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Volumn 23, Issue 11, 2007, Pages 1378-1385

From structure to dynamics of metabolic pathways: Application to the plant mitochondrial TCA cycle

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TRICARBOXYLIC ACID;

EID: 34447314196     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btm065     Document Type: Article
Times cited : (67)

References (18)
  • 1
    • 0344824417 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network
    • Famili,I. et al. (2003) Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network. Proc. Nat. Acad. Sci. USA. 100 13134-13139.
    • (2003) Proc. Nat. Acad. Sci. USA , vol.100 , pp. 13134-13139
    • Famili, I.1
  • 2
    • 0034778216 scopus 로고    scopus 로고
    • Analysis of the compartmentation of glycolytic intermediates, nucleotides, sugars, organic acids, amino acids, and sugar alcohols in potato tubers using a nonaqueous fractionation method
    • Farré,E.M. et al. (2001) Analysis of the compartmentation of glycolytic intermediates, nucleotides, sugars, organic acids, amino acids, and sugar alcohols in potato tubers using a nonaqueous fractionation method. Plant Physiol., 127, 685-700.
    • (2001) Plant Physiol , vol.127 , pp. 685-700
    • Farré, E.M.1
  • 3
    • 4444277707 scopus 로고    scopus 로고
    • Metabolite profiling: From diagnostics to systems biology
    • Fernie,A.R. et al. (2004) Metabolite profiling: From diagnostics to systems biology. Nat. Rev. Mol. Cell Biol., 5, 1-7.
    • (2004) Nat. Rev. Mol. Cell Biol , vol.5 , pp. 1-7
    • Fernie, A.R.1
  • 4
    • 0027132883 scopus 로고
    • On the function of mitochondrial metabolism during photosynthesis in spinach leaves
    • Hanning,I. and Heldt, H.W. (1993) On the function of mitochondrial metabolism during photosynthesis in spinach leaves. Plant Physiol. 103, 1147-1154.
    • (1993) Plant Physiol , vol.103 , pp. 1147-1154
    • Hanning, I.1    Heldt, H.W.2
  • 6
    • 0002110851 scopus 로고    scopus 로고
    • Carbon metabolism in mitochondria
    • Dennis,D.T, Turpin,D.H, Lefebvre,D.D. and Layzell,D.B, eds, 2nd edn. Addison Wesley Longman, Harlow, UK, pp
    • Hill,S.A. (1997) Carbon metabolism in mitochondria. In Dennis,D.T., Turpin,D.H., Lefebvre,D.D. and Layzell,D.B. (eds). In Plant Metabolism. 2nd edn. Addison Wesley Longman, Harlow, UK, pp. 181-199.
    • (1997) In Plant Metabolism , pp. 181-199
    • Hill, S.A.1
  • 7
    • 33745780500 scopus 로고    scopus 로고
    • Network motifs: Structure does not determine function
    • Ingram,P.J. et al. (2006) Network motifs: Structure does not determine function. BMC Genomics, 7, 108.
    • (2006) BMC Genomics , vol.7 , pp. 108
    • Ingram, P.J.1
  • 8
    • 18244406832 scopus 로고    scopus 로고
    • Inferring dynamic properties of biochemical reaction networks from structural knowledge
    • Klipp,E. et al. (2004) Inferring dynamic properties of biochemical reaction networks from structural knowledge. Genome Inform. Series 15, 125-137.
    • (2004) Genome Inform. Series , vol.15 , pp. 125-137
    • Klipp, E.1
  • 9
    • 27244440301 scopus 로고    scopus 로고
    • Biochemical networks with uncertain parameters
    • Liebermeister,W. and Klipp,E. (2005) Biochemical networks with uncertain parameters. IEE Proc. Syst. Biol., 152, 97-107.
    • (2005) IEE Proc. Syst. Biol , vol.152 , pp. 97-107
    • Liebermeister, W.1    Klipp, E.2
  • 10
    • 0001082984 scopus 로고
    • Control of the Krebs cycle in arum Spadix
    • MacDougall,A.J. and ap Rees,T. (1991) Control of the Krebs cycle in arum Spadix. J. Plant Physiol., 137, 683-690.
    • (1991) J. Plant Physiol , vol.137 , pp. 683-690
    • MacDougall, A.J.1    ap Rees, T.2
  • 11
    • 27844551326 scopus 로고    scopus 로고
    • Dynamic properties of network motifs contribute to biological network organization
    • Prill,R.J. et al. (2005) Dynamic properties of network motifs contribute to biological network organization. PLoS Biol., 3 1881-1892.
    • (2005) PLoS Biol , vol.3 , pp. 1881-1892
    • Prill, R.J.1
  • 12
    • 0036678794 scopus 로고    scopus 로고
    • Assigning numbers to the arrows: Parameterizing a gene regulation network by using accurate expression kinetic
    • Ronen,M. et al. (2002). Assigning numbers to the arrows: parameterizing a gene regulation network by using accurate expression kinetic. PNAS, 99, 10555-10560.
    • (2002) PNAS , vol.99 , pp. 10555-10560
    • Ronen, M.1
  • 13
    • 0033080396 scopus 로고    scopus 로고
    • Detection of elementary flux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering
    • Schuster,S. et al. (1999). Detection of elementary flux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering. TIBTECH, 17, 53-60.
    • (1999) TIBTECH , vol.17 , pp. 53-60
    • Schuster, S.1
  • 14
    • 0034064689 scopus 로고    scopus 로고
    • A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic systems
    • Schuster,S. et al (2000) A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic systems. Nat. Biotechnol., 18, 326-332.
    • (2000) Nat. Biotechnol , vol.18 , pp. 326-332
    • Schuster, S.1
  • 15
    • 2442549780 scopus 로고    scopus 로고
    • Understanding flux in plant metabolic networks
    • Schwender,J. et al. (2004) Understanding flux in plant metabolic networks. Curr. Opin. Plant Biol., 7, 309-317.
    • (2004) Curr. Opin. Plant Biol , vol.7 , pp. 309-317
    • Schwender, J.1
  • 16
    • 0037079050 scopus 로고    scopus 로고
    • Metabolic network structure determines key aspects of functionality and regulation
    • Stelling,J. et al. (2002) Metabolic network structure determines key aspects of functionality and regulation. Nature, 420, 190-193.
    • (2002) Nature , vol.420 , pp. 190-193
    • Stelling, J.1
  • 17
    • 33747061013 scopus 로고    scopus 로고
    • Structural kinetic modeling of metabolic networks
    • Steuer,R. et al. (2006). Structural kinetic modeling of metabolic networks. Proc. Natl Acad. Sci. USA, 103, 11868-11873.
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 11868-11873
    • Steuer, R.1
  • 18
    • 32944461132 scopus 로고    scopus 로고
    • Regulation of metabolic networks: Understanding metabolic complexity in the systems biology era
    • Sweetlove,L.J. and Fernie,A.R. (2005). Regulation of metabolic networks: understanding metabolic complexity in the systems biology era. New-Phytologist, 168, 9-24.
    • (2005) New-Phytologist , vol.168 , pp. 9-24
    • Sweetlove, L.J.1    Fernie, A.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.