-
1
-
-
84857430552
-
Chromatin replication and epigenome maintenance
-
Alabert C., Groth A. Chromatin replication and epigenome maintenance. Nat. Rev. Mol. Cell Biol. 2012, 13:153-167.
-
(2012)
Nat. Rev. Mol. Cell Biol.
, vol.13
, pp. 153-167
-
-
Alabert, C.1
Groth, A.2
-
2
-
-
34548789595
-
Replication in hydroxyurea: it's a matter of time
-
Alvino G.M., Collingwood D., Murphy J.M., Delrow J., Brewer B.J., Raghuraman M.K. Replication in hydroxyurea: it's a matter of time. Mol. Cell. Biol. 2007, 27:6396-6406.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 6396-6406
-
-
Alvino, G.M.1
Collingwood, D.2
Murphy, J.M.3
Delrow, J.4
Brewer, B.J.5
Raghuraman, M.K.6
-
3
-
-
2442660397
-
The Rpd3-Sin3 histone deacetylase regulates replication timing and enables intra-S origin control in Saccharomyces cerevisiae
-
Aparicio J.G., Viggiani C.J., Gibson D.G., Aparicio O.M. The Rpd3-Sin3 histone deacetylase regulates replication timing and enables intra-S origin control in Saccharomyces cerevisiae. Mol. Cell. Biol. 2004, 24:4769-4780.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 4769-4780
-
-
Aparicio, J.G.1
Viggiani, C.J.2
Gibson, D.G.3
Aparicio, O.M.4
-
4
-
-
3943054839
-
The Sir2 family of protein deacetylases
-
Blander G., Guarente L. The Sir2 family of protein deacetylases. Annu. Rev. Biochem. 2004, 73:417-435.
-
(2004)
Annu. Rev. Biochem.
, vol.73
, pp. 417-435
-
-
Blander, G.1
Guarente, L.2
-
5
-
-
0024291357
-
A replication fork barrier at the 3' end of yeast ribosomal RNA genes
-
Brewer B.J., Fangman W.L. A replication fork barrier at the 3' end of yeast ribosomal RNA genes. Cell 1988, 55:637-643.
-
(1988)
Cell
, vol.55
, pp. 637-643
-
-
Brewer, B.J.1
Fangman, W.L.2
-
6
-
-
84863886256
-
H4K16 acetylation affects recombination and ncRNA transcription at rDNA in Saccharomyces cerevisiae
-
Cesarini E., D'Alfonso A., Camilloni G. H4K16 acetylation affects recombination and ncRNA transcription at rDNA in Saccharomyces cerevisiae. Mol. Biol. Cell 2012, 23:2770-2781.
-
(2012)
Mol. Biol. Cell
, vol.23
, pp. 2770-2781
-
-
Cesarini, E.1
D'Alfonso, A.2
Camilloni, G.3
-
7
-
-
0037423223
-
Survival of DNA damage in yeast directly depends on increased dNTP levels allowed by relaxed feedback inhibition of ribonucleotide reductase
-
Chabes A., Georgieva B., Domkin V., Zhao X., Rothstein R., Thelander L. Survival of DNA damage in yeast directly depends on increased dNTP levels allowed by relaxed feedback inhibition of ribonucleotide reductase. Cell 2003, 112:391-401.
-
(2003)
Cell
, vol.112
, pp. 391-401
-
-
Chabes, A.1
Georgieva, B.2
Domkin, V.3
Zhao, X.4
Rothstein, R.5
Thelander, L.6
-
8
-
-
84882919775
-
Titration of four replication factors is essential for the Xenopus laevis midblastula transition
-
Collart C., Allen G.E., Bradshaw C.R., Smith J.C., Zegerman P. Titration of four replication factors is essential for the Xenopus laevis midblastula transition. Science 2013, 341:893-896.
