메뉴 건너뛰기




Volumn 13, Issue 6, 2014, Pages 2998-3015

ITRAQ-based quantitative proteomics analysis revealed alterations of carbohydrate metabolism pathways and mitochondrial proteins in a male sterile cybrid pummelo

Author keywords

cybrid; male sterility; mitochondria; primary metabolites; proteome; transcriptome

Indexed keywords

ISOCITRATE DEHYDROGENASE; MALATE DEHYDROGENASE; MITOCHONDRIAL PROTEIN; PROTEASOME; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; PYRUVATE DEHYDROGENASE; RIBOSOME PROTEIN; PROTEOME; TRANSCRIPTOME; VEGETABLE PROTEIN;

EID: 84902106429     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr500126g     Document Type: Article
Times cited : (58)

References (88)
  • 1
    • 79951727479 scopus 로고    scopus 로고
    • Protoplast fusion for production of tetraploids and triploids: Applications for scion and rootstock breeding in citrus
    • Grosser, J. W.; Gmitter, F. G., Jr. Protoplast fusion for production of tetraploids and triploids: applications for scion and rootstock breeding in citrus Plant Cell, Tissue Organ Cult. 2011, 104 (3) 343-357
    • (2011) Plant Cell, Tissue Organ Cult. , vol.104 , Issue.3 , pp. 343-357
    • Grosser, J.W.1    Gmitter, Jr.F.G.2
  • 2
    • 84888842825 scopus 로고    scopus 로고
    • Somatic cybrid production via protoplast fusion for citrus improvement
    • Guo, W. W.; Xiao, S. X.; Deng, X. X. Somatic cybrid production via protoplast fusion for citrus improvement Sci. Hortic. 2013, 163 (5) 20-26
    • (2013) Sci. Hortic. , vol.163 , Issue.5 , pp. 20-26
    • Guo, W.W.1    Xiao, S.X.2    Deng, X.X.3
  • 3
    • 0030724182 scopus 로고    scopus 로고
    • Aborted anthers of Citrus result from gene-cytoplasmic male sterility
    • Yamamoto, M.; Matsumoto, R.; Okudai, N.; Yamada, Y. Aborted anthers of Citrus result from gene-cytoplasmic male sterility Sci. Hortic. 1997, 70 (1) 9-14
    • (1997) Sci. Hortic. , vol.70 , Issue.1 , pp. 9-14
    • Yamamoto, M.1    Matsumoto, R.2    Okudai, N.3    Yamada, Y.4
  • 4
    • 2442588886 scopus 로고    scopus 로고
    • Targeted cybridization in citrus: Transfer of Satsuma cytoplasm to seedy cultivars for potential seedlessness
    • Guo, W. W.; Prasad, D.; Cheng, Y. J.; Serrano, P.; Deng, X. X.; Grosser, J. W. Targeted cybridization in citrus: transfer of Satsuma cytoplasm to seedy cultivars for potential seedlessness Plant Cell Rep. 2004, 22 (10) 752-758
    • (2004) Plant Cell Rep. , vol.22 , Issue.10 , pp. 752-758
    • Guo, W.W.1    Prasad, D.2    Cheng, Y.J.3    Serrano, P.4    Deng, X.X.5    Grosser, J.W.6
  • 5
    • 67649989148 scopus 로고    scopus 로고
    • Cybrid/hybrid plants regenerated from somatic fusions between male sterile Satsuma mandarin and seedy tangelos
    • Cai, X. D.; Fu, J.; Chen, C. L.; Guo, W. W. Cybrid/hybrid plants regenerated from somatic fusions between male sterile Satsuma mandarin and seedy tangelos Sci. Hortic. 2009, 122 (2) 323-327
    • (2009) Sci. Hortic. , vol.122 , Issue.2 , pp. 323-327
    • Cai, X.D.1    Fu, J.2    Chen, C.L.3    Guo, W.W.4
  • 6
    • 84890877037 scopus 로고    scopus 로고
    • Production and molecular characterization of diploid and tetraploid somatic cybrid plants between male sterile Satsuma mandarin and seedy sweet orange cultivars
    • Xiao, S. X.; Biswas, M. K.; Li, M. Y.; Deng, X. X.; Xu, Q.; Guo, W. W. Production and molecular characterization of diploid and tetraploid somatic cybrid plants between male sterile Satsuma mandarin and seedy sweet orange cultivars Plant Cell, Tissue Organ Cult. 2014, 116 (1) 81-88
    • (2014) Plant Cell, Tissue Organ Cult. , vol.116 , Issue.1 , pp. 81-88
    • Xiao, S.X.1    Biswas, M.K.2    Li, M.Y.3    Deng, X.X.4    Xu, Q.5    Guo, W.W.6
  • 7
    • 78149498395 scopus 로고    scopus 로고
    • Proteomic analysis of leaves from a diploid cybrid produced by protoplast fusion between Satsuma mandarin and pummelo
    • Wang, L.; Pan, Z. Y.; Guo, W. W. Proteomic analysis of leaves from a diploid cybrid produced by protoplast fusion between Satsuma mandarin and pummelo Plant Cell, Tissue Organ Cult. 2010, 103 (2) 165-174
    • (2010) Plant Cell, Tissue Organ Cult. , vol.103 , Issue.2 , pp. 165-174
    • Wang, L.1    Pan, Z.Y.2    Guo, W.W.3
  • 8
    • 84865472809 scopus 로고    scopus 로고
    • Comparative transcript profiling of a male sterile cybrid pummelo and its fertile type revealed altered gene expression related to flower development
    • Zheng, B. B.; Wu, X. M.; Ge, X. X.; Deng, X. X.; Grosser, J. W.; Guo, W. W. Comparative transcript profiling of a male sterile cybrid pummelo and its fertile type revealed altered gene expression related to flower development PLoS One 2012, 7 (8) e43758
    • (2012) PLoS One , vol.7 , Issue.8 , pp. 43758
