp. 269-274
    • Nicolau Jr., D.V.1    Armitage, J.P.2    Maini, P.K.3
  • 45
    • 34547268987 scopus 로고    scopus 로고
    • Persistence of direction increases the drift velocity of run and tumble chemotaxis
    • Locsei JT, (2007) Persistence of direction increases the drift velocity of run and tumble chemotaxis. Journal of Mathematical Biology 55: 41-60.
    • (2007) Journal of Mathematical Biology , vol.55 , pp. 41-60
    • Locsei, J.T.1
  • 46
    • 42149109049 scopus 로고    scopus 로고
    • Relationship between cellular response and behavioral variability in bacterial chemotaxis
    • Emonet T, Cluzel P, (2008) Relationship between cellular response and behavioral variability in bacterial chemotaxis. Proc Natl Acad Sci U S A 105: 3304-3309.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 3304-3309
    • Emonet, T.1    Cluzel, P.2


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