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Volumn , Issue , 2005, Pages 173-194

Methodological issues and experimental design considerations in metabolic profile-based classifications

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EID: 84900267440     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/0-387-25240-1_11     Document Type: Chapter
Times cited : (2)

References (40)
  • 1
    • 0026554440 scopus 로고
    • Kynurenic acid concentrations are reduced in Huntington's disease cerebral cortex
    • Beal MF et al. Kynurenic acid concentrations are reduced in Huntington's disease cerebral cortex. J. Neurol. Sci., 108:80-87 (1992).
    • (1992) J. Neurol. Sci. , vol.108 , pp. 80-87
    • Beal, M.F.1
  • 2
    • 0024426550 scopus 로고
    • Analysis of effect of age on synthesis of specific proteins by hepatocytes
    • Butler JA, Heydari AR and Richardson A. Analysis of effect of age on synthesis of specific proteins by hepatocytes. J. Cell Physiol., 141:400-409 (1989).
    • (1989) J. Cell Physiol. , vol.141 , pp. 400-409
    • Butler, J.A.1    Heydari, A.R.2    Richardson, A.3
  • 3
    • 0037464510 scopus 로고    scopus 로고
    • Overweight, obesity, and mortality from cancer in a prospectively studied cohort of U. S. adults
    • Calle EE et al. Overweight, obesity, and mortality from cancer in a prospectively studied cohort of U. S. adults. N. Engl. J. Med., 348:1625-1638 (2003).
    • (2003) N. Engl. J. Med. , vol.348 , pp. 1625-1638
    • Calle, E.E.1
  • 4
    • 84926662675 scopus 로고
    • Nearest neighbor pattern classification
    • Cover T and Hart P. Nearest neighbor pattern classification. IEEE Trans Information Theory, 13:21-27 (1967)
    • (1967) IEEE Trans Information Theory , vol.13 , pp. 21-27
    • Cover, T.1    Hart, P.2
  • 5
    • 0036269481 scopus 로고    scopus 로고
    • Rapid and quantitative detection of the microbial spoilage of meat using FT-1R spectroscopy and machine learning
    • Ellis DI, Broadhurst D, Kell DB, Rowland JJ and Goodacre R. Rapid and quantitative detection of the microbial spoilage of meat using FT-1R spectroscopy and machine learning. Appl. Environ. Microbiol., 68:2822-2828 (2002)
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2822-2828
    • Ellis, D.I.1    Broadhurst, D.2    Kell, D.B.3    Rowland, J.J.4    Goodacre, R.5
  • 6
    • 0034634448 scopus 로고    scopus 로고
    • An NMR-based metabonomic approach to investigate the biochemical consequences of genetic strain differences: Application to the C57BL10J and Alpk: ApfCD mouse
    • Gavaghan CL, Holmes E, Lenz E, Wilson ID, Nicholson JK. An NMR-based metabonomic approach to investigate the biochemical consequences of genetic strain differences: application to the C57BL10J and Alpk: ApfCD mouse. FEBS Lett., 484:169-174 (2000)
    • (2000) FEBS Lett. , vol.484 , pp. 169-174
    • Gavaghan, C.L.1    Holmes, E.2    Lenz, E.3    Wilson, I.D.4    Nicholson, J.K.5
  • 7
    • 0033743932 scopus 로고    scopus 로고
    • NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole (Clethrionomys glareolus), wood mouse (podemus sylvaticus), white-toothed shrew (Crocidura suaveolus) and the laboratory rat. Comp
    • Griffin JL et al. NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole (Clethrionomys glareolus), wood mouse (podemus sylvaticus), white-toothed shrew (Crocidura suaveolus) and the laboratory rat. Comp. Biochem. Physiol. Pt B, 127:357-367 (2000).
    • (2000) Biochem. Physiol. Pt B , vol.127 , pp. 357-367
    • Griffin, J.L.1
  • 8
    • 0024352990 scopus 로고
    • Age-related changes in protein phosphorylation by rat hepatocytes, Mech
    • Heydari AR et al. Age-related changes in protein phosphorylation by rat hepatocytes, Mech. Ageing Dev., 50:227-248 (1989).