    • Zheng, B.B.1    Wu, X.M.2    Ge, X.X.3    Deng, X.X.4    Grosser, J.W.5    Guo, W.W.6
  • 9
    • 2942696655 scopus 로고    scopus 로고
    • Interactions of mitochondrial and nuclear genes that affect male gametophyte development
    • Hanson, M. R.; Bentolila, S. Interactions of mitochondrial and nuclear genes that affect male gametophyte development Plant Cell 2004, 16 (suppl 1) S154-S169
    • (2004) Plant Cell , vol.16 , Issue.SUPPL. 1
    • Hanson, M.R.1    Bentolila, S.2
  • 10
    • 54149119585 scopus 로고    scopus 로고
    • Genome barriers between nuclei and mitochondria exemplified by cytoplasmic male Ssterility
    • Fujii, S.; Toriyama, K. Genome barriers between nuclei and mitochondria exemplified by cytoplasmic male Ssterility Plant Cell Physiol. 2008, 49 (10) 1484-1494
    • (2008) Plant Cell Physiol. , vol.49 , Issue.10 , pp. 1484-1494
    • Fujii, S.1    Toriyama, K.2
  • 11
  • 14
    • 58249105102 scopus 로고    scopus 로고
    • An anther-specific dihydroflavonol 4-reductase-like gene (DRL1) is essential for male fertility in Arabidopsis
    • Tang, L. K.; Chu, H.; Yip, W. K.; Yeung, E. C.; Lo, C. An anther-specific dihydroflavonol 4-reductase-like gene (DRL1) is essential for male fertility in Arabidopsis New Phytol. 2009, 181 (3) 576-587
    • (2009) New Phytol. , vol.181 , Issue.3 , pp. 576-587
    • Tang, L.K.1    Chu, H.2    Yip, W.K.3    Yeung, E.C.4    Lo, C.5
  • 15
    • 70349648642 scopus 로고    scopus 로고
    • CYP704B1 is a long-chain fatty acid ?-hydroxylase essential for sporopollenin synthesis in pollen of Arabidopsis
    • Dobritsa, A. A.; Shrestha, J.; Morant, M.; Pinot, F.; Matsuno, M.; Swanson, R.; Møller, B. L.; Preuss, D. CYP704B1 is a long-chain fatty acid ?-hydroxylase essential for sporopollenin synthesis in pollen of Arabidopsis Plant Physiol. 2009, 151 (2) 574-589
    • (2009) Plant Physiol. , vol.151 , Issue.2 , pp. 574-589
    • Dobritsa, A.A.1    Shrestha, J.2    Morant, M.3    Pinot, F.4    Matsuno, M.5    Swanson, R.6    Møller, B.L.7    Preuss, D.8
  • 16
    • 34347387493 scopus 로고    scopus 로고
    • CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen
    • Morant, M.; Jørgensen, K.; Schaller, H.; Pinot, F.; Møller, B. L.; Werck-Reichhart, D.; Bak, S. CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen Plant Cell 2007, 19 (5) 1473-1487
    • (2007) Plant Cell , vol.19 , Issue.5 , pp. 1473-1487
    • Morant, M.1    Jørgensen, K.2    Schaller, H.3    Pinot, F.4    Møller, B.L.5    Werck-Reichhart, D.6    Bak, S.7
  • 17
    • 77957728922 scopus 로고    scopus 로고
    • ATP-binding cassette transporter G26 is required for male fertility and pollen exine formation in Arabidopsis
    • Quilichini, T. D.; Friedmann, M. C.; Samuels, A. L.; Douglas, C. J. ATP-binding cassette transporter G26 is required for male fertility and pollen exine formation in Arabidopsis Plant Physiol. 2010, 154 (2) 678-690
    • (2010) Plant Physiol. , vol.154 , Issue.2 , pp. 678-690
    • Quilichini, T.D.1    Friedmann, M.C.2    Samuels, A.L.3    Douglas, C.J.4
  • 18
    • 84872351937 scopus 로고    scopus 로고
    • ABCG15 encodes an ABC transporter protein, and is essential for post-meiotic anther and pollen exine development in Rice
    • Qin, P.; Tu, B.; Wang, Y. P.; Deng, L. C.; Quilichini, T. D.; Li, T.; Wang, H.; Ma, B. T.; Li, S. G. ABCG15 encodes an ABC transporter protein, and is essential for post-meiotic anther and pollen exine development in Rice Plant Cell Physiol. 2013, 54 (1) 138-154
    • (2013) Plant Cell Physiol. , vol.54 , Issue.1 , pp. 138-154
    • Qin, P.1    Tu, B.2    Wang, Y.P.3    Deng, L.C.4    Quilichini, T.D.5    Li, T.6    Wang, H.7    Ma, B.T.8    Li, S.G.9
  • 20
    • 2442543417 scopus 로고    scopus 로고
    • Respiratory metabolism: Glycolysis, the TCA cycle and mitochondrial electron transport
    • Fernie, A. R.; Carrari, F.; Sweetlove, L. J. Respiratory metabolism: glycolysis, the TCA cycle and mitochondrial electron transport Curr. Opin. Plant Biol. 2004, 7 (3) 254-261
    • (2004) Curr. Opin. Plant Biol. , vol.7 , Issue.3 , pp. 254-261
    • Fernie, A.R.1    Carrari, F.2    Sweetlove, L.J.3
  • 21
    • 34447314196 scopus 로고    scopus 로고
    • From structure to dynamics of metabolic pathways: Application to the plant mitochondrial TCA cycle
    • Steuer, R.; Nesi, A. N.; Fernie, A. R.; Gross, T.; Blasius, B.; Selbig, J. From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle Bioinformatics 2007, 23 (11) 1378-1385
    • (2007) Bioinformatics , vol.23 , Issue.11 , pp. 1378-1385
    • Steuer, R.1    Nesi, A.N.2    Fernie, A.R.3    Gross, T.4    Blasius, B.5    Selbig, J.6
  • 22
    • 0038477095 scopus 로고    scopus 로고
    • Antisense inhibition of mitochondrial pyruvate dehydrogenase E1α subunit in anther tapetum causes male sterility
