Association analysis of colorectal cancer susceptibility variants with gastric cancer in a Chinese Han population

Genetics and Molecular Research

Volumn 13, Issue 2, 2014, Pages 3673-3680

  Zhou, C P ^a   Pan, H Z ^b   Li, F X ^a   Hu, N Y ^c   Li, M ^a   Yang, X X ^a  

^a SOUTHERN MEDICAL UNIVERSITY   (China)

^b QINGDAO UNIVERSITY   (China)

^c NANCHANG UNIVERSITY   (China)

Author keywords

Colorectal cancer; Gastric cancer; Single nucleotide polymorphism; Susceptibility

Indexed keywords

CYTOSINE; GUANINE; THYMINE;

ADULT; ANALYTICAL EQUIPMENT; ARTICLE; CANCER RISK; CASE CONTROL STUDY; CHINESE; COLORECTAL CANCER; CONTROLLED STUDY; FEMALE; GENETIC ASSOCIATION; GENETIC SELECTION; GENETIC SUSCEPTIBILITY; GENETIC VARIABILITY; GENOTYPE; HUMAN; MAJOR CLINICAL STUDY; MALE; POPULATION RESEARCH; SEX DIFFERENCE; SINGLE NUCLEOTIDE POLYMORPHISM; STOMACH CANCER; AGED; COLORECTAL TUMOR; GENETIC PREDISPOSITION; GENETICS; MIDDLE AGED; PATHOLOGY; RISK FACTOR; SEXUAL DEVELOPMENT; STOMACH TUMOR;

ADULT; AGED; CASE-CONTROL STUDIES; COLORECTAL NEOPLASMS; FEMALE; GENETIC ASSOCIATION STUDIES; GENETIC PREDISPOSITION TO DISEASE; HUMANS; MALE; MIDDLE AGED; POLYMORPHISM, SINGLE NUCLEOTIDE; RISK FACTORS; SEX CHARACTERISTICS; STOMACH NEOPLASMS;

EID: 84900453386     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2014.May.9.10     Document Type: Article

References (38)