-
(2013)
Science
, vol.341
, pp. 893-896
-
-
Collart, C.1
Allen, G.E.2
Bradshaw, C.R.3
Smith, J.C.4
Zegerman, P.5
-
9
-
-
78549290265
-
Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response
-
Crabbé L., Thomas A., Pantesco V., De Vos J., Pasero P., Lengronne A. Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response. Nat. Struct. Mol. Biol. 2010, 17:1391-1397.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1391-1397
-
-
Crabbé, L.1
Thomas, A.2
Pantesco, V.3
De Vos, J.4
Pasero, P.5
Lengronne, A.6
-
10
-
-
43049124410
-
An ARS element inhibits DNA replication through a SIR2-dependent mechanism
-
Crampton A., Chang F., Pappas D.L., Frisch R.L., Weinreich M. An ARS element inhibits DNA replication through a SIR2-dependent mechanism. Mol. Cell 2008, 30:156-166.
-
(2008)
Mol. Cell
, vol.30
, pp. 156-166
-
-
Crampton, A.1
Chang, F.2
Pappas, D.L.3
Frisch, R.L.4
Weinreich, M.5
-
11
-
-
79952902707
-
Defining the replication program through the chromatin landscape
-
Ding Q., MacAlpine D.M. Defining the replication program through the chromatin landscape. Crit. Rev. Biochem. Mol. Biol. 2011, 46:165-179.
-
(2011)
Crit. Rev. Biochem. Mol. Biol.
, vol.46
, pp. 165-179
-
-
Ding, Q.1
MacAlpine, D.M.2
-
12
-
-
77949887506
-
Mammalian sirtuins: biological insights and disease relevance
-
Haigis M.C., Sinclair D.A. Mammalian sirtuins: biological insights and disease relevance. Annu. Rev. Pathol. 2010, 5:253-295.
-
(2010)
Annu. Rev. Pathol.
, vol.5
, pp. 253-295
-
-
Haigis, M.C.1
Sinclair, D.A.2
-
13
-
-
76249101086
-
Abundance of ribosomal RNA gene copies maintains genome integrity
-
Ide S., Miyazaki T., Maki H., Kobayashi T. Abundance of ribosomal RNA gene copies maintains genome integrity. Science 2010, 327:693-696.
-
(2010)
Science
, vol.327
, pp. 693-696
-
-
Ide, S.1
Miyazaki, T.2
Maki, H.3
Kobayashi, T.4
-
14
-
-
23744505997
-
Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression
-
Irlbacher H., Franke J., Manke T., Vingron M., Ehrenhofer-Murray A.E. Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression. Genes Dev. 2005, 19:1811-1822.
-
(2005)
Genes Dev.
, vol.19
, pp. 1811-1822
-
-
Irlbacher, H.1
Franke, J.2
Manke, T.3
Vingron, M.4
Ehrenhofer-Murray, A.E.5
-
15
-
-
0033214237
-
The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms
-
Kaeberlein M., McVey M., Guarente L. The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms. Genes Dev. 1999, 13:2570-2580.
-
(1999)
Genes Dev.
, vol.13
, pp. 2570-2580
-
-
Kaeberlein, M.1
McVey, M.2
Guarente, L.3
-
16
-
-
65449160972
-
Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae
-
Knott S.R., Viggiani C.J., Tavaré S., Aparicio O.M. Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae. Genes Dev. 2009, 23:1077-1090.
-
(2009)
Genes Dev.
, vol.23
, pp. 1077-1090
-
-
Knott, S.R.1
Viggiani, C.J.2
Tavaré, S.3
Aparicio, O.M.4
-
17
-
-
84856103786
-
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae
-
Knott S.R., Peace J.M., Ostrow A.Z., Gan Y., Rex A.E., Viggiani C.J., Tavaré S., Aparicio O.M. Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae. Cell 2012, 148:99-111.
-
(2012)
Cell
, vol.148
, pp. 99-111
-
-
Knott, S.R.1
Peace, J.M.2
Ostrow, A.Z.3
Gan, Y.4
Rex, A.E.5
Viggiani, C.J.6
Tavaré, S.7
Aparicio, O.M.8
-
18
-
-
24644499002
-
Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats
-
Kobayashi T., Ganley A.R.D. Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats. Science 2005, 309:1581-1584.
-
(2005)
Science
, vol.309
, pp. 1581-1584
-
-
Kobayashi, T.1
Ganley, A.R.D.2
-
19
-
-
0030133624
-
A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities
-
Kobayashi T., Horiuchi T. A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities. Genes Cells 1996, 1:465-474.