    • Yui, R.; Iketani, S.; Mikami, T.; Kubo, T. Antisense inhibition of mitochondrial pyruvate dehydrogenase E1α subunit in anther tapetum causes male sterility Plant J. 2003, 34 (1) 57-66
    • (2003) Plant J. , vol.34 , Issue.1 , pp. 57-66
    • Yui, R.1    Iketani, S.2    Mikami, T.3    Kubo, T.4
  • 23
    • 72449206775 scopus 로고    scopus 로고
    • Quantitative proteomic analysis of CMS-related changes in Honglian CMS rice anther
    • Sun, Q. P.; Hu, C. F.; Hu, J.; Li, S. Q.; Zhu, Y. G. Quantitative proteomic analysis of CMS-related changes in Honglian CMS rice anther Protein J. 2009, 28 (7-8) 341-348
    • (2009) Protein J. , vol.28 , Issue.78 , pp. 341-348
    • Sun, Q.P.1    Hu, C.F.2    Hu, J.3    Li, S.Q.4    Zhu, Y.G.5
  • 25
    • 84887945254 scopus 로고    scopus 로고
    • Whole mitochondrial genome sequencing and transcriptional analysis to uncover an RT102-type cytoplasmic male sterility-associated candidate gene derived from Oryza rufipogon
    • Okazaki, M.; Kazama, T.; Murata, H.; Motomura, K.; Toriyama, K. Whole mitochondrial genome sequencing and transcriptional analysis to uncover an RT102-type cytoplasmic male sterility-associated candidate gene derived from Oryza rufipogon Plant Cell Physiol. 2013, 54 (9) 1560-1568
    • (2013) Plant Cell Physiol. , vol.54 , Issue.9 , pp. 1560-1568
    • Okazaki, M.1    Kazama, T.2    Murata, H.3    Motomura, K.4    Toriyama, K.5
  • 26
    • 0036581108 scopus 로고    scopus 로고
    • Hybrid seed production and the challenge of propagating male-sterile plants
    • Perez-Prat, E.; van Lookeren Campagne, M. M. Hybrid seed production and the challenge of propagating male-sterile plants Trends Plant Sci. 2002, 7 (5) 199-203
    • (2002) Trends Plant Sci. , vol.7 , Issue.5 , pp. 199-203
    • Perez-Prat, E.1    Van Lookeren Campagne, M.M.2
  • 27
    • 84860493231 scopus 로고    scopus 로고
    • An integrative analysis of transcriptome and proteome provides new insights into carotenoid biosynthesis and regulation in sweet orange fruits
    • Pan, Z. Y.; Zeng, Y. L.; An, J. Y.; Ye, J. L.; Xu, Q.; Deng, X. X. An integrative analysis of transcriptome and proteome provides new insights into carotenoid biosynthesis and regulation in sweet orange fruits J. Proteomics 2012, 75 (15) 4879-4880
    • (2012) J. Proteomics , vol.75 , Issue.15 , pp. 4879-4880
    • Pan, Z.Y.1    Zeng, Y.L.2    An, J.Y.3    Ye, J.L.4    Xu, Q.5    Deng, X.X.6
  • 28
    • 58249125692 scopus 로고    scopus 로고
    • Differential expression of proteins in the wild type and 7B-1 male-sterile mutant anthers of tomato (Solanum lycopersicum): A proteomic analysis
    • Sheoran, I. S.; Ross, A. R. S.; Olson, D. J. H.; Sawhney, V. K. Differential expression of proteins in the wild type and 7B-1 male-sterile mutant anthers of tomato (Solanum lycopersicum): A proteomic analysis J. Proteomics 2009, 71 (6) 624-636
    • (2009) J. Proteomics , vol.71 , Issue.6 , pp. 624-636
    • Sheoran, I.S.1    Ross, A.R.S.2    Olson, D.J.H.3    Sawhney, V.K.4
  • 29
    • 77649332113 scopus 로고    scopus 로고
    • Proteome analysis of the normal and Ogura (ogu) CMS anthers of Brassica napus to identify proteins associated with male sterility
    • Sheoran, I. S.; Sawhney, V. K. Proteome analysis of the normal and Ogura (ogu) CMS anthers of Brassica napus to identify proteins associated with male sterility Botany 2010, 88 (3) 217-230
    • (2010) Botany , vol.88 , Issue.3 , pp. 217-230
    • Sheoran, I.S.1    Sawhney, V.K.2
  • 30
    • 73149100123 scopus 로고    scopus 로고
    • Comparative proteomics of a lycopene-accumulating mutant reveals the important role of oxidative stress on carotenogenesis in sweet orange (Citrus sinensis L osbeck)
    • Pan, Z. Y.; Liu, Q.; Yun, Z.; Guan, R.; Zeng, W. F.; Xu, Q.; Deng, X. X. Comparative proteomics of a lycopene-accumulating mutant reveals the important role of oxidative stress on carotenogenesis in sweet orange (Citrus sinensis L. osbeck) Proteomics 2009, 9 (24) 5455-5470
    • (2009) Proteomics , vol.9 , Issue.24 , pp. 5455-5470
    • Pan, Z.Y.1    Liu, Q.2    Yun, Z.3    Guan, R.4    Zeng, W.F.5    Xu, Q.6    Deng, X.X.7
  • 31
    • 84861388548 scopus 로고    scopus 로고
    • Comparative transcriptomics and proteomics analysis of citrus fruit, to improve understanding of the effect of low temperature on maintaining fruit quality during lengthy post-harvest storage
    • Yun, Z.; Jin, S.; Ding, Y. d.; Wang, Z.; Gao, H. J.; Pan, Z. Y.; Xu, J.; Cheng, Y. J.; Deng, X. X. Comparative transcriptomics and proteomics analysis of citrus fruit, to improve understanding of the effect of low temperature on maintaining fruit quality during lengthy post-harvest storage J. Exp. Bot. 2012, 63 (8) 2873-2893
    • (2012) J. Exp. Bot. , vol.63 , Issue.8 , pp. 2873-2893
