-
1
-
-
70849112486
-
Cell signaling in space and time: Where proteins come together and when they?re apart
-
Scott, J. D., and Pawson, T. (2009) Cell signaling in space and time: Where proteins come together and when they?re apart. Science 326, 1220-1224
-
(2009)
Science
, vol.326
, pp. 1220-1224
-
-
Scott, J.D.1
Pawson, T.2
-
2
-
-
84876158670
-
The switches.ELM resource: A compendium of conditional regulatory interaction interfaces
-
Van Roey, K., Dinkel, H., Weatheritt, R. J., Gibson, T. J., and Davey, N. E. (2013) The switches.ELM resource: A compendium of conditional regulatory interaction interfaces. Sci. Signal. 6, rs7
-
(2013)
Sci. Signal.
, vol.6
, pp. 7
-
-
Van Roey, K.1
Dinkel, H.2
Weatheritt, R.J.3
Gibson, T.J.4
Davey, N.E.5
-
3
-
-
35848955168
-
Mass spectrometry-based functional proteomics: From molecular machines to protein networks
-
Kocher, T., and Superti-Furga, G. (2007) Mass spectrometry-based functional proteomics: From molecular machines to protein networks. Nat. Methods 4, 807-815
-
(2007)
Nat. Methods
, vol.4
, pp. 807-815
-
-
Kocher, T.1
Superti-Furga, G.2
-
4
-
-
82155179340
-
Structural and functional protein network analyses predict novel signaling functions for rhodopsin
-
Kiel, C., Vogt, A., Campagna, A., Chatr-aryamontri, A., Swiatek-de Lange, M., Beer, M., Bolz, S., Mack, A. F., Kinkl, N., Cesareni, G., Serrano, L., and Ueffing, M. (2011) Structural and functional protein network analyses predict novel signaling functions for rhodopsin. Mol. Syst. Biol. 7, 551
-
(2011)
Mol. Syst. Biol.
, vol.7
, pp. 551
-
-
Kiel, C.1
Vogt, A.2
Campagna, A.3
Chatr-Aryamontri, A.4
Swiatek-De Lange, M.5
Beer, M.6
Bolz, S.7
Mack, A.F.8
Kinkl, N.9
Cesareni, G.10
Serrano, L.11
Ueffing, M.12
-
5
-
-
79957915102
-
Disruption of intraflagellar protein transport in photoreceptor cilia causes Leber congenital amaurosis in humans and mice
-
Boldt, K., Mans, D. A., Won, J., Van Reeuwijk, J., Vogt, A., Kinkl, N., Letteboer, S. J., Hicks, W. L., Hurd, R. E., Naggert, J. K., Texier, Y., Den Hollander, A. I., Koenekoop, R. K., Bennett, J., Cremers, F. P., Gloeckner, C. J., Nishina, P. M., Roepman, R., and Ueffing, M. (2011) Disruption of intraflagellar protein transport in photoreceptor cilia causes Leber congenital amaurosis in humans and mice. J. Clin. Invest. 121, 2169-2180
-
(2011)
J. Clin. Invest.
, vol.121
, pp. 2169-2180
-
-
Boldt, K.1
Mans, D.A.2
Won, J.3
Van Reeuwijk, J.4
Vogt, A.5
Kinkl, N.6
Letteboer, S.J.7
Hicks, W.L.8
Hurd, R.E.9
Naggert, J.K.10
Texier, Y.11
Den Hollander, A.I.12
Koenekoop, R.K.13
Bennett, J.14
Cremers, F.P.15
Gloeckner, C.J.16
Nishina, P.M.17
Roepman, R.18
Ueffing, M.19
-
6
-
-
34547131554
-
Analysis of protein complexes using mass spectrometry
-
Gingras, A. C., Gstaiger, M., Raught, B., and Aebersold, R. (2007) Analysis of protein complexes using mass spectrometry. Nat. Rev. Mol. Cell Biol. 8, 645-654
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 645-654
-
-
Gingras, A.C.1
Gstaiger, M.2
Raught, B.3
Aebersold, R.4
-
7
-
-
33644555054
-
Proteome survey reveals modularity of the yeast cell machinery
-
Gavin, A. C., Aloy, P., Grandi, P., Krause, R., Boesche, M., Marzioch, M., Rau, C., Jensen, L. J., Bastuck, S., Dumpelfeld, B., Edelmann, A., Heurtier, M. A., Hoffman, V., Hoefert, C., Klein, K., Hudak, M., Michon, A. M., Schelder, M., Schirle, M., Remor, M., Rudi, T., Hooper, S., Bauer, A., Bouwmeester, T., Casari, G., Drewes, G., Neubauer, G., Rick, J. M., Kuster, B., Bork, P., Russell, R. B., and Superti-Furga, G. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature 440, 631-636
-
(2006)
Nature
, vol.440
, pp. 631-636
-
-
Gavin, A.C.1
Aloy, P.2
Grandi, P.3
Krause, R.4
Boesche, M.5
Marzioch, M.6
Rau, C.7
Jensen, L.J.8
Bastuck, S.9
Dumpelfeld, B.10
Edelmann, A.11
Heurtier, M.A.12
Hoffman, V.13
Hoefert, C.14
Klein, K.15
Hudak, M.16
Michon, A.M.17
Schelder, M.18
Schirle, M.19
Remor, M.20
Rudi, T.21
Hooper, S.22
Bauer, A.23
Bouwmeester, T.24
Casari, G.25
Drewes, G.26
Neubauer, G.27
Rick, J.M.28
Kuster, B.29
Bork, P.30
Russell, R.B.31
Superti-Furga, G.32
more..
-
8
-
-
35448961665
-
When cilia go bad: Cilia defects and ciliopathies
-
Fliegauf, M., Benzing, T., and Omran, H. (2007) When cilia go bad: Cilia defects and ciliopathies. Nat. Rev. Mol. Cell Biol. 8, 880-893
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 880-893
-
-
Fliegauf, M.1
Benzing, T.2
Omran, H.3
-
9
-
-
37048999786
-
A novel tandem affinity purification strategy for the efficient isolation and characterisation of native protein complexes
-
Gloeckner, C. J., Boldt, K., Schumacher, A., Roepman, R., and Ueffing, M. (2007) A novel tandem affinity purification strategy for the efficient isolation and characterisation of native protein complexes. Proteomics 7, 4228-4234
-
(2007)
Proteomics
, vol.7
, pp. 4228-4234
-
-
Gloeckner, C.J.1
Boldt, K.2
Schumacher, A.3
Roepman, R.4
Ueffing, M.5
-
11
-
-
29244448703
-
Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap
-
Olsen, J. V., de Godoy, L. M., Li, G., Macek, B., Mortensen, P., Pesch, R., Makarov, A., Lange, O., Horning, S., and