-
2
-
-
0037043719
-
Evolution, consequences and future of plant and animal domestication
-
Diamond J (2002) Evolution, consequences and future of plant and animal domestication. Nature 418: 700-707.
-
(2002)
Nature
, vol.418
, pp. 700-707
-
-
Diamond, J.1
-
3
-
-
50149121968
-
Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact
-
Zeder MA (2008) Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact. Proc Natl Acad Sci USA 105: 11597- 11604.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 11597-11604
-
-
Zeder, M.A.1
-
4
-
-
0035826870
-
Multiple maternal origins and weak phylogeographic structure in domestic goats
-
DOI 10.1073/pnas.091591198
-
Luikart G, Gielly L, Excoffier L, Vigne J-D, Bouvet J, et al. (2001) Multiple maternal origins and weak phylogeographic structure in domestic goats. Proc Natl Acad Sci USA 98: 5927-5932. (Pubitemid 32435744)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.10
, pp. 5927-5932
-
-
Luikart, G.1
Gielly, L.2
Excoffier, L.3
Vigne, J.-D.4
Bouvet, J.5
Taberlet, P.6
-
5
-
-
42449099846
-
Large-scale mitochondrial DNA analysis of the domestic goat reveals six haplogroups with high diversity
-
Naderi S, Rezaei H-R, Taberlet P, Zundel S, Rafat S-A, et al. (2007) Large-scale mitochondrial DNA analysis of the domestic goat reveals six haplogroups with high diversity. PLoS ONE 2: e1012.
-
(2007)
PLoS ONE
, vol.2
-
-
Naderi, S.1
Rezaei, H.-R.2
Taberlet, P.3
Zundel, S.4
Rafat, S.-A.5
-
6
-
-
56649112987
-
The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals
-
Naderi S, Rezaei H-R, Pompanon F, Blum MGB, Negrini R, et al. (2008) The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals. Proc Natl Acad Sci USA 105: 17659-17664.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 17659-17664
-
-
Naderi, S.1
Rezaei, H.-R.2
Pompanon, F.3
Blum, M.G.B.4
Negrini, R.5
-
7
-
-
84856402431
-
A dig into the past mitochondrial diversity of Corsican goats reveals the influence of secular herding practices
-
Hughes S, Fernàndez H, Cucchi T, Duffraisse M, Casabianca F, et al. (2012) A dig into the past mitochondrial diversity of Corsican goats reveals the influence of secular herding practices. PLoS ONE 7: e30272.
-
(2012)
PLoS ONE
, vol.7
-
-
Hughes, S.1
Fernàndez, H.2
Cucchi, T.3
Duffraisse, M.4
Casabianca, F.5
-
8
-
-
37349126735
-
Are cattle, sheep, and goats endangered species?
-
DOI 10.1111/j.1365-294X.2007.03475.x
-
Taberlet P, Valentini A, Rezaei HR, Naderi S, Pompanon F, et al. (2008) Are cattle, sheep, and goats endangered species? Mol Ecol 17: 275-284. (Pubitemid 350292469)
-
(2008)
Molecular Ecology
, vol.17
, Issue.1
, pp. 275-284
-
-
Taberlet, P.1
Valentini, A.2
Rezaei, H.R.3
Naderi, S.4
Pompanon, F.5
Negrini, R.6
Ajmone-Marsan, P.7
-
9
-
-
79952444958
-
Conservation genetics of cattle, sheep, and goats
-
Taberlet P, Coissac E, Pansu J, Pompanon F (2011) Conservation genetics of cattle, sheep, and goats. Comptes Rendus Biologies 334: 247-254.
-
(2011)
Comptes Rendus Biologies
, vol.334
, pp. 247-254
-
-
Taberlet, P.1
Coissac, E.2
Pansu, J.3
Pompanon, F.4
-
10
-
-
66849121980
-
The multifaceted origin of taurine cattle reflected by the mitochondrial genome
-
Achilli A, Bonfiglio S, Olivieri A, Malusà A, Pala M, et al. (2009) The multifaceted origin of taurine cattle reflected by the mitochondrial genome. PLoS ONE 4: e5753.
-
(2009)
PLoS ONE
, vol.4
-
-
Achilli, A.1
Bonfiglio, S.2
Olivieri, A.3
Malusà, A.4
Pala, M.5
-
11
-
-
84883634948
-
Phylogenetic relationships of three Italian Merino-derived sheep breeds evaluated through a complete mitogenome analysis
-
Lancioni H, Di Lorenzo P, Ceccobelli S, Perego UA, Miglio A, et al. (2013) Phylogenetic relationships of three Italian Merino-derived sheep breeds evaluated through a complete mitogenome analysis. PLoS ONE 8: e73712.
-
(2013)
PLoS ONE
, vol.8
-
-
Lancioni, H.1
Di Lorenzo, P.2
Ceccobelli, S.3
Perego, U.A.4
Miglio, A.5
-
12
-
-
84857152189
-
Haplotype affinities resolve a major component of goat (Capra hircus) mtDNA D-loop diversity and reveal specific features of the Sardinian stock
-
Piras D, Doro MG, Casu G, Melis MP, Vaccargiu S, et al. (2012) Haplotype affinities resolve a major component of goat (Capra hircus) mtDNA D-loop diversity and reveal specific features of the Sardinian stock. PLoS ONE 7: e30785.