    • Yun, Z.1    Jin, S.2    Ding, Y.D.3    Wang, Z.4    Gao, H.J.5    Pan, Z.Y.6    Xu, J.7    Cheng, Y.J.8    Deng, X.X.9
  • 33
    • 80052477299 scopus 로고    scopus 로고
    • Proteomic profiling of two maize inbreds during early gibberella ear rot infection
    • Mohammadi, M.; Anoop, V.; Gleddie, S.; Harris, L. J. Proteomic profiling of two maize inbreds during early gibberella ear rot infection Proteomics 2011, 11 (18) 3675-3684
    • (2011) Proteomics , vol.11 , Issue.18 , pp. 3675-3684
    • Mohammadi, M.1    Anoop, V.2    Gleddie, S.3    Harris, L.J.4
  • 34
    • 84858865242 scopus 로고    scopus 로고
    • Proteomic divergence in Arabidopsis autopolyploids and allopolyploids and their progenitors
    • Ng, D. W. K.; Zhang, C.; Miller, M.; Shen, Z.; Briggs, S. P.; Chen, Z. J. Proteomic divergence in Arabidopsis autopolyploids and allopolyploids and their progenitors Heredity 2012, 108 (4) 419-430
    • (2012) Heredity , vol.108 , Issue.4 , pp. 419-430
    • Ng, D.W.K.1    Zhang, C.2    Miller, M.3    Shen, Z.4    Briggs, S.P.5    Chen, Z.J.6
  • 35
    • 84865547600 scopus 로고    scopus 로고
    • Comparative proteomics of the recently and recurrently formed natural allopolyploid Tragopogon mirus (Asteraceae) and its parents
    • Koh, J.; Chen, S. X.; Zhu, N.; Yu, F. H.; Soltis, P. S.; Soltis, D. E. Comparative proteomics of the recently and recurrently formed natural allopolyploid Tragopogon mirus (Asteraceae) and its parents New Phytol. 2012, 196 (1) 292-305
    • (2012) New Phytol. , vol.196 , Issue.1 , pp. 292-305
    • Koh, J.1    Chen, S.X.2    Zhu, N.3    Yu, F.H.4    Soltis, P.S.5    Soltis, D.E.6
  • 36
    • 80053635374 scopus 로고    scopus 로고
    • Comparative iTRAQ proteome and transcriptome analyses of sweet orange infected by "candidatus Liberibacter asiaticus"
    • Fan, J.; Chen, C. X.; Yu, Q. B.; Brlansky, R. H.; Li, Z. G.; Gmitter, F. G. Comparative iTRAQ proteome and transcriptome analyses of sweet orange infected by "Candidatus Liberibacter asiaticus" Physiol. Plant. 2011, 143 (3) 235-245
    • (2011) Physiol. Plant. , vol.143 , Issue.3 , pp. 235-245
    • Fan, J.1    Chen, C.X.2    Yu, Q.B.3    Brlansky, R.H.4    Li, Z.G.5    Gmitter, F.G.6
  • 37
    • 77956826840 scopus 로고    scopus 로고
    • Two duplicate CYP704B1 -homologous genes BnMs1 and BnMs2 are required for pollen exine formation and tapetal development in Brassica napus
    • Yi, B.; Zeng, F. Q.; Lei, S. L.; Chen, Y. N.; Yao, X. Q.; Zhu, Y.; Wen, J.; Shen, J. X.; Ma, C. Z.; Tu, J. X.; Fu, T. D. Two duplicate CYP704B1 -homologous genes BnMs1 and BnMs2 are required for pollen exine formation and tapetal development in Brassica napus Plant J. 2010, 63 (6) 925-938
    • (2010) Plant J. , vol.63 , Issue.6 , pp. 925-938
    • Yi, B.1    Zeng, F.Q.2    Lei, S.L.3    Chen, Y.N.4    Yao, X.Q.5    Zhu, Y.6    Wen, J.7    Shen, J.X.8    Ma, C.Z.9    Tu, J.X.10    Fu, T.D.11
  • 38
    • 67349266694 scopus 로고    scopus 로고
    • Universal sample preparation method for proteome analysis
    • Wisniewski, J. R.; Zougman, A.; Nagaraj, N.; Mann, M. Universal sample preparation method for proteome analysis Nat. Methods 2009, 6 (5) 359-362
    • (2009) Nat. Methods , vol.6 , Issue.5 , pp. 359-362
    • Wisniewski, J.R.1    Zougman, A.2    Nagaraj, N.3    Mann, M.4
  • 41
    • 40049091938 scopus 로고    scopus 로고
    • A novel bud mutation that confers abnormal patterns of lycopene accumulation in sweet orange fruit (Citrus sinensis L. Osbeck)
    • Liu, Q.; Xu, J.; Liu, Y. Z.; Zhao, X. L.; Deng, X. X.; Guo, L. L.; Gu, J. Q. A novel bud mutation that confers abnormal patterns of lycopene accumulation in sweet orange fruit (Citrus sinensis L. Osbeck) J. Exp. Bot. 2007, 58 (15-16) 4161-4171
    • (2007) J. Exp. Bot. , vol.58 , Issue.1516 , pp. 4161-4171
    • Liu, Q.1    Xu, J.2    Liu, Y.Z.3    Zhao, X.L.4    Deng, X.X.5    Guo, L.L.6    Gu, J.Q.7
  • 42
    • 84866649516 scopus 로고    scopus 로고
    • Comprehending crystalline beta-carotene accumulation by comparing engineered cell models and the natural carotenoid-rich system of citrus
    • Cao, H. B.; Zhang, J. C.; Xu, J. D.; Ye, J. L.; Yun, Z.; Xu, Q.; Xu, J.; Deng, X. X. Comprehending crystalline beta-carotene accumulation by comparing engineered cell models and the natural carotenoid-rich system of citrus J. Exp. Bot. 2012, 63 (12) 4403-4417
    • (2012) J. Exp. Bot. , vol.63 , Issue.12 , pp. 4403-4417
    • Cao, H.B.1    Zhang, J.C.2    Xu, J.D.3    Ye, J.L.4    Yun, Z.5    Xu, Q.6    Xu, J.7    Deng, X.X.8
  • 43
    • 34248580879 scopus 로고    scopus 로고
    • Gas chromatography mass spectrometry-based metabolite profiling in plants
    • Lisec, J.; Schauer, N.; Kopka, J.; Willmitzer, L.; Fernie, A. R. Gas chromatography mass spectrometry-based metabolite profiling in plants Nat. Protoc. 2006, 1 (1) 387-396
