메뉴 건너뛰기




Volumn 29, Issue , 2014, Pages 73-79

Cultivation of moonmilk-born non-extremophilic Thaumand Euryarchaeota in mixed culture

Author keywords

Cave; Cultivable Archaea; Euryarchaeota; Moonmilk; Non extremophilic Archaea; Thaumarchaeota

Indexed keywords

CALCIUM CARBONATE; METHANE; ARCHAEAL DNA; RNA 16S;

EID: 84902365920     PISSN: 10759964     EISSN: 10958274     Source Type: Journal    
DOI: 10.1016/j.anaerobe.2013.10.002     Document Type: Article
Times cited : (19)

References (36)
  • 1
    • 76349125984 scopus 로고    scopus 로고
    • Global ecological patterns in uncultured Archaea
    • Auguet J.C., Barberan A., Casamayor E.O. Global ecological patterns in uncultured Archaea. ISME 2010, 4:182-190.
    • (2010) ISME , vol.4 , pp. 182-190
    • Auguet, J.C.1    Barberan, A.2    Casamayor, E.O.3
  • 2
    • 40949111460 scopus 로고    scopus 로고
    • Ahotspot for cold Crenarchaeota in the neuston of high mountain lakes
    • Auguet J.C., Casamayor E.O. Ahotspot for cold Crenarchaeota in the neuston of high mountain lakes. Environ Microbiol 2008, 10:1080-1086.
    • (2008) Environ Microbiol , vol.10 , pp. 1080-1086
    • Auguet, J.C.1    Casamayor, E.O.2
  • 4
    • 39149118031 scopus 로고    scopus 로고
    • Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota
    • Brochier-Armanet C., Boussau B., Gribaldo S., Forterre P. Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Micorbiol 2008, 6:245-252.
    • (2008) Nat Rev Micorbiol , vol.6 , pp. 245-252
    • Brochier-Armanet, C.1    Boussau, B.2    Gribaldo, S.3    Forterre, P.4
  • 6
    • 1542401220 scopus 로고    scopus 로고
    • Molecular phylogenetic analysis of Archaea and bacteria in Wind Cave, South Dakota
    • Chelius M.K., Moore J.C. Molecular phylogenetic analysis of Archaea and bacteria in Wind Cave, South Dakota. Geomicrob J 2004, 21:123-134.
    • (2004) Geomicrob J , vol.21 , pp. 123-134
    • Chelius, M.K.1    Moore, J.C.2
  • 7
    • 74949095880 scopus 로고    scopus 로고
    • Diverse Archaeal community of a bat guano pile in Domica cave (Slovak Karst, Slovakia)
    • Chronakova A., Horak A., Elhottova D., Kristufek V. Diverse Archaeal community of a bat guano pile in Domica cave (Slovak Karst, Slovakia). Folia Microbiol 2009, 54:436-446.
    • (2009) Folia Microbiol , vol.54 , pp. 436-446
    • Chronakova, A.1    Horak, A.2    Elhottova, D.3    Kristufek, V.4
  • 8
    • 67649841562 scopus 로고    scopus 로고
    • Cottonballs, a unique subaqeous moonmilk, and abundant subaerial moonmilk in Cataract cave, Tongass National Forest, Alaska
    • Curry M.D., Boston P.J., Spilde M.N., Naichtal J.F., Campbell A.R. Cottonballs, a unique subaqeous moonmilk, and abundant subaerial moonmilk in Cataract cave, Tongass National Forest, Alaska. Int J Speleol 2009, 38:111-128.
    • (2009) Int J Speleol , vol.38 , pp. 111-128
    • Curry, M.D.1    Boston, P.J.2    Spilde, M.N.3    Naichtal, J.F.4    Campbell, A.R.5
  • 9
    • 0031769609 scopus 로고    scopus 로고
    • Everything in moderation: archaea as 'non-extremophiles'
    • DeLong E.F. Everything in moderation: archaea as 'non-extremophiles'. Curr Opin Genet Dev 1998, 8:649-654.
    • (1998) Curr Opin Genet Dev , vol.8 , pp. 649-654
    • DeLong, E.F.1
  • 11
    • 80051699847 scopus 로고    scopus 로고
    • Enigma of the recent methane budget
    • Heimann M. Enigma of the recent methane budget. Nature 2011, 476:157-158.
    • (2011) Nature , vol.476 , pp. 157-158
    • Heimann, M.1
  • 12
    • 36549000261 scopus 로고    scopus 로고
    • Thermogymnomonas acidicola gen. nov., sp. nov., a novel thermoacidophilic, cell wall-less archaeon in the order Thermoplasmatales, isolated from a solfataric soil in Hakone, Japan
    • Itoh T., Yoshikawa N., Takashina T. Thermogymnomonas acidicola gen. nov., sp. nov., a novel thermoacidophilic, cell wall-less archaeon in the order Thermoplasmatales, isolated from a solfataric soil in Hakone, Japan. Int J Syst Evol Micr 2007, 57:2557-2561.
    • (2007) Int J Syst Evol Micr , vol.57 , pp. 2557-2561
    • Itoh, T.1    Yoshikawa, N.2    Takashina, T.3
  • 13
    • 0035945618 scopus 로고    scopus 로고
    • Archaeal dominance in the mesopelagic zone of the Pacific Ocean
    • Karner M.B., DeLong E.F., Karl D.M. Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Lett Nat 2001, 409:507-510.
    • (2001) Lett Nat , vol.409 , pp. 507-510
    • Karner, M.B.1    DeLong, E.F.2    Karl, D.M.3