    • (1989) Ageing Dev. , vol.50 , pp. 227-248
    • Heydari, A.R.1
  • 9
    • 1842430981 scopus 로고    scopus 로고
    • Ultra-violet resonance Raman spectroscopy for the rapid discrimination of urinary tract infection bacteria
    • Jarvis RM and Goodacre R. Ultra-violet resonance Raman spectroscopy for the rapid discrimination of urinary tract infection bacteria. FEMS Microbiol. Lett., 232:127-132 (2004).
    • (2004) FEMS Microbiol. Lett. , vol.232 , pp. 127-132
    • Jarvis, R.M.1    Goodacre, R.2
  • 10
    • 2442651602 scopus 로고    scopus 로고
    • Geometric trajectory analysis of metabolic responses to toxicity can define treatment specific profiles
    • Keun HC. Geometric trajectory analysis of metabolic responses to toxicity can define treatment specific profiles. Chem. Res. Toxicol., 17:579-587 (2004).
    • (2004) Chem. Res. Toxicol. , vol.17 , pp. 579-587
    • Keun, H.C.1
  • 11
    • 0002214345 scopus 로고
    • Aging and its modulation by dietary restriction
    • 1st ed. Edited by B. P. Yu. Boca Raton: CRC press, Inc
    • Kristal BS and Yu BP. Aging and its modulation by dietary restriction. In Modulation of aging processes by dietary restriction. 1st ed. Edited by B. P. Yu. Boca Raton: CRC press, Inc (1994).
    • (1994) Modulation of Aging Processes by Dietary Restriction
    • Kristal, B.S.1    Yu, B.P.2
  • 12
    • 0033610079 scopus 로고    scopus 로고
    • Gene expression profile of aging and its retardation by caloric restriction
    • Lee CK et al. Gene expression profile of aging and its retardation by caloric restriction. Science, 285:1390-1393 (1999).
    • (1999) Science , vol.285 , pp. 1390-1393
    • Lee, C.K.1
  • 13
    • 0026491108 scopus 로고
    • Markers of dopamine metabolism in Parkinson's disease: The Parkinson's Study Group
    • Le Witt PA et al. Markers of dopamine metabolism in Parkinson's disease: The Parkinson's Study Group. Neurology, 42:2111-2117 (1992).
    • (1992) Neurology , vol.42 , pp. 2111-2117
    • Le Witt, P.A.1
  • 14
    • 0037444362 scopus 로고    scopus 로고
    • Contemporary issues in toxicology the role of metabonomics in toxicology and its evaluation by the COMET project
    • Lindon JC. et al. Contemporary issues in toxicology the role of metabonomics in toxicology and its evaluation by the COMET project. Toxicol. Appl. Pharmacol, 187:137-146 (2003).
    • (2003) Toxicol. Appl. Pharmacol , vol.187 , pp. 137-146
    • Lindon, J.C.1
  • 15
    • 0842348800 scopus 로고    scopus 로고
    • Characterization of microorganisms using UV resonance Raman spectroscopy and chemometrics
    • Lopez-Diez EC and Goodacre R. Characterization of microorganisms using UV resonance Raman spectroscopy and chemometrics. Anal. Chem., 76:585-591 (2004).
    • (2004) Anal. Chem. , vol.76 , pp. 585-591
    • Lopez-Diez, E.C.1    Goodacre, R.2
  • 16
    • 0001305251 scopus 로고
    • Generating and controlling multiparameter databases for biochemical correlates of disorders
    • New York: Plenum
    • Matson WR et al. Generating and controlling multiparameter databases for biochemical correlates of disorders. In Basic, clinical and therapeutic aspects of Alzheimer's and Parkinson's diseases. Vol. Volume II. New York: Plenum (1990).
    • (1990) Basic, Clinical and Therapeutic Aspects of Alzheimer's and Parkinson's Diseases , vol.2
    • Matson, W.R.1
  • 17
    • 0023217188 scopus 로고
    • EC array sensor concepts and data
    • Matson WR et al. EC array sensor concepts and data. Life Sci., 41:905-908 (1987).