    • (2006) Nat. Protoc. , vol.1 , Issue.1 , pp. 387-396
    • Lisec, J.1    Schauer, N.2    Kopka, J.3    Willmitzer, L.4    Fernie, A.R.5
  • 44
    • 84863239359 scopus 로고    scopus 로고
    • BuildSummary: Using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics
    • Sheng, Q. H.; Dai, J.; Wu, Y. B.; Tang, H. X.; Zeng, R. BuildSummary: using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics J. Proteome Res. 2012, 11 (3) 1494-1502
    • (2012) J. Proteome Res. , vol.11 , Issue.3 , pp. 1494-1502
    • Sheng, Q.H.1    Dai, J.2    Wu, Y.B.3    Tang, H.X.4    Zeng, R.5
  • 46
    • 36248989141 scopus 로고    scopus 로고
    • Tom20 recognizes mitochondrial presequences through dynamic equilibrium among multiple bound states
    • Saitoh, T.; Igura, M.; Obita, T.; Ose, T.; Kojima, R.; Maenaka, K.; Endo, T.; Kohda, D. Tom20 recognizes mitochondrial presequences through dynamic equilibrium among multiple bound states EMBO J. 2007, 26 (22) 4777-4787
    • (2007) EMBO J. , vol.26 , Issue.22 , pp. 4777-4787
    • Saitoh, T.1    Igura, M.2    Obita, T.3    Ose, T.4    Kojima, R.5    Maenaka, K.6    Endo, T.7    Kohda, D.8
  • 47
    • 84877597520 scopus 로고    scopus 로고
    • Integrative proteomic and transcriptomic analyses reveal multiple post-transcriptional regulatory mechanisms of mouse spermatogenesis
    • Gan, H. Y.; Cai, T. X.; Lin, X. W.; Wu, Y. J.; Wang, X. X.; Yang, F. Q.; Han, C. S. Integrative proteomic and transcriptomic analyses reveal multiple post-transcriptional regulatory mechanisms of mouse spermatogenesis Mol. Cell. Proteomics 2013, 12, 1144-1157
    • (2013) Mol. Cell. Proteomics , vol.12 , pp. 1144-1157
    • Gan, H.Y.1    Cai, T.X.2    Lin, X.W.3    Wu, Y.J.4    Wang, X.X.5    Yang, F.Q.6    Han, C.S.7
  • 48
    • 84880054600 scopus 로고    scopus 로고
    • ITRAQ based quantitative proteomics approach validated the role of calcyclin binding protein (CacyBP) in promoting colorectal cancer metastasis
    • Ghosh, D.; Li, Z. H.; Tan, X. F.; Lim, T. K.; Mao, Y. B.; Lin, Q. S. iTRAQ based quantitative proteomics approach validated the role of calcyclin binding protein (CacyBP) in promoting colorectal cancer metastasis Mol. Cell. Proteomics 2013, 12, 1865-1880
    • (2013) Mol. Cell. Proteomics , vol.12 , pp. 1865-1880
    • Ghosh, D.1    Li, Z.H.2    Tan, X.F.3    Lim, T.K.4    Mao, Y.B.5    Lin, Q.S.6
  • 49
    • 84880063582 scopus 로고    scopus 로고
    • Integrative omics analysis reveals the importance and scope of translational repression in microRNA-mediated regulation
    • Liu, Q.; Halvey, P. J.; Shyr, Y.; Slebos, R. J.; Liebler, D. C.; Zhang, B. Integrative omics analysis reveals the importance and scope of translational repression in microRNA-mediated regulation Mol. Cell. Proteomics 2013, 12, 1900-1911
    • (2013) Mol. Cell. Proteomics , vol.12 , pp. 1900-1911
    • Liu, Q.1    Halvey, P.J.2    Shyr, Y.3    Slebos, R.J.4    Liebler, D.C.5    Zhang, B.6
  • 50
    • 84877588295 scopus 로고    scopus 로고
    • The metabolic regulation of sporulation and parasporal crystal formation in Bacillus thuringiensis revealed by transcriptomics and proteomics
    • Wang, J. P.; Mei, H.; Zheng, C.; Qian, H. L.; Cui, C.; Fu, Y.; Su, J. M.; Liu, Z. D.; Yu, Z. N.; He, J. The metabolic regulation of sporulation and parasporal crystal formation in Bacillus thuringiensis revealed by transcriptomics and proteomics Mol. Cell. Proteomics 2013, 12, 1363-1376
    • (2013) Mol. Cell. Proteomics , vol.12 , pp. 1363-1376
    • Wang, J.P.1    Mei, H.2    Zheng, C.3    Qian, H.L.4    Cui, C.5    Fu, Y.6    Su, J.M.7    Liu, Z.D.8    Yu, Z.N.9    He, J.10
  • 51
    • 84858439862 scopus 로고    scopus 로고
    • Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
    • Vogel, C.; Marcotte, E. M. Insights into the regulation of protein abundance from proteomic and transcriptomic analyses Nat. Rev. Genet. 2012, 13 (4) 227-232
    • (2012) Nat. Rev. Genet. , vol.13 , Issue.4 , pp. 227-232
    • Vogel, C.1    Marcotte, E.M.2
  • 54
    • 79551618858 scopus 로고    scopus 로고
    • MiR156-targeted and nontargeted SBP-box transcription factors act in concert to secure male fertility in Arabidopsis
    • Xing, S.; Salinas, M.; Höhmann, S.; Berndtgen, R.; Huijser, P. miR156-targeted and nontargeted SBP-box transcription factors act in concert to secure male fertility in Arabidopsis Plant Cell 2010, 22 (12) 3935-3950
    • (2010) Plant Cell , vol.22 , Issue.12 , pp. 3935-3950
    • Xing, S.1    Salinas, M.2    Höhmann, S.3    Berndtgen, R.4    Huijser, P.5
  • 55
    • 33745632126 scopus 로고    scopus 로고
    • Plant fertility defects induced by the enhanced expression of microRNA167
