-
1
-
-
0020085937
-
Chromosomal locations of the genes for rRNA in Escherichia coli K-12
-
Ellwood, M. and Nomura, M. (1982) Chromosomal locations of the genes for rRNA in Escherichia coli K-12. J. Bacteriol.149, 458-468.
-
(1982)
J. Bacteriol.
, vol.149
, pp. 458-468
-
-
Ellwood, M.1
Nomura, M.2
-
2
-
-
0017729265
-
Genetics of bacterial ribosomes
-
Nomura, M., Morgan, E.A. and Jaskunas, S.R. (1977) Genetics of bacterial ribosomes. Annu. Rev. Genet.11, 297-347.
-
(1977)
Annu. Rev. Genet.
, vol.11
, pp. 297-347
-
-
Nomura, M.1
Morgan, E.A.2
Jaskunas, S.R.3
-
3
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
Warner, J.R. (1999) The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci.24, 437-440.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 437-440
-
-
Warner, J.R.1
-
5
-
-
0026193910
-
Mapping replication origins in yeast chromosomes
-
Brewer, B.J. and Fangman, W.L. (1988) Mapping replication origins in yeast chromosomes. Bioessays 13, 317-322.
-
(1988)
Bioessays
, vol.13
, pp. 317-322
-
-
Brewer, B.J.1
Fangman, W.L.2
-
6
-
-
79953171865
-
Analysis of DNA replication in Saccharomyces cerevisiaeby twodimensional and pulsed-field gel electrophoresis
-
Chapter 22, Unit 22.14
-
Ide, S. and Kobayashi, T. (2010) Analysis of DNA replication in Saccharomyces cerevisiaeby twodimensional and pulsed-field gel electrophoresis. Curr. Protoc. Cell Biol. Chapter 22, Unit 22.14.
-
(2010)
Curr. Protoc. Cell Biol.
-
-
Ide, S.1
Kobayashi, T.2
-
7
-
-
0029053229
-
Human ribosomal RNA gene cluster: identification of the proximal end containing a novel tandem repeat sequence
-
Sakai, M., Ohta, T., Minoshima, S., Kudoh, J., Wang, Y., de Jong, P.J. and Shimizu, N. (1995) Human ribosomal RNA gene cluster: identification of the proximal end containing a novel tandem repeat sequence. Genomics26, 521-526.
-
(1995)
Genomics
, vol.26
, pp. 521-526
-
-
Sakai, M.1
Ohta, T.2
Minoshima, S.3
Kudoh, J.4
Wang, Y.5
de Jong, P.J.6
Shimizu, N.7
-
8
-
-
0029067907
-
Complete sequence of 43-kb human ribosomal DNA repeat: Analysis of the intergenic spacer
-
Gonzalez, I.L. and Sylvester, J.E. (1995) Complete sequence of 43-kb human ribosomal DNA repeat: Analysis of the intergenic spacer. Genomics27, 320-328.
-
(1995)
Genomics
, vol.27
, pp. 320-328
-
-
Gonzalez, I.L.1
Sylvester, J.E.2
-
9
-
-
0032535478
-
Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I
-
Kobayashi, T., Heck, D.J., Nomura, M. and Horiuchi, T. (1998) Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I. Genes Dev.12, 3821-3830.
-
(1998)
Genes Dev.
, vol.12
, pp. 3821-3830
-
-
Kobayashi, T.1
Heck, D.J.2
Nomura, M.3
Horiuchi, T.4
-
10
-
-
0025719475
-
Activation of replication origins within yeast chromosomes
-
Fangman, W.L. and Brewer, B.J. (1991) Activation of replication origins within yeast chromosomes. Annu. Rev. Cell Biol.7, 375-402.
-
(1991)
Annu. Rev. Cell Biol.
, vol.7
, pp. 375-402
-
-
Fangman, W.L.1
Brewer, B.J.2
-
11
-
-
0036791653
-
Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus
-
Pasero, P., Bensimon, A. and Schow, E. (2002) Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus. Genes Dev.16, 2479-2484.