  • 14
    • 67651085544 scopus 로고    scopus 로고
    • Description of Paenisporosarcina quisquiliarum gen. nov., sp. nov., and reclassification of Sporosarcina macmurdoensis Reddy etal. 2003 as Paenisporosarcina macmurdoensis comb. Nov
    • Krishnamurthi S., Bhattacharya A., Mayilraj S., Saha P., Schumann P., Chakrabarti T. Description of Paenisporosarcina quisquiliarum gen. nov., sp. nov., and reclassification of Sporosarcina macmurdoensis Reddy etal. 2003 as Paenisporosarcina macmurdoensis comb. Nov. IJSEM 2001, 59:1364-1370.
    • (2001) IJSEM , vol.59 , pp. 1364-1370
    • Krishnamurthi, S.1    Bhattacharya, A.2    Mayilraj, S.3    Saha, P.4    Schumann, P.5    Chakrabarti, T.6
  • 15
    • 84858293841 scopus 로고    scopus 로고
    • Development and evaluation of inocula combating high acetate concentrations during the start-up of an anaerobic digestion
    • Lins P., Reitschuler C., Illmer P. Development and evaluation of inocula combating high acetate concentrations during the start-up of an anaerobic digestion. Bioresour Technol 2012, 110:167-173.
    • (2012) Bioresour Technol , vol.110 , pp. 167-173
    • Lins, P.1    Reitschuler, C.2    Illmer, P.3
  • 16
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G., DeWaal E.C., Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 1993, 59:695-700.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 695-700
    • Muyzer, G.1    DeWaal, E.C.2    Uitterlinden, A.G.3
  • 17
    • 33745792553 scopus 로고    scopus 로고
    • Crenarchaeal community assembly and microdiversity in developing soils at two sites associated with deglaciation
    • Nicol G.W., Tscherko D., Chang L., Hammesfahr U., Prosser J.I. Crenarchaeal community assembly and microdiversity in developing soils at two sites associated with deglaciation. Environ Microbiol 2006, 8:1382-1393.
    • (2006) Environ Microbiol , vol.8 , pp. 1382-1393
    • Nicol, G.W.1    Tscherko, D.2    Chang, L.3    Hammesfahr, U.4    Prosser, J.I.5
  • 18
    • 79952297493 scopus 로고    scopus 로고
    • Eukaryal and archaeal diversity in a submerged sinkhole ecosystem influenced by sulfur-rich, hypoxic groundwater
    • Nold S.C., Zajack H.A., Biddanda B.A. Eukaryal and archaeal diversity in a submerged sinkhole ecosystem influenced by sulfur-rich, hypoxic groundwater. JGreat Lakes Res 2010, 36:366-375.
    • (2010) JGreat Lakes Res , vol.36 , pp. 366-375
    • Nold, S.C.1    Zajack, H.A.2    Biddanda, B.A.3
  • 19
    • 79959289950 scopus 로고    scopus 로고
    • The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology
    • Pester M., Schleper C., Wagner M. The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol 2011, 14:300-306.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 300-306
    • Pester, M.1    Schleper, C.2    Wagner, M.3
  • 20
    • 68949221577 scopus 로고    scopus 로고
    • Is the availability of different nutrients a critical factor for the impact of bacteria on subterraneous carbon budgets?
    • Portillo M.C., Porca E., Cuezva S., Canaveras J.C., Sanchez-Moral S., Gonzalez J.M. Is the availability of different nutrients a critical factor for the impact of bacteria on subterraneous carbon budgets?. Naturwissenschaften 2009, 96:1035-1042.
    • (2009) Naturwissenschaften , vol.96 , pp. 1035-1042
    • Portillo, M.C.1    Porca, E.2    Cuezva, S.3    Canaveras, J.C.4    Sanchez-Moral, S.5    Gonzalez, J.M.6
  • 21
    • 84891659495 scopus 로고    scopus 로고
    • Primer evaluation and adaption for cost-efficient SYBR green-based qPCR and its applicability for specific quantification of methanogens
    • 1-12, in press
    • Reitschuler C., Lins P., Illmer P. Primer evaluation and adaption for cost-efficient SYBR green-based qPCR and its applicability for specific quantification of methanogens. World J Microbiol Biotechnol 2013, 1-12, in press.
    • (2013) World J Microbiol Biotechnol
    • Reitschuler, C.1    Lins, P.2    Illmer, P.3
  • 22
    • 0032240058 scopus 로고    scopus 로고
    • The importance of pH in the regulation of ruminal acetate topropionate ratio and methane production invitro
    • Russell J.B. The importance of pH in the regulation of ruminal acetate topropionate ratio and methane production invitro. JDairy Sci 1998, 81:3222-3230.
    • (1998) JDairy Sci , vol.81 , pp. 3222-3230
    • Russell, J.B.1
  • 24
    • 38049087631 scopus 로고    scopus 로고