    • (1987) Life Sci. , vol.41 , pp. 905-908
    • Matson, W.R.1
  • 18
    • 0021712038 scopus 로고
    • N-electrode three dimensional liquid chromatography with electrochemical detection for determination of neurotransmitters
    • Matson WR et al. n-electrode three dimensional liquid chromatography with electrochemical detection for determination of neurotransmitters. Clin. Chem., 30:1477-1488 (1984).
    • (1984) Clin. Chem. , vol.30 , pp. 1477-1488
    • Matson, W.R.1
  • 19
    • 0003062933 scopus 로고
    • Cellulose in the diets of rats and mice
    • McCay CM. Cellulose in the diets of rats and mice. J. Nutr., 10:435-447 (1935).
    • (1935) J. Nutr. , vol.10 , pp. 435-447
    • McCay, C.M.1
  • 20
    • 0002458132 scopus 로고
    • The effect of retarded growth upon the length of lifespan and upon the ultimate body size
    • McCay CM, Crowell MF and Maynard LA. The effect of retarded growth upon the length of lifespan and upon the ultimate body size. J. Nutr., 10:63-79 (1935).
    • (1935) J. Nutr. , vol.10 , pp. 63-79
    • McCay, C.M.1    Crowell, M.F.2    Maynard, L.A.3
  • 21
    • 0026671306 scopus 로고
    • Kynurenine pathway abnormalities in Parkinson's disease
    • Ogawa T et al. Kynurenine pathway abnormalities in Parkinson's disease. Neurology, 42:1702-1706 (1992).
    • (1992) Neurology , vol.42 , pp. 1702-1706
    • Ogawa, T.1
  • 22
    • 7044249739 scopus 로고    scopus 로고
    • Development of biomarkers based on diet-dependent metabolic serotypes: Concerns and approaches for cohort and gender issues in serum metabolome studies
    • Paolucci U et al. Development of biomarkers based on diet-dependent metabolic serotypes: Concerns and approaches for cohort and gender issues in serum metabolome studies. OMICS J. Integr. Biol., 8:209-220, (2004a).
    • (2004) OMICS J. Integr. Biol. , vol.8 , pp. 209-220
    • Paolucci, U.1
  • 23
    • 7044222525 scopus 로고    scopus 로고
    • Development of biomarkers based on diet-dependent metabolic serotypes: Characteristics of component-based models of metabolic serotype
    • Paolucci U et al. Development of biomarkers based on diet-dependent metabolic serotypes: Characteristics of component-based models of metabolic serotype. OMICS J. Integr. Biol, 8:221-238 (2004b).
    • (2004) OMICS J. Integr. Biol , vol.8 , pp. 221-238
    • Paolucci, U.1
  • 24
    • 0027232319 scopus 로고
    • The parsimony principle applied to multivariate calibration
    • Seasholtz MB and Kowalski B. The parsimony principle applied to multivariate calibration. Anal. Chim. Acta, 277:165-177 (1993)
    • (1993) Anal. Chim. Acta , vol.277 , pp. 165-177
    • Seasholtz, M.B.1    Kowalski, B.2
  • 25
    • 7044229934 scopus 로고    scopus 로고
    • Development of biomarkers based on diet-dependent metabolic serotypes: Practical issues in development of expert system-based classification models in metabolomic studies
    • Shi H et al. Development of biomarkers based on diet-dependent metabolic serotypes: Practical issues in development of expert system-based classification models in metabolomic studies. OMICSJ. Integr. Biol, 8:197-208, (2004).
    • (2004) OMICSJ. Integr. Biol , vol.8 , pp. 197-208
    • Shi, H.1
  • 26
    • 0037086012 scopus 로고    scopus 로고
    • Attention to relative response across sequential electrodes improves quantitation of coulometric array
    • Shi H et al. Attention to relative response across sequential electrodes improves quantitation of coulometric array. Anal Biochem., 302:239-245 (2002a).
    • (2002) Anal Biochem. , vol.302 , pp. 239-245
    • Shi, H.1
  • 27
    • 0036246743 scopus 로고    scopus 로고
    • Characterization of diet-dependent metabolic serotypes: Primary validation of male and female serotypes in independent cohorts of rats
    • Shi H et al. Characterization of diet-dependent metabolic serotypes: Primary validation of male and female serotypes in independent cohorts of rats. J. Nutr., 132:1039-1046 (2002b).