    • Ru, P.; Xu, L.; Ma, H.; Huang, H. Plant fertility defects induced by the enhanced expression of microRNA167 Cell Res. 2006, 16 (5) 457-465
    • (2006) Cell Res. , vol.16 , Issue.5 , pp. 457-465
    • Ru, P.1    Xu, L.2    Ma, H.3    Huang, H.4
  • 56
    • 84876292554 scopus 로고    scopus 로고
    • Comparative expression profiling of miRNA during anther development in genetic male sterile and wild type cotton
    • Wei, M.; Wei, H.; Wu, M.; Song, M.; Zhang, J.; Yu, J.; Fan, S.; Yu, S. Comparative expression profiling of miRNA during anther development in genetic male sterile and wild type cotton BMC Plant Biol. 2013, 13, 66
    • (2013) BMC Plant Biol. , vol.13 , pp. 66
    • Wei, M.1    Wei, H.2    Wu, M.3    Song, M.4    Zhang, J.5    Yu, J.6    Fan, S.7    Yu, S.8
  • 57
    • 84872141330 scopus 로고    scopus 로고
    • Identification of miRNAs and their targets using high-throughput sequencing and degradome analysis in cytoplasmic male-sterile and its maintainer fertile lines of Brassica juncea
    • Yang, J.; Liu, X.; Xu, B.; Zhao, N.; Yang, X.; Zhang, M. Identification of miRNAs and their targets using high-throughput sequencing and degradome analysis in cytoplasmic male-sterile and its maintainer fertile lines of Brassica juncea BMC Genomics 2013, 14, 9
    • (2013) BMC Genomics , vol.14 , pp. 9
    • Yang, J.1    Liu, X.2    Xu, B.3    Zhao, N.4    Yang, X.5    Zhang, M.6
  • 59
    • 0035344460 scopus 로고    scopus 로고
    • Versatility of the mitochondrial protein import machinery
    • Pfanner, N.; Geissler, A. Versatility of the mitochondrial protein import machinery Nat. Rev. Mol. Cell Biol. 2001, 2 (5) 339-349
    • (2001) Nat. Rev. Mol. Cell Biol. , vol.2 , Issue.5 , pp. 339-349
    • Pfanner, N.1    Geissler, A.2
  • 60
    • 77956090193 scopus 로고    scopus 로고
    • Mitochondrial protein import: From proteomics to functional mechanisms
    • Schmidt, O.; Pfanner, N.; Meisinger, C. Mitochondrial protein import: from proteomics to functional mechanisms Nat. Rev. Mol. Cell Biol. 2010, 11 (9) 655-667
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , Issue.9 , pp. 655-667
    • Schmidt, O.1    Pfanner, N.2    Meisinger, C.3
  • 61
    • 84875427473 scopus 로고    scopus 로고
    • Reduced activity of ATP synthase in mitochondria causes cytoplasmic male sterility in chili pepper
    • Li, J. J.; Pandeya, D.; Jo, Y. D.; Liu, W. Y.; Kang, B. C. Reduced activity of ATP synthase in mitochondria causes cytoplasmic male sterility in chili pepper Planta 2013, 237 (4) 1097-109
    • (2013) Planta , vol.237 , Issue.4 , pp. 1097-1109
    • Li, J.J.1    Pandeya, D.2    Jo, Y.D.3    Liu, W.Y.4    Kang, B.C.5
  • 62
    • 0034092633 scopus 로고    scopus 로고
    • Male-sterile tobacco displays abnormal mitochondrial atp1 transcript accumulation and reduced floral ATP/ADP ratio
    • Bergman, P.; Edqvist, J.; Farbos, I.; Glimelius, K. Male-sterile tobacco displays abnormal mitochondrial atp1 transcript accumulation and reduced floral ATP/ADP ratio Plant Mol. Biol. 2000, 42 (3) 531-544
    • (2000) Plant Mol. Biol. , vol.42 , Issue.3 , pp. 531-544
    • Bergman, P.1    Edqvist, J.2    Farbos, I.3    Glimelius, K.4
  • 63
    • 17144420561 scopus 로고    scopus 로고
    • Modified sucrose, starch, and ATP levels in two alloplasmic male-sterile lines of B.napus
    • Teixeira, R. T.; Knorpp, C.; Glimelius, K. Modified sucrose, starch, and ATP levels in two alloplasmic male-sterile lines of B.napus J. Exp. Bot. 2005, 56 (414) 1245-1253
    • (2005) J. Exp. Bot. , vol.56 , Issue.414 , pp. 1245-1253
    • Teixeira, R.T.1    Knorpp, C.2    Glimelius, K.3
  • 64
    • 38749106247 scopus 로고    scopus 로고
    • Structure, function and regulation of plant proteasomes
    • Kurepa, J.; Smalle, J. A. Structure, function and regulation of plant proteasomes Biochimie 2008, 90 (2) 324-335
    • (2008) Biochimie , vol.90 , Issue.2 , pp. 324-335
    • Kurepa, J.1    Smalle, J.A.2
  • 65
    • 66149141767 scopus 로고    scopus 로고
    • Loss of 26S proteasome function leads to increased cell size and decreased cell number in Arabidopsis shoot organs
    • Kurepa, J.; Wang, S.; Li, Y.; Zaitlin, D.; Pierce, A. J.; Smalle, J. A. Loss of 26S proteasome function leads to increased cell size and decreased cell number in Arabidopsis shoot organs Plant Physiol. 2009, 150 (1) 178-189
    • (2009) Plant Physiol. , vol.150 , Issue.1 , pp. 178-189
    • Kurepa, J.1    Wang, S.2    Li, Y.3    Zaitlin, D.4    Pierce, A.J.5    Smalle, J.A.6
  • 66
    • 80052900728 scopus 로고    scopus 로고
    • Arabidopsis RPT2a encoding the 26S proteasome subunit is required for various aspects of root meristem maintenance, and regulates gametogenesis redundantly with its homolog, RPT2b