-
(1996)
Genes Cells
, vol.1
, pp. 465-474
-
-
Kobayashi, T.1
Horiuchi, T.2
-
20
-
-
84875976775
-
A natural polymorphism in rDNA replication origins links origin activation with calorie restriction and lifespan
-
Kwan E.X., Foss E.J., Tsuchiyama S., Alvino G.M., Kruglyak L., Kaeberlein M., Raghuraman M.K., Brewer B.J., Kennedy B.K., Bedalov A. A natural polymorphism in rDNA replication origins links origin activation with calorie restriction and lifespan. PLoS Genet. 2013, 9:e1003329.
-
(2013)
PLoS Genet.
, vol.9
-
-
Kwan, E.X.1
Foss, E.J.2
Tsuchiyama, S.3
Alvino, G.M.4
Kruglyak, L.5
Kaeberlein, M.6
Raghuraman, M.K.7
Brewer, B.J.8
Kennedy, B.K.9
Bedalov, A.10
-
21
-
-
0030804309
-
The novel DNA damage checkpoint protein ddc1p is phosphorylated periodically during the cell cycle and in response to DNA damage in budding yeast
-
Longhese M.P., Paciotti V., Fraschini R., Zaccarini R., Plevani P., Lucchini G. The novel DNA damage checkpoint protein ddc1p is phosphorylated periodically during the cell cycle and in response to DNA damage in budding yeast. EMBO J. 1997, 16:5216-5226.
-
(1997)
EMBO J.
, vol.16
, pp. 5216-5226
-
-
Longhese, M.P.1
Paciotti, V.2
Fraschini, R.3
Zaccarini, R.4
Plevani, P.5
Lucchini, G.6
-
22
-
-
82455164158
-
Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast
-
Mantiero D., Mackenzie A., Donaldson A., Zegerman P. Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast. EMBO J. 2011, 30:4805-4814.
-
(2011)
EMBO J.
, vol.30
, pp. 4805-4814
-
-
Mantiero, D.1
Mackenzie, A.2
Donaldson, A.3
Zegerman, P.4
-
23
-
-
77953632048
-
Eukaryotic chromosome DNA replication: where, when, and how?
-
Masai H., Matsumoto S., You Z., Yoshizawa-Sugata N., Oda M. Eukaryotic chromosome DNA replication: where, when, and how?. Annu. Rev. Biochem. 2010, 79:89-130.
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 89-130
-
-
Masai, H.1
Matsumoto, S.2
You, Z.3
Yoshizawa-Sugata, N.4
Oda, M.5
-
24
-
-
84877815977
-
Genetic and epigenetic determinants of DNA replication origins, position and activation
-
Méchali M., Yoshida K., Coulombe P., Pasero P. Genetic and epigenetic determinants of DNA replication origins, position and activation. Curr. Opin. Genet. Dev. 2013, 23:124-131.
-
(2013)
Curr. Opin. Genet. Dev.
, vol.23
, pp. 124-131
-
-
Méchali, M.1
Yoshida, K.2
Coulombe, P.3
Pasero, P.4
-
25
-
-
0033634725
-
Replication of yeast rDNA initiates downstream of transcriptionally active genes
-
Muller M., Lucchini R., Sogo J.M. Replication of yeast rDNA initiates downstream of transcriptionally active genes. Mol. Cell 2000, 5:767-777.
-
(2000)
Mol. Cell
, vol.5
, pp. 767-777
-
-
Muller, M.1
Lucchini, R.2
Sogo, J.M.3
-
26
-
-
33746101049
-
Genome-wide identification of replication origins in yeast by comparative genomics
-
Nieduszynski C.A., Knox Y., Donaldson A.D. Genome-wide identification of replication origins in yeast by comparative genomics. Genes Dev. 2006, 20:1874-1879.
-
(2006)
Genes Dev.
, vol.20
, pp. 1874-1879
-
-
Nieduszynski, C.A.1
Knox, Y.2
Donaldson, A.D.3
-
27
-
-
1842682915
-
The NAD(+)-dependent Sir2p histone deacetylase is a negative regulator of chromosomal DNA replication
-
Pappas D.L., Frisch R., Weinreich M. The NAD(+)-dependent Sir2p histone deacetylase is a negative regulator of chromosomal DNA replication. Genes Dev. 2004, 18:769-781.