-
(2002)
Genes Dev.
, vol.16
, pp. 2479-2484
-
-
Pasero, P.1
Bensimon, A.2
Schow, E.3
-
12
-
-
80053329001
-
Initiation of chromosomal DNA replication in eukaryotic cells; contribution of yeast genetics to the elucidation
-
Araki, H. (2011) Initiation of chromosomal DNA replication in eukaryotic cells; contribution of yeast genetics to the elucidation. Genes Genet. Syst.86, 141-149.
-
(2011)
Genes Genet. Syst.
, vol.86
, pp. 141-149
-
-
Araki, H.1
-
13
-
-
0038046165
-
Transcription-dependent recombination and the role of fork collision in yeast rDNA
-
Takeuchi, Y., Horiuchi, T. and Kobayashi, T. (2003) Transcription-dependent recombination and the role of fork collision in yeast rDNA. Genes Dev.17, 1497-1506.
-
(2003)
Genes Dev.
, vol.17
, pp. 1497-1506
-
-
Takeuchi, Y.1
Horiuchi, T.2
Kobayashi, T.3
-
14
-
-
0037370054
-
In exponentially growing Saccharomyces cerevisiaecells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes
-
French, S.L., Osheim, Y.N., Cioci, F., Nomura, M. and Beyer, A.L. (2003) In exponentially growing Saccharomyces cerevisiaecells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes. Mol. Cell. Biol.23, 1558-1568.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 1558-1568
-
-
French, S.L.1
Osheim, Y.N.2
Cioci, F.3
Nomura, M.4
Beyer, A.L.5
-
15
-
-
76249101086
-
Abundance of ribosomal RNA gene copies maintains genome integrity
-
Ide, S., Miyazaki, T., Maki, H. and Kobayashi, T. (2010) Abundance of ribosomal RNA gene copies maintains genome integrity. Science327, 693-696.
-
(2010)
Science
, vol.327
, pp. 693-696
-
-
Ide, S.1
Miyazaki, T.2
Maki, H.3
Kobayashi, T.4
-
16
-
-
2342666131
-
SIR2regulates recombination between different rDNA repeats, but not recombination within individual rRNA genes in yeast
-
Kobayashi, T., Horiuchi, T., Tongaonkar, P., Vu, L. and Nomura, M. (2004)SIR2regulates recombination between different rDNA repeats, but not recombination within individual rRNA genes in yeast. Cell117, 441-453.
-
(2004)
Cell
, vol.117
, pp. 441-453
-
-
Kobayashi, T.1
Horiuchi, T.2
Tongaonkar, P.3
Vu, L.4
Nomura, M.5
-
17
-
-
4143102539
-
rDNA enhancer affects replication initiation and mitotic recombination: Fob1 mediates nucleolytic processing independently of replication
-
Burkhalter, M.D. and Sogo, J.M. (2004) rDNA enhancer affects replication initiation and mitotic recombination: Fob1 mediates nucleolytic processing independently of replication. Mol. Cell 15, 409-421.
-
(2004)
Mol. Cell
, vol.15
, pp. 409-421
-
-
Burkhalter, M.D.1
Sogo, J.M.2
-
18
-
-
84876820158
-
Rtt109 prevents hyper-amplification of ribosomal RNA genes through histone modification in budding yeast
-
Ide, S., Saka, K. and Kobayashi, T. (2013) Rtt109 prevents hyper-amplification of ribosomal RNA genes through histone modification in budding yeast. PLoS Genet.9, e1003410.
-
(2013)
PLoS Genet.
, vol.9
-
-
Ide, S.1
Saka, K.2
Kobayashi, T.3
-
19
-
-
0034749348
-
Identification of DNA cis-elements essential for expansion of ribosomal DNA repeats in Saccharomyces cerevisiae
-
Kobayashi, T., Nomura, M. and Horiuch, T. (2001) Identification of DNA cis-elements essential for expansion of ribosomal DNA repeats in Saccharomyces cerevisiae. Mol. Cell. Biol. 21, 136-147.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 136-147
-
-
Kobayashi, T.1
Nomura, M.2
Horiuch, T.3
-
20
-
-
24644499002
-
Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats
-
Kobayashi, T. and Ganley, A.R. (2005) Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats. Science309, 1581-1584.