    • Ueda, M.; Matsui, K.; Ishiguro, S.; Kato, T.; Tabata, S.; Kobayashi, M.; Seki, M.; Shinozaki, K.; Okada, K. Arabidopsis RPT2a encoding the 26S proteasome subunit is required for various aspects of root meristem maintenance, and regulates gametogenesis redundantly with its homolog, RPT2b Plant Cell Physiol. 2011, 52 (9) 1628-1640
    • (2011) Plant Cell Physiol. , vol.52 , Issue.9 , pp. 1628-1640
    • Ueda, M.1    Matsui, K.2    Ishiguro, S.3    Kato, T.4    Tabata, S.5    Kobayashi, M.6    Seki, M.7    Shinozaki, K.8    Okada, K.9
  • 67
    • 84863012234 scopus 로고    scopus 로고
    • The RPT2 subunit of the 26S proteasome directs complex assembly, histone dynamics, and gametophyte and sporophyte development in Arabidopsis
    • Lee, K. H.; Minami, A.; Marshall, R. S.; Book, A. J.; Farmer, L. M.; Walker, J. M.; Vierstra, R. D. The RPT2 subunit of the 26S proteasome directs complex assembly, histone dynamics, and gametophyte and sporophyte development in Arabidopsis Plant Cell 2011, 23 (12) 4298-4317
    • (2011) Plant Cell , vol.23 , Issue.12 , pp. 4298-4317
    • Lee, K.H.1    Minami, A.2    Marshall, R.S.3    Book, A.J.4    Farmer, L.M.5    Walker, J.M.6    Vierstra, R.D.7
  • 68
    • 64749095658 scopus 로고    scopus 로고
    • The RPN5 subunit of the 26S proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis
    • Book, A. J.; Smalle, J.; Lee, K. H.; Yang, P. Z.; Walker, J. M.; Casper, S.; Holmes, J. H.; Russo, L. A.; Buzzinotti, Z. W.; Jenik, P. D. The RPN5 subunit of the 26S proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis Plant Cell 2009, 21 (2) 460-478
    • (2009) Plant Cell , vol.21 , Issue.2 , pp. 460-478
    • Book, A.J.1    Smalle, J.2    Lee, K.H.3    Yang, P.Z.4    Walker, J.M.5    Casper, S.6    Holmes, J.H.7    Russo, L.A.8    Buzzinotti, Z.W.9    Jenik, P.D.10
  • 69
    • 48749116067 scopus 로고    scopus 로고
    • Ubiquitin-proteasome-dependent degradation of a mitofusin, a critical regulator of mitochondrial fusion
    • Cohen, M. M.; Leboucher, G. P.; Livnat-Levanon, N.; Glickman, M. H.; Weissman, A. M. Ubiquitin-proteasome-dependent degradation of a mitofusin, a critical regulator of mitochondrial fusion Mol. Biol. Cell 2008, 19 (6) 2457-2464
    • (2008) Mol. Biol. Cell , vol.19 , Issue.6 , pp. 2457-2464
    • Cohen, M.M.1    Leboucher, G.P.2    Livnat-Levanon, N.3    Glickman, M.H.4    Weissman, A.M.5
  • 70
    • 77956800819 scopus 로고    scopus 로고
    • Mitochondrial dynamics and its responds to proteasome defection during Picea wilsonii pollen tube development
    • Sheng, X. Y.; Dong, X. L.; Zhang, S. S.; Jiang, L. P.; Zhu, J.; Wang, L. Mitochondrial dynamics and its responds to proteasome defection during Picea wilsonii pollen tube development Cell Biochem. Funct. 2010, 28 (5) 420-425
    • (2010) Cell Biochem. Funct. , vol.28 , Issue.5 , pp. 420-425
    • Sheng, X.Y.1    Dong, X.L.2    Zhang, S.S.3    Jiang, L.P.4    Zhu, J.5    Wang, L.6
  • 71
    • 0034978496 scopus 로고    scopus 로고
    • Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family
    • Sung, D. Y.; Vierling, E.; Guy, C. L. Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family Plant Physiol. 2001, 126 (2) 789-800
    • (2001) Plant Physiol. , vol.126 , Issue.2 , pp. 789-800
    • Sung, D.Y.1    Vierling, E.2    Guy, C.L.3
  • 72
    • 34447528828 scopus 로고    scopus 로고
    • The heat shock protein 70 family: Highly homologous proteins with overlapping and distinct functions
    • Daugaard, M.; Rohde, M.; Jäättelä, M. The heat shock protein 70 family: Highly homologous proteins with overlapping and distinct functions FEBS Lett. 2007, 581 (19) 3702-3710
    • (2007) FEBS Lett. , vol.581 , Issue.19 , pp. 3702-3710
    • Daugaard, M.1    Rohde, M.2    Jäättelä, M.3
  • 73
    • 0034076573 scopus 로고    scopus 로고
    • Repression of hspA2 messenger RNA in human testes with abnormal spermatogenesis
    • Son, W. Y.; Han, C. T.; Hwang, S. H.; Lee, J. H.; Kim, S.; Kim, Y. C. Repression of hspA2 messenger RNA in human testes with abnormal spermatogenesis Fertil. Steril. 2000, 73 (6) 1138-1144
    • (2000) Fertil. Steril. , vol.73 , Issue.6 , pp. 1138-1144
    • Son, W.Y.1    Han, C.T.2    Hwang, S.H.3    Lee, J.H.4    Kim, S.5    Kim, Y.C.6
  • 74
    • 84876460101 scopus 로고    scopus 로고
    • Investigation of the mechanisms by which the molecular chaperone HSPA2 regulates the expression of sperm surface receptors involved in human sperm-oocyte recognition
    • Redgrove, K. A.; Anderson, A. L.; McLaughlin, E. A.; O'Bryan, M. K.; Aitken, R. J.; Nixon, B. Investigation of the mechanisms by which the molecular chaperone HSPA2 regulates the expression of sperm surface receptors involved in human sperm-oocyte recognition Mol. Hum. Reprod. 2013, 19 (3) 120-135
    • (2013) Mol. Hum. Reprod. , vol.19 , Issue.3 , pp. 120-135