1. Abnet CC, Freedman ND, Hu N, Wang Z, et al. (2010). A shared susceptibility locus in PLCE1 at 10q23 for gastric adenocarcinoma and esophageal squamous cell carcinoma. Nat. Genet. 42: 764-767.
2. Beuten J, Gelfond JA, Martinez-Fierro ML, Weldon KS, et al. (2009). Association of chromosome 8q variants with prostate cancer risk in Caucasian and Hispanic men. Carcinogenesis 30: 1372-1379.
3. Crew KD and Neugut AI (2006). Epidemiology of gastric cancer. World J. Gastroenterol. 12: 354-362.
4. Crowther-Swanepoel D, Broderick P, Di Bernardo MC, Dobbins SE, et al. (2010). Common variants at 2q37.3, 8q24.21, 15q21.3 and 16q24.1 influence chronic lymphocytic leukemia risk. Nat. Genet. 42: 132-136.
5. Easton DF, Pooley KA, Dunning AM, Pharoah PD, et al. (2007). Genome-wide association study identifies novel breast cancer susceptibility loci. Nature 447: 1087-1093.
6. Enciso-Mora V, Broderick P, Ma Y, Jarrett RF, et al. (2010). A genome-wide association study of Hodgkin's lymphoma identifies new susceptibility loci at 2p16.1 (REL), 8q24.21 and 10p14 (GATA3). Nat. Genet. 42: 1126-1130.
7. Epplein M, Nomura AM, Hankin JH, Blaser MJ, et al. (2008). Association of Helicobacter pylori infection and diet on the risk of gastric cancer: a case-control study in Hawaii. Cancer Causes Control 19: 869-877.
8. Fletcher O, Johnson N, Gibson L, Coupland B, et al. (2008). Association of genetic variants at 8q24 with breast cancer risk. Cancer Epidemiol. Biomarkers Prev. 17: 702-705.
9. Fletcher O, Johnson N, Orr N, Hosking FJ, et al. (2011). Novel breast cancer susceptibility locus at 9q31.2: results of a genome-wide association study. J. Natl. Cancer Inst. 103: 425-435.
10. Ghoussaini M, Song H, Koessler T, Al Olama AA, et al. (2008). Multiple loci with different cancer specificities within the 8q24 gene desert. J. Natl. Cancer Inst. 100: 962-966.
11. González CA, Sala N and Capella G (2002). Genetic susceptibility and gastric cancer risk. Int. J. Cancer 100: 249-260.
12. Goode EL, Chenevix-Trench G, Song H, Ramus SJ, et al. (2010). A genome-wide association study identifies susceptibility loci for ovarian cancer at 2q31 and 8q24. Nat. Genet. 42: 874-879.
13. Guo Y, Fang J, Liu Y, Sheng HH, et al. (2011). Association between polymorphism rs6983267 and gastric cancer risk in Chinese population. World J. Gastroenterol. 17: 1759-1765.
14. He J, Wilkens LR, Stram DO, Kolonel LN, et al. (2011). Generalizability and epidemiologic characterization of eleven colorectal cancer GWAS hits in multiple populations. Cancer Epidemiol. Biomarkers Prev. 20: 70-81.
15. Houlston RS, Webb E, Broderick P, Pittman AM, et al. (2008). Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer. Nat. Genet. 40: 1426-1435.
16. Kiemeney LA, Thorlacius S, Sulem P, Geller F, et al. (2008). Sequence variant on 8q24 confers susceptibility to urinary bladder cancer. Nat. Genet. 40: 1307-1312.
17. Ladeiras-Lopes R, Pereira AK, Nogueira A, Pinheiro-Torres T, et al. (2008). Smoking and gastric cancer: systematic review and meta-analysis of cohort studies. Cancer Causes Control 19: 689-701.
18. Lascorz J, Forsti A, Chen B, Buch S, et al. (2010). Genome-wide association study for colorectal cancer identifies risk polymorphisms in German familial cases and implicates MAPK signalling pathways in disease susceptibility. Carcinogenesis 31: 1612-1619.
19. Li FX, Yang XX, He XQ, Hu NY, et al. (2012). Association of 10q23 with colorectal cancer in a Chinese population. Mol. Biol. Rep. 39: 9557-9562.
20. Li X, Yang XX, Hu NY, Sun JZ, et al. (2011). A risk-associated single nucleotide polymorphism of SMAD7 is common to colorectal, gastric, and lung cancers in a Han Chinese population. Mol. Biol. Rep. 38: 5093-5097.
21. Lochhead P, Ng MT, Hold GL, Rabkin CS, et al. (2011). Possible association between a genetic polymorphism at 8q24 and risk of upper gastrointestinal cancer. Eur. J. Cancer Prev. 20: 54-57.
22. Lubbe SJ, Pittman AM, Olver B, Lloyd A, et al. (2012). The 14q22.2 colorectal cancer variant rs4444235 shows cis-acting regulation of BMP4. Oncogene 31: 3777-3784.
23. Pomerantz MM, Ahmadiyeh N, Jia L, Herman P, et al. (2009). The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer. Nat. Genet. 41: 882-884.
24. Prokunina-Olsson L and Hall JL (2009). No effect of cancer-associated SNP rs6983267 in the 8q24 region on co-expression of MYC and TCF7L2 in normal colon tissue. Mol. Cancer 8: 96.
25. Rothman N, Garcia-Closas M, Chatterjee N, Malats N, et al. (2010). A multi-stage genome-wide association study of bladder cancer identifies multiple susceptibility loci. Nat. Genet. 42: 978-984.
26. Schumacher FR, Berndt SI, Siddiq A, Jacobs KB, et al. (2011). Genome-wide association study identifies new prostate cancer susceptibility loci. Hum. Mol. Genet. 20: 3867-3875.
27. Shete S, Hosking FJ, Robertson LB, Dobbins SE, et al. (2009). Genome-wide association study identifies five susceptibility loci for glioma. Nat. Genet. 41: 899-904.
28. Solé X, Guino E, Valls J, Iniesta R, et al. (2006). SNPStats: a web tool for the analysis of association studies. Bioinformatics 22: 1928-1929.
29. Takata R, Akamatsu S, Kubo M, Takahashi A, et al. (2010). Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population. Nat. Genet. 42: 751-754.
30. Tan IB, Ng I, Tai WM and Tan P (2012). Understanding the genetic basis of gastric cancer: recent advances. Expert. Rev. Gastroenterol. Hepatol. 6: 335-341.
31. Tenesa A, Farrington SM, Prendergast JG, Porteous ME, et al. (2008). Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21. Nat. Genet. 40: 631-637.
32. Tomlinson I, Webb E, Carvajal-Carmona L, Broderick P, et al. (2007). A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21. Nat. Genet. 39: 984-988.
33. Tomlinson IP, Webb E, Carvajal-Carmona L, Broderick P, et al. (2008). A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3. Nat. Genet. 40: 623-630.
34. Turnbull C, Ahmed S, Morrison J, Pernet D, et al. (2010). Genome-wide association study identifies five new breast cancer susceptibility loci. Nat. Genet. 42: 504-507.
35. Wasserman NF, Aneas I and Nobrega MA (2010). An 8q24 gene desert variant associated with prostate cancer risk confers differential in vivo activity to a MYC enhancer. Genome Res. 20: 1191-1197.
36. White KL, Sellers TA, Fridley BL, Vierkant RA, et al. (2010). Variation at 8q24 and 9p24 and risk of epithelial ovarian cancer. Twin. Res. Hum. Genet. 13: 43-56.
37. Xing J, Myers RE, He X, Qu F, et al. (2011). GWAS-identified colorectal cancer susceptibility locus associates with disease prognosis. Eur. J. Cancer 47: 1699-1707.
38. Zanke BW, Greenwood CM, Rangrej J, Kustra R, et al. (2007). Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24. Nat. Genet. 39: 989-994.