-
(2005)
Science
, vol.309
, pp. 1581-1584
-
-
Kobayashi, T.1
Ganley, A.R.2
-
21
-
-
79953707188
-
Regulation of ribosomal RNA gene copy number and its role in modulating genome integrity and evolutionary adaptability in yeast
-
Kobayashi, T. (2011) Regulation of ribosomal RNA gene copy number and its role in modulating genome integrity and evolutionary adaptability in yeast. Cell. Mol. Life Sci.64, 1395-1403.
-
(2011)
Cell. Mol. Life Sci.
, vol.64
, pp. 1395-1403
-
-
Kobayashi, T.1
-
22
-
-
33646147563
-
Intergenic transcripts regulate the epigenetic state of rRNA genes
-
Mayer, C., Schmitz, K., Grummt, I. and Santoro, R. (2006) Intergenic transcripts regulate the epigenetic state of rRNA genes. Mol. Cell22, 351-361.
-
(2006)
Mol. Cell
, vol.22
, pp. 351-361
-
-
Mayer, C.1
Schmitz, K.2
Grummt, I.3
Santoro, R.4
-
23
-
-
33846880495
-
Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data
-
Ganley, A.R. and Kobayashi, T. (2007) Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data. Genome Res.17, 184-191.
-
(2007)
Genome Res.
, vol.17
, pp. 184-191
-
-
Ganley, A.R.1
Kobayashi, T.2
-
24
-
-
80053195339
-
Monitoring the rate and dynamics of concerted evolution in the ribosomal DNA repeats of Saccharomyces cerevisiaeusing experimental evolution
-
Ganley, A.R. and Kobayashi, T. (2011) Monitoring the rate and dynamics of concerted evolution in the ribosomal DNA repeats of Saccharomyces cerevisiaeusing experimental evolution. Mol. Biol. Evol. 28, 2883-2891.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2883-2891
-
-
Ganley, A.R.1
Kobayashi, T.2
-
25
-
-
0033214237
-
TheSIR2/3/4complex and SIR2alone promote longevity in Saccharomyces cerevisiae by two different mechanisms
-
Kaeberlein, M., McVey, M. and Guarente, L. (1999) TheSIR2/3/4complex and SIR2alone promote longevity in Saccharomyces cerevisiae by two different mechanisms. Genes Dev.13, 2570-2580.
-
(1999)
Genes Dev.
, vol.13
, pp. 2570-2580
-
-
Kaeberlein, M.1
McVey, M.2
Guarente, L.3
-
26
-
-
0033120871
-
Elimination of replication fork block protein Fob1 extends the life span of yeast mother cells
-
Defossez, P.A., Prusty, R., Kaeberlein, M., Lin, S.J., Ferrigno, P., Silver, P.A., Keil, R.L. and Guarente, L. (1999) Elimination of replication fork block protein Fob1 extends the life span of yeast mother cells. Mol. Cell3, 447-455.
-
(1999)
Mol. Cell
, vol.3
, pp. 447-455
-
-
Defossez, P.A.1
Prusty, R.2
Kaeberlein, M.3
Lin, S.J.4
Ferrigno, P.5
Silver, P.A.6
Keil, R.L.7
Guarente, L.8
-
27
-
-
0035879981
-
New clues to old yeast
-
Jazwinsky, S.M. (2001) New clues to old yeast. Mech. Ageing Dev.122, 865-882.
-
(2001)
Mech. Ageing Dev.
, vol.122
, pp. 865-882
-
-
Jazwinsky, S.M.1
-
28
-
-
84884594512
-
Cellular senescence in yeast is regulated by rDNA noncoding transcription
-
Saka, K., Ide, S., Ganley, A.R. and Kobayashi, T. (2013) Cellular senescence in yeast is regulated by rDNA noncoding transcription. Curr. Biol. 23, 1794-1798.
