Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure

RNA

Volumn 16, Issue 6, 2010, Pages 1096-1107

  Li, Xiao ^a   Quon, Gerald ^b   Lipshitz, Howard D ^a,c   Morris, Quaid ^a,b  

^a UNIVERSITY OF TORONTO   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

^c HOSPITAL FOR SICK CHILDREN RESEARCH INSTITUTE   (Canada)

Author keywords

Accessibility; Cis element; Gene regulation; Post transcriptional regulation; RNA binding protein; Secondary structure

Indexed keywords

MESSENGER RNA; PUF3P PROTEIN; PUMILIO PROTEIN; RNA BINDING PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; GENE REGULATORY NETWORK; GENETIC TRANSCRIPTION; HUMAN; IN VIVO STUDY; NONHUMAN; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; RNA SEQUENCE; RNA STABILITY; RNA STRUCTURE; SELF EVALUATION;

3' UNTRANSLATED REGIONS; ANIMALS; BINDING SITES; CONSENSUS SEQUENCE; CONSERVED SEQUENCE; DINUCLEOTIDE REPEATS; DROSOPHILA; DROSOPHILA PROTEINS; HUMANS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PREDICTIVE VALUE OF TESTS; RNA, MESSENGER; RNA-BINDING PROTEINS; TRANSCRIPTION, GENETIC;

EID: 77952687104     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.2017210     Document Type: Article

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