    • Redgrove, K.A.1    Anderson, A.L.2    McLaughlin, E.A.3    O'Bryan, M.K.4    Aitken, R.J.5    Nixon, B.6
  • 78
    • 0030864750 scopus 로고    scopus 로고
    • HSP70-2 is required for CDC2 kinase activity in meiosis i of mouse spermatocytes
    • Zhu, D. H.; Dix, D. J.; Eddy, E. HSP70-2 is required for CDC2 kinase activity in meiosis I of mouse spermatocytes Development 1997, 124 (15) 3007-3014
    • (1997) Development , vol.124 , Issue.15 , pp. 3007-3014
    • Zhu, D.H.1    Dix, D.J.2    Eddy, E.3
  • 79
    • 80051693551 scopus 로고    scopus 로고
    • The RNA-binding protein ELAVL1/HuR is essential for mouse spermatogenesis, acting both at meiotic and postmeiotic stages
    • Chi, M. N.; Auriol, J.; Jégou, B.; Kontoyiannis, D. L.; Turner, J. M.; De Rooij, D. G.; Morello, D. The RNA-binding protein ELAVL1/HuR is essential for mouse spermatogenesis, acting both at meiotic and postmeiotic stages Mol. Biol. Cell 2011, 22 (16) 2875-2885
    • (2011) Mol. Biol. Cell , vol.22 , Issue.16 , pp. 2875-2885
    • Chi, M.N.1    Auriol, J.2    Jégou, B.3    Kontoyiannis, D.L.4    Turner, J.M.5    De Rooij, D.G.6    Morello, D.7
  • 80
    • 82155162650 scopus 로고    scopus 로고
    • Beyond transcription: RNA-binding proteins as emerging regulators of plant response to environmental constraints
    • Ambrosone, A.; Costa, A.; Leone, A.; Grillo, S. Beyond transcription: RNA-binding proteins as emerging regulators of plant response to environmental constraints Plant Sci. 2012, 182, 12-18
    • (2012) Plant Sci. , vol.182 , pp. 12-18
    • Ambrosone, A.1    Costa, A.2    Leone, A.3    Grillo, S.4
  • 81
    • 0033151899 scopus 로고    scopus 로고
    • The roles of RNA-binding proteins in spermatogenesis and male infertility
    • Venables, J.; Eperon, I. The roles of RNA-binding proteins in spermatogenesis and male infertility Curr. Opin. Genet. Dev. 1999, 9 (3) 346-354
    • (1999) Curr. Opin. Genet. Dev. , vol.9 , Issue.3 , pp. 346-354
    • Venables, J.1    Eperon, I.2
  • 82
    • 0036332994 scopus 로고    scopus 로고
    • HUA ENHANCER2, a putative DExH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis
    • Western, T. L.; Cheng, Y.; Liu, J.; Chen, X. HUA ENHANCER2, a putative DExH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis Development 2002, 129 (7) 1569-1581
    • (2002) Development , vol.129 , Issue.7 , pp. 1569-1581
    • Western, T.L.1    Cheng, Y.2    Liu, J.3    Chen, X.4
  • 83
    • 0037239887 scopus 로고    scopus 로고
    • Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana
    • Cheng, Y.; Kato, N.; Wang, W.; Li, J.; Chen, X. Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana Developmental Cell 2003, 4 (1) 53-66
    • (2003) Developmental Cell , vol.4 , Issue.1 , pp. 53-66
    • Cheng, Y.1    Kato, N.2    Wang, W.3    Li, J.4    Chen, X.5
  • 84
    • 78651088310 scopus 로고    scopus 로고
    • Cytochrome P450 metabolizing fatty acids in plants: Characterization and physiological roles
    • Pinot, F.; Beisson, F. Cytochrome P450 metabolizing fatty acids in plants: characterization and physiological roles FEBS J. 2011, 278 (2) 195-205
    • (2011) FEBS J. , vol.278 , Issue.2 , pp. 195-205
    • Pinot, F.1    Beisson, F.2
  • 86
    • 77950366388 scopus 로고    scopus 로고
    • Cytochrome P450 family member CYP704B2 catalyzes the ?-hydroxylation of fatty acids and is required for anther cutin biosynthesis and pollen exine formation in rice
    • Li, H.; Pinot, F.; Sauveplane, V.; Werck-Reichhart, D.; Diehl, P.; Schreiber, L.; Franke, R.; Zhang, P.; Chen, L.; Gao, Y. W. Cytochrome P450 family member CYP704B2 catalyzes the ?-hydroxylation of fatty acids and is required for anther cutin biosynthesis and pollen exine formation in rice Plant Cell 2010, 22 (1) 173-190
    • (2010) Plant Cell , vol.22 , Issue.1 , pp. 173-190
    • Li, H.1    Pinot, F.2    Sauveplane, V.3    Werck-Reichhart, D.4    Diehl, P.5    Schreiber, L.6    Franke, R.7    Zhang, P.8    Chen, L.9    Gao, Y.W.10
  • 87
    • 0031838906 scopus 로고    scopus 로고
    • Biogenesis and function of the lipidic structures of pollen grains
    • Piffanelli, P.; Ross, J. H.; Murphy, D. Biogenesis and function of the lipidic structures of pollen grains Sex. Plant Reprod. 1998, 11 (2) 65-80
    • (1998) Sex. Plant Reprod. , vol.11 , Issue.2 , pp. 65-80
    • Piffanelli, P.1    Ross, J.H.2    Murphy, D.3
  • 88
    • 69249246092 scopus 로고    scopus 로고
    • From Arabidopsis to rice: Pathways in pollen development
    • Wilson, Z. A.; Zhang, D. B. From Arabidopsis to rice: pathways in pollen development J. Exp. Bot. 2009, 60 (5) 1479-1492
    • (2009) J. Exp. Bot. , vol.60 , Issue.5 , pp. 1479-1492
    • Wilson, Z.A.1    Zhang, D.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.