-
(2013)
Curr. Biol.
, vol.23
, pp. 1794-1798
-
-
Saka, K.1
Ide, S.2
Ganley, A.R.3
Kobayashi, T.4
-
29
-
-
84858000209
-
The sirtuin SIRT6 regulates lifespan in male mice
-
Kanfi, Y., Naiman, S., Amir, G., Peshti, V., Zinman, G., Nahum, L., Bar-Joseph, Z. and Cohen, H.Y. (2012) The sirtuin SIRT6 regulates lifespan in male mice. Nature483, 218-221.
-
(2012)
Nature
, vol.483
, pp. 218-221
-
-
Kanfi, Y.1
Naiman, S.2
Amir, G.3
Peshti, V.4
Zinman, G.5
Nahum, L.6
Bar-Joseph, Z.7
Cohen, H.Y.8
-
30
-
-
80053168830
-
Longevity hits a roadblock
-
Lombard, D.B., Pletcher, S.D., Canto, C. and Auwerx, J. (2011) Longevity hits a roadblock. Nature477, 410-411.
-
(2011)
Nature
, vol.477
, pp. 410-411
-
-
Lombard, D.B.1
Pletcher, S.D.2
Canto, C.3
Auwerx, J.4
-
31
-
-
0242585476
-
Asymmetric inheritance of oxidatively damaged proteins during cytokinesis
-
Aguilaniu, H., Gustafsson, L., Rigoulet, M. and Nyström, T. (2003) Asymmetric inheritance of oxidatively damaged proteins during cytokinesis. Science299, 1751-1753.
-
(2003)
Science
, vol.299
, pp. 1751-1753
-
-
Aguilaniu, H.1
Gustafsson, L.2
Rigoulet, M.3
Nyström, T.4
-
32
-
-
40349106009
-
A new role of the rDNA and nucleolus in the nucleus-rDNA instability maintains genome integrity
-
Kobayashi, T. (2008) A new role of the rDNA and nucleolus in the nucleus-rDNA instability maintains genome integrity. Bioessays30, 267-272.
-
(2008)
Bioessays
, vol.30
, pp. 267-272
-
-
Kobayashi, T.1
-
33
-
-
69749092718
-
The effect of replication initiation on gene amplification in the rDNA and its relationship to aging
-
Ganley, A.R.D., Ide, S., Saka, K. and Kobayashi, T. (2009) The effect of replication initiation on gene amplification in the rDNA and its relationship to aging. Mol. Cell35, 683-693.
-
(2009)
Mol. Cell
, vol.35
, pp. 683-693
-
-
Ganley, A.R.D.1
Ide, S.2
Saka, K.3
Kobayashi, T.4
-
34
-
-
84901598720
-
-
Edited by Herve Seligmann, InTech, Chapter 13
-
Dalgaard, J.Z., Godfrey, E.L. and MacFarlane, R.J. (2011) DNA Replication-Current Advances. Edited by Herve Seligmann, InTech, Chapter 13.
-
(2011)
DNA Replication-Current Advances
-
-
Dalgaard, J.Z.1
Godfrey, E.L.2
MacFarlane, R.J.3
-
35
-
-
71549154379
-
Human rRNA gene clusters are recombinational hotspots in cancer
-
Stults, D.M., Killen, M.W., Williamson, E.P., Hourigan, J.S., Vargas, H.D., Arnold, S.M., Moscow, J.A. and Pierce, A.J. (2009) Human rRNA gene clusters are recombinational hotspots in cancer. Cancer Res. 69, 9096-9104.
-
(2009)
Cancer Res.