    • (2002) J. Nutr. , vol.132 , pp. 1039-1046
    • Shi, H.1
  • 28
    • 0036247585 scopus 로고    scopus 로고
    • Characterization of diet-dependent metabolic serotypes: Proof of principle in female and male rats
    • Shi H et al. Characterization of diet-dependent metabolic serotypes: Proof of principle in female and male rats. J. Nutr., 132:1031-1038 (2002c).
    • (2002) J. Nutr. , vol.132 , pp. 1031-1038
    • Shi, H.1
  • 29
    • 0002634522 scopus 로고
    • PLS discriminant plots
    • E. S. Gelsema and L. N. Kanal, Eds., Elsevier, Amsterdam
    • Sjostrom M, Wold S and Soderstrom B. PLS discriminant plots. In Pattern recognition in practice II. E. S. Gelsema and L. N. Kanal, Eds., Elsevier, Amsterdam, p. 486 (1986).
    • (1986) Pattern Recognition in Practice II , pp. 486
    • Sjostrom, M.1    Wold, S.2    Soderstrom, B.3
  • 30
    • 85164278893 scopus 로고
    • Partial least squares analysis with cross-validation for the two-class problem A Monte Carlo study
    • Stahle L and Wold S. Partial least squares analysis with cross-validation for the two-class problem A Monte Carlo study. J. Chemometrics, 1:185-196 (1987).
    • (1987) J. Chemometrics , vol.1 , pp. 185-196
    • Stahle, L.1    Wold, S.2
  • 32
    • 0035096044 scopus 로고    scopus 로고
    • Characterization of diet-dependent metabolic serotypes: Analytical and biological variability issues in rats
    • Vigneau-Callahan KE et al. Characterization of diet-dependent metabolic serotypes: analytical and biological variability issues in rats. J. Nutr., 131:924S-932S (2001).
    • (2001) J. Nutr. , vol.131
    • Vigneau-Callahan, K.E.1
  • 34
    • 0020044308 scopus 로고    scopus 로고
    • Dietary restriction in mice beginning at one year of age: Effects on life-span and spontaneous cancer incidence
    • Weindruch RH and Walford RL. Dietary restriction in mice beginning at one year of age: Effects on life-span and spontaneous cancer incidence. Science, 215:1415-1418 (2000).
    • (2000) Science , vol.215 , pp. 1415-1418
    • Weindruch, R.H.1    Walford, R.L.2
  • 35
    • 0035131928 scopus 로고    scopus 로고
    • Diet and cancer: One view at the start of the millennium
    • Willett WC. Diet and cancer: one view at the start of the millennium. Cancer Epidemiol. Biomark. Prev., 10:3-8 (2001).
    • (2001) Cancer Epidemiol. Biomark. Prev. , vol.10 , pp. 3-8
    • Willett, W.C.1
  • 37
    • 1242276354 scopus 로고    scopus 로고
    • The rapid identification of Acinetobacter species using Fourier transform infrared spectroscopy
    • Winder CL et al. The rapid identification of Acinetobacter species using Fourier transform infrared spectroscopy. J. Appl. Microbiol, 96:328-339 (2004).
    • (2004) J. Appl. Microbiol , vol.96 , pp. 328-339
    • Winder, C.L.1
  • 38
    • 0016973661 scopus 로고
    • Pattern Recognition by means of disjoint principal components models
    • Wold S. Pattern Recognition by means of disjoint principal components models. Pan. Recogn., 8:127-139 (1976)
    • (1976) Pan. Recogn. , vol.8 , pp. 127-139
    • Wold, S.1
  • 40
    • 0029759443 scopus 로고    scopus 로고
    • Aging, oxidative stress: Modulation by dietary restriction
    • Yu BP. Aging, oxidative stress: Modulation by dietary restriction. Free Radio. Biol. Med., 21:651-668 (1996).
    • (1996) Free Radio. Biol. Med. , vol.21 , pp. 651-668
    • Yu, B.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.