-
(2004)
Genes Dev.
, vol.18
, pp. 769-781
-
-
Pappas, D.L.1
Frisch, R.2
Weinreich, M.3
-
28
-
-
0036791653
-
Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus
-
Pasero P., Bensimon A., Schwob E. Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus. Genes Dev. 2002, 16:2479-2484.
-
(2002)
Genes Dev.
, vol.16
, pp. 2479-2484
-
-
Pasero, P.1
Bensimon, A.2
Schwob, E.3
-
29
-
-
84857060479
-
DNTP pools determine fork progression and origin usage under replication stress
-
Poli J., Tsaponina O., Crabbé L., Keszthelyi A., Pantesco V., Chabes A., Lengronne A., Pasero P. dNTP pools determine fork progression and origin usage under replication stress. EMBO J. 2012, 31:883-894.
-
(2012)
EMBO J.
, vol.31
, pp. 883-894
-
-
Poli, J.1
Tsaponina, O.2
Crabbé, L.3
Keszthelyi, A.4
Pantesco, V.5
Chabes, A.6
Lengronne, A.7
Pasero, P.8
-
30
-
-
79959803077
-
Patterns and mechanisms of ancestral histone protein inheritance in budding yeast
-
Radman-Livaja M., Verzijlbergen K.F., Weiner A., van Welsem T., Friedman N., Rando O.J., van Leeuwen F. Patterns and mechanisms of ancestral histone protein inheritance in budding yeast. PLoS Biol. 2011, 9:e1001075.
-
(2011)
PLoS Biol.
, vol.9
-
-
Radman-Livaja, M.1
Verzijlbergen, K.F.2
Weiner, A.3
van Welsem, T.4
Friedman, N.5
Rando, O.J.6
van Leeuwen, F.7
-
31
-
-
77956034122
-
Genome-wide mapping of nucleosomes in yeast
-
Rando O.J. Genome-wide mapping of nucleosomes in yeast. Methods Enzymol. 2010, 470:105-118.
-
(2010)
Methods Enzymol.
, vol.470
, pp. 105-118
-
-
Rando, O.J.1
-
32
-
-
79952270884
-
HDACs link the DNA damage response, processing of double-strand breaks and autophagy
-
Robert T., Vanoli F., Chiolo I., Shubassi G., Bernstein K.A., Rothstein R., Botrugno O.A., Parazzoli D., Oldani A., Minucci S., Foiani M. HDACs link the DNA damage response, processing of double-strand breaks and autophagy. Nature 2011, 471:74-79.
-
(2011)
Nature
, vol.471
, pp. 74-79
-
-
Robert, T.1
Vanoli, F.2
Chiolo, I.3
Shubassi, G.4
Bernstein, K.A.5
Rothstein, R.6
Botrugno, O.A.7
Parazzoli, D.8
Oldani, A.9
Minucci, S.10
Foiani, M.11
-
33
-
-
0032497529
-
A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication
-
Santocanale C., Diffley J.F. A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication. Nature 1998, 395:615-618.
-
(1998)
Nature
, vol.395
, pp. 615-618
-
-
Santocanale, C.1
Diffley, J.F.2
-
34
-
-
0032497548
-
Regulation of DNA-replication origins during cell-cycle progression
-
Shirahige K., Hori Y., Shiraishi K., Yamashita M., Takahashi K., Obuse C., Tsurimoto T., Yoshikawa H. Regulation of DNA-replication origins during cell-cycle progression. Nature 1998, 395:618-621.
-
(1998)
Nature
, vol.395
, pp. 618-621
-
-
Shirahige, K.1
Hori, Y.2
Shiraishi, K.3
Yamashita, M.4
Takahashi, K.5
Obuse, C.6
Tsurimoto, T.7
Yoshikawa, H.8
-
35
-
-
0031056907
-
An unusual form of transcriptional silencing in yeast ribosomal DNA
-
Smith J.S., Boeke J.D. An unusual form of transcriptional silencing in yeast ribosomal DNA. Genes Dev. 1997, 11:241-254.