, vol.69
, pp. 9096-9104
-
-
Stults, D.M.1
Killen, M.W.2
Williamson, E.P.3
Hourigan, J.S.4
Vargas, H.D.5
Arnold, S.M.6
Moscow, J.A.7
Pierce, A.J.8
-
36
-
-
23744470383
-
Human ribosomal RNA gene arrays display a broad range of palindromic structures
-
Caburet, S., Conti, C., Schurra, C., Lebofsky, R., Edelstein, S.J. and Bensimon, A. (2005) Human ribosomal RNA gene arrays display a broad range of palindromic structures. Genome Res.15, 1079-1085.
-
(2005)
Genome Res.
, vol.15
, pp. 1079-1085
-
-
Caburet, S.1
Conti, C.2
Schurra, C.3
Lebofsky, R.4
Edelstein, S.J.5
Bensimon, A.6
-
37
-
-
0042420304
-
DNA damage foci at dysfunctional telomeres
-
Takai, H., Smogorzewska, A. and de Lange, T. (2003) DNA damage foci at dysfunctional telomeres. Curr. Biol.13, 1549-1556.
-
(2003)
Curr. Biol.
, vol.13
, pp. 1549-1556
-
-
Takai, H.1
Smogorzewska, A.2
De Lange, T.3
-
38
-
-
0344441890
-
A DNA damage checkpoint response in telomere-initiated senescence
-
D'adda di Fagagna, F., Reaper, P.M., Clay-Farrace, L., Fiegler, H., Carr, P., von Zglinicki, T., Saretzki, G., Carter, N.P. and Jackson, S.P. (2003) A DNA damage checkpoint response in telomere-initiated senescence. Nature426, 194-198.
-
(2003)
Nature
, vol.426
, pp. 194-198
-
-
D'adda di Fagagna, F.1
Reaper, P.M.2
Clay-Farrace, L.3
Fiegler, H.4
Carr, P.5
von Zglinicki, T.6
Saretzki, G.7
Carter, N.P.8
Jackson, S.P.9
-
39
-
-
2442511752
-
Telomere shortening triggers senescence of human cells through a pathway involving ATM, p53, and p21(CIP1), but not p16(INK4a)
-
Herbig, U., Jobling, W.A., Chen, B.P., Chen, D.J. and Sedivy, J.M. (2004) Telomere shortening triggers senescence of human cells through a pathway involving ATM, p53, and p21(CIP1), but not p16(INK4a). Mol. Cell14, 501-513.
-
(2004)
Mol. Cell
, vol.14
, pp. 501-513
-
-
Herbig, U.1
Jobling, W.A.2
Chen, B.P.3
Chen, D.J.4
Sedivy, J.M.5
-
40
-
-
79956291352
-
How does genome instability affect lifespan?: roles of rDNA and telomeres
-
Kobayashi, T. (2011) How does genome instability affect lifespan?: roles of rDNA and telomeres. Genes Cells16, 617-624.
-
(2011)
Genes Cells
, vol.16
, pp. 617-624
-
-
Kobayashi, T.1
-
41
-
-
0022402513
-
Identification of a specific telomere terminal transferase activity in Tetrahymena extracts
-
Greider, C.W. and Blackburn, E.H. (1985) Identification of a specific telomere terminal transferase activity in Tetrahymena extracts. Cell43, 405-413.
-
(1985)
Cell
, vol.43
, pp. 405-413
-
-
Greider, C.W.1
Blackburn, E.H.2
-
42
-
-
0018814593
-
Repeated genes in eukaryotes
-
Long, E.O. and Dawid, I.B. (1980) Repeated genes in eukaryotes. Annu. Rev. Biochem.49, 727-764.
-
(1980)
Annu. Rev. Biochem.
, vol.49
, pp. 727-764
-
-
Long, E.O.1
Dawid, I.B.2
-
43
-
-
79952118259
-
Collaboration of replication, recombination and noncoding transcription for gene amplification
-
Kobayashi, T. (2009) Collaboration of replication, recombination and noncoding transcription for gene amplification. Protein, Nucleic Acid Enzyme 54, 537-542.
-
(2009)
Protein, Nucleic Acid Enzyme
, vol.54
, pp. 537-542
-
-
Kobayashi, T.1
|