    • Tetraether membrane lipids of Candidatus "Aciduliprofundum boonei", a cultivated obligate thermoacidophilic euryarchaeote from deep-sea hydrothermal vents
    • Schouten S., Baas M., Hopmans E.C., Reysenbach A.-L., Damste J.S.S. Tetraether membrane lipids of Candidatus "Aciduliprofundum boonei", a cultivated obligate thermoacidophilic euryarchaeote from deep-sea hydrothermal vents. Extremophiles 2008, 12:119-124.
    • (2008) Extremophiles , vol.12 , pp. 119-124
    • Schouten, S.1    Baas, M.2    Hopmans, E.C.3    Reysenbach, A.-L.4    Damste, J.S.S.5
  • 25
    • 0034857157 scopus 로고    scopus 로고
    • Asingle band does not always represent single bacterial strains in denaturing gradient gel electrophoresis analysis
    • Sekiguchi H., Tomioka N., Nakahara T., Uchiyama H. Asingle band does not always represent single bacterial strains in denaturing gradient gel electrophoresis analysis. Biotechnol Lett 2001, 23:1205-1208.
    • (2001) Biotechnol Lett , vol.23 , pp. 1205-1208
    • Sekiguchi, H.1    Tomioka, N.2    Nakahara, T.3    Uchiyama, H.4
  • 26
    • 33846524416 scopus 로고    scopus 로고
    • Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses
    • Shelobolina E.S., Nevin K.P., Blakeney-Hayward J.D., Johnsen C.V., Plaia T.W., Krader P., et al. Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses. IJSEM 2007, 57:126-135.
    • (2007) IJSEM , vol.57 , pp. 126-135
    • Shelobolina, E.S.1    Nevin, K.P.2    Blakeney-Hayward, J.D.3    Johnsen, C.V.4    Plaia, T.W.5    Krader, P.6
  • 27
    • 39149100341 scopus 로고    scopus 로고
    • Physiological heterogeneity in biofilms
    • Steward P.S., Franklin M.J. Physiological heterogeneity in biofilms. Nat Rev 2008, 6:199-210.
    • (2008) Nat Rev , vol.6 , pp. 199-210
    • Steward, P.S.1    Franklin, M.J.2
  • 28
    • 0030067991 scopus 로고    scopus 로고
    • Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
    • Suzuki M.T., Giovannoni S.J. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol 1996, 62:625-630.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 625-630
    • Suzuki, M.T.1    Giovannoni, S.J.2
  • 29
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum Likelihood, evolutionary distance, and maximum Parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum Likelihood, evolutionary distance, and maximum Parsimony methods. Mol Biol Evol 2011, 28:2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 31
    • 77956264290 scopus 로고    scopus 로고
    • Utilisation of single added fatty acids by consortia of digester sludge in batch culture
    • Wagner A.O., Gstrauntaler G., Illmer P. Utilisation of single added fatty acids by consortia of digester sludge in batch culture. Waste Manag 2010, 30:1822-1827.
    • (2010) Waste Manag , vol.30 , pp. 1822-1827
    • Wagner, A.O.1    Gstrauntaler, G.2    Illmer, P.3
  • 32
    • 84864302312 scopus 로고    scopus 로고
    • Asimple method for the enumeration of methanogens by most probable number counting
    • Wagner A.O., Lins P., Illmer P. Asimple method for the enumeration of methanogens by most probable number counting. Biomass Bioenerg 2012, 45:311-314.
    • (2012) Biomass Bioenerg , vol.45 , pp. 311-314
    • Wagner, A.O.1    Lins, P.2    Illmer, P.3
  • 33
    • 77952739182 scopus 로고    scopus 로고
    • Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea
    • Walker C.B., de la Torre J.R., Klotz M.G., Urakawa H., Pinel N., Arp D.J., et al. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. PNAS 2010, 117:8818-8823.
    • (2010) PNAS , vol.117 , pp. 8818-8823
    • Walker, C.B.1    de la Torre, J.R.2    Klotz, M.G.3    Urakawa, H.4    Pinel, N.5    Arp, D.J.6
  • 34
    • 0345195995 scopus 로고    scopus 로고
    • Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis
    • von Wintzingerode F., Gobel U.B., Stackebrandt E. Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol Res 1997, 21:213-229.
    • (1997) FEMS Microbiol Res , vol.21 , pp. 213-229
    • von Wintzingerode, F.1    Gobel, U.B.2    Stackebrandt, E.3
  • 36
    • 16344363305 scopus 로고    scopus 로고
    • Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction
    • Yu Y., Lee C., Hwang S. Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction. Biotechnol Bioeng 2004, 89:670-679.
    • (2004) Biotechnol Bioeng , vol.89 , pp. 670-679
    • Yu, Y.1    Lee, C.2    Hwang, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.