-
(2012)
PLoS ONE
, vol.7
-
-
Piras, D.1
Doro, M.G.2
Casu, G.3
Melis, M.P.4
Vaccargiu, S.5
-
13
-
-
70450231699
-
Tracing the history of goat pastoralism: New clues from mitochondrial and Y chromosome DNA in North Africa
-
Pereira F, Queiròs S, Gusmào L, Nijman IJ, Cuppen E, et al. (2009) Tracing the history of goat pastoralism: new clues from mitochondrial and Y chromosome DNA in North Africa. Mol Biol Evol 26: 2765-2773.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 2765-2773
-
-
Pereira, F.1
Queiròs, S.2
Gusmào, L.3
Nijman, I.J.4
Cuppen, E.5
-
15
-
-
84872264656
-
Accumulation of slightly deleterious mutations in the mitochondrial genome: A hallmark of animal domestication
-
Hughes AL (2013) Accumulation of slightly deleterious mutations in the mitochondrial genome: A hallmark of animal domestication. Gene 515: 28-33.
-
(2013)
Gene
, vol.515
, pp. 28-33
-
-
Hughes, A.L.1
-
16
-
-
33746731132
-
Relaxation of selective constraint on dog mitochondrial DNA following domestication
-
DOI 10.1101/gr.5117706
-
Björnerfeldt S, Webster MT, Vilà C (2006) Relaxation of selective constraint on dog mitochondrial DNA following domestication. Genome Res 16: 990-994. (Pubitemid 44162258)
-
(2006)
Genome Research
, vol.16
, Issue.8
, pp. 990-994
-
-
Bjornerfeldt, S.1
Webster, M.T.2
Vila, C.3
-
17
-
-
84881009883
-
Domestication process of the goat revealed by an analysis of the nearly complete mitochondrial protein-encoding genes
-
Nomura K, Yonezawa T, Mano S, Kawakami S, Shedlock AM, et al. (2013) Domestication process of the goat revealed by an analysis of the nearly complete mitochondrial protein-encoding genes. PLoS ONE 8: e67775.
-
(2013)
PLoS ONE
, vol.8
-
-
Nomura, K.1
Yonezawa, T.2
Mano, S.3
Kawakami, S.4
Shedlock, A.M.5
-
18
-
-
77956500016
-
D-loop sequence mitochondrial DNA variability of Sarda goat and other goat breeds and populations reared in the Mediterranean area
-
Vacca GM, Daga C, Pazzola M, Carcangiu V, Dettori ML, et al. (2010) D-loop sequence mitochondrial DNA variability of Sarda goat and other goat breeds and populations reared in the Mediterranean area. J An Breed Genet 127: 352-360.
-
(2010)
J An Breed Genet
, vol.127
, pp. 352-360
-
-
Vacca, G.M.1
Daga, C.2
Pazzola, M.3
Carcangiu, V.4
Dettori, M.L.5
-
19
-
-
0026428610
-
Adaptive protein evolution at the Adh locus in Drosophila
-
McDonald JH, Kreitman M (1991) Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652-654. (Pubitemid 21896661)
-
(1991)
Nature
, vol.351
, Issue.6328
, pp. 652-654
-
-
McDonald, J.H.1
Kreitman, M.2
-
20
-
-
0035112134
-
A metrical analysis of a collection of modern goats (Capra hircus aegargus and C. h. hircus) from Iran and Iraq: Implications for the study of caprine domestication
-
DOI 10.1006/jasc.1999.0555
-
Zeder MA (2001) A metrical analysis of a collection of modern goats (Capra hircus aegargus and C. h. hircus) from Iran and Iraq: Implications for the study of Caprine domestication. J Archaeol Sci 28: 61-79. (Pubitemid 32192380)
-
(2001)
Journal of Archaeological Science
, vol.28
, Issue.1
, pp. 61-79
-
-
Zeder, M.A.1
-
21
-
-
0027373654
-
An A-to-G transition at nucleotide pair 11084 in the ND4 gene may be an mtDNA polymorphism
-
Sakuta R, Goto Y, Nonaka I, Horai S (1993) An A-to-G transition at nucleotide pair 11084 in the ND4 gene may be an mtDNA polymorphism. Am J Hum Genet 53: 964-965.
-
(1993)
Am J Hum Genet
, vol.53
, pp. 964-965
-
-
Sakuta, R.1
Goto, Y.2
Nonaka, I.3
Horai, S.4
-
22
-
-
79953706954
-
Comparing phylogeny and the predicted pathogenicity of protein variations reveals equal purifying selection across the global human mtDNA diversity
-
Pereira L, Soares P, Radivojac P, Li B, Samuels DC (2011) Comparing phylogeny and the predicted pathogenicity of protein variations reveals equal purifying selection across the global human mtDNA diversity. Am J Hum Genet 88: 433-439.
