Protein-specific prediction of mRNA binding using RNA sequences, binding motifs and predicted secondary structures

BMC Bioinformatics

Volumn 15, Issue 1, 2014, Pages

  Livi, Carmen M ^a,b,c   Blanzieri, Enrico ^a  

^a UNIVERSITY OF TRENTO   (Italy)

^b CENTRE FOR GENOMIC REGULATION CRG   (Spain)

^c UNIVERSITAT POMPEU FABRA   (Spain)

Author keywords

RNA protein interaction; Support vector machine

Indexed keywords

BINDING ENERGY; EXPERIMENTS; FORECASTING; RNA; SUPPORT VECTOR MACHINES;

BINDING INTERACTION; DISCRIMINATIVE FEATURES; PRIMARY SEQUENCES; PROTEIN-RNA INTERACTION; RNA-BINDING PROTEIN; RNA-PROTEIN INTERACTIONS; SECONDARY STRUCTURES; SOURCES OF INFORMATIONS;

PROTEINS;

MESSENGER RNA; RNA BINDING PROTEIN;

ARTICLE; CHEMISTRY; COMPUTER SIMULATION; CONFORMATION; HUMAN; METABOLISM; SEQUENCE ANALYSIS; SUPPORT VECTOR MACHINE;

COMPUTER SIMULATION; HUMANS; NUCLEIC ACID CONFORMATION; RNA, MESSENGER; RNA-BINDING PROTEINS; SEQUENCE ANALYSIS, RNA; SUPPORT VECTOR MACHINES;

EID: 84900394210     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-15-123     Document Type: Article

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