-
(1997)
Genes Dev.
, vol.11
, pp. 241-254
-
-
Smith, J.S.1
Boeke, J.D.2
-
36
-
-
0032915376
-
A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors
-
Smith J.S., Caputo E., Boeke J.D. A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors. Mol. Cell. Biol. 1999, 19:3184-3197.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 3184-3197
-
-
Smith, J.S.1
Caputo, E.2
Boeke, J.D.3
-
37
-
-
84878538398
-
Cdc45 is a critical effector of myc-dependent DNA replication stress
-
Srinivasan S.V., Dominguez-Sola D., Wang L.C., Hyrien O., Gautier J. Cdc45 is a critical effector of myc-dependent DNA replication stress. Cell Rep. 2013, 3:1629-1639.
-
(2013)
Cell Rep.
, vol.3
, pp. 1629-1639
-
-
Srinivasan, S.V.1
Dominguez-Sola, D.2
Wang, L.C.3
Hyrien, O.4
Gautier, J.5
-
38
-
-
84155171119
-
Origin association of Sld3, Sld7, and Cdc45 proteins is a key step for determination of origin-firing timing
-
Tanaka S., Nakato R., Katou Y., Shirahige K., Araki H. Origin association of Sld3, Sld7, and Cdc45 proteins is a key step for determination of origin-firing timing. Curr. Biol. 2011, 21:2055-2063.
-
(2011)
Curr. Biol.
, vol.21
, pp. 2055-2063
-
-
Tanaka, S.1
Nakato, R.2
Katou, Y.3
Shirahige, K.4
Araki, H.5
-
39
-
-
0036863542
-
Histone acetylation regulates the time of replication origin firing
-
Vogelauer M., Rubbi L., Lucas I., Brewer B.J., Grunstein M. Histone acetylation regulates the time of replication origin firing. Mol. Cell 2002, 10:1223-1233.
-
(2002)
Mol. Cell
, vol.10
, pp. 1223-1233
-
-
Vogelauer, M.1
Rubbi, L.2
Lucas, I.3
Brewer, B.J.4
Grunstein, M.5
-
40
-
-
56749105947
-
Control of replication initiation by the Sum1/Rfm1/Hst1 histone deacetylase
-
Weber J.M., Irlbacher H., Ehrenhofer-Murray A.E. Control of replication initiation by the Sum1/Rfm1/Hst1 histone deacetylase. BMC Mol. Biol. 2008, 9:100.
-
(2008)
BMC Mol. Biol.
, vol.9
, pp. 100
-
-
Weber, J.M.1
Irlbacher, H.2
Ehrenhofer-Murray, A.E.3
-
41
-
-
79952303535
-
Cdc45 limits replicon usage from a low density of preRCs in mammalian cells
-
Wong P.G., Winter S.L., Zaika E., Cao T.V., Oguz U., Koomen J.M., Hamlin J.L., Alexandrow M.G. Cdc45 limits replicon usage from a low density of preRCs in mammalian cells. PLoS ONE 2011, 6:e17533.
-
(2011)
PLoS ONE
, vol.6
-
-
Wong, P.G.1
Winter, S.L.2
Zaika, E.3
Cao, T.V.4
Oguz, U.5
Koomen, J.M.6
Hamlin, J.L.7
Alexandrow, M.G.8
-
42
-
-
0036668464
-
Mapping of early firing origins on a replication profile of budding yeast
-
Yabuki N., Terashima H., Kitada K. Mapping of early firing origins on a replication profile of budding yeast. Genes Cells 2002, 7:781-789.
-
(2002)
Genes Cells
, vol.7
, pp. 781-789
-
-
Yabuki, N.1
Terashima, H.2
Kitada, K.3
-
43
-
-
39749127166
-
The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men
-
Yang X.-J., Seto E. The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men. Nat. Rev. Mol. Cell Biol. 2008, 9:206-218.
-
(2008)
Nat. Rev. Mol. Cell Biol.
, vol.9
, pp. 206-218
-
-
Yang, X.-J.1
Seto, E.2
|