-
(2011)
Am J Hum Genet
, vol.88
, pp. 433-439
-
-
Pereira, L.1
Soares, P.2
Radivojac, P.3
Li, B.4
Samuels, D.C.5
-
23
-
-
33750360460
-
Divergent mtDNA lineages of goats in an Early Neolithic site, far from the initial domestication areas
-
DOI 10.1073/pnas.0602753103
-
Fernàndez H, Hughes S, Vigne J-D, Helmer D, Hodgins G, et al. (2006) Divergent mtDNA lineages of goats in an Early Neolithic site, far from the initial domestication areas. Proc Natl Acad Sci USA 103: 15375-15379. (Pubitemid 44625599)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.42
, pp. 15375-15379
-
-
Fernandez, H.1
Hughes, S.2
Vigne, J.-D.3
Helmer, D.4
Hodgins, G.5
Miquel, C.6
Hanni, C.7
Luikart, G.8
Taberlet, P.9
-
24
-
-
65649124210
-
Mitochondrial DNA diversity and origins of South and Central American goats
-
Amills M, Ramírez O, Tomàs A, Badaoui B, Marmi J, et al. (2009) Mitochondrial DNA diversity and origins of South and Central American goats. Animal Genet 40: 315-322.
-
(2009)
Animal Genet
, vol.40
, pp. 315-322
-
-
Amills, M.1
Ramírez, O.2
Tomàs, A.3
Badaoui, B.4
Marmi, J.5
-
25
-
-
38349192060
-
Strong variations of mitochondrial mutation rate across mammals - The longevity hypothesis
-
Nabholz B, Glèmin S, Galtier N (2008) Strong variations of mitochondrial mutation rate across mammals-the longevity hypothesis. Mol Biol Evol 25: 120-130.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 120-130
-
-
Nabholz, B.1
Glèmin, S.2
Galtier, N.3
-
28
-
-
84875280073
-
Evaluating purifying selection in the mitochondrial DNA of various mammalian species
-
Soares P, Abrantes D, Rito T, Thomson N, Radivojac P, et al. (2013) Evaluating purifying selection in the mitochondrial DNA of various mammalian species. PLoS ONE 8: e58993.
-
(2013)
PLoS ONE
, vol.8
-
-
Soares, P.1
Abrantes, D.2
Rito, T.3
Thomson, N.4
Radivojac, P.5
-
29
-
-
0037461034
-
TreeSAAP: Selection on amino acid properties using phylogenetic trees
-
DOI 10.1093/bioinformatics/btg043
-
Woolley S, Johnson J, Smith MJ, Crandall KA, McClellan DA (2003) TreeSAAP: Selection on Amino Acid Properties using phylogenetic trees. Bioinformatics 19: 671-672. (Pubitemid 36417070)
-
(2003)
Bioinformatics
, vol.19
, Issue.5
, pp. 671-672
-
-
Woolley, S.1
Johnson, J.2
Smith, M.J.3
Crandall, K.A.4
McClellan, D.A.5
-
30
-
-
77950211646
-
Linking the mitochondrial genotype to the organismal phenotype
-
Ballard JWO, Melvin RG (2010) Linking the mitochondrial genotype to the organismal phenotype. Mol Ecol 19: 1523-1539.
-
(2010)
Mol Ecol
, vol.19
, pp. 1523-1539
-
-
Ballard, J.W.O.1
Melvin, R.G.2
-
31
-
-
84890351930
-
mtDNA lineage expansions in Sherpa population suggest adaptive evolution in Tibetan highlands
-
Kang L, Zheng H-X, Chen F, Yan S, Liu K, et al. (2013) mtDNA lineage expansions in Sherpa population suggest adaptive evolution in Tibetan highlands. Mol Biol Evol 30: 2579-2587.
-
(2013)
Mol Biol Evol
, vol.30
, pp. 2579-2587
-
-
Kang, L.1
Zheng, H.-X.2
Chen, F.3
Yan, S.4
Liu, K.5
-
33
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
34
-
-
77956068579
-
Comparisons between mitochondrial genomes of domestic goat (Capra hircus) reveal the presence of numts and multiple sequencing errors
-
Hassanin A, Bonillo C, Nguyen BX, Cruaud C (2010) Comparisons between mitochondrial genomes of domestic goat (Capra hircus) reveal the presence of numts and multiple sequencing errors. Mitochondrial DNA 21: 68-76.
-
(2010)
Mitochondrial DNA
, vol.21
, pp. 68-76
-
-
Hassanin, A.1
Bonillo, C.2
Nguyen, B.X.3
Cruaud, C.4
-
36
-
-
45949109669
-
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
-
DOI 10.1093/bib/bbn017, Special Issue: Critical Technologies for Bioinformatics
-
Kumar S, Nei M, Dudley J, Tamura K (2008) MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform 9: 299-306. (Pubitemid 351890826)
-
(2008)
Briefings in Bioinformatics
, vol.9
, Issue.4
, pp. 299-306
-
-
Kumar, S.1
Nei, M.2
Dudley, J.3
Tamura, K.4
-
37
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
DOI 10.1093/nar/25.24.4876
-
Thompson JD, Gibson T, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24: 4876-4882. (Pubitemid 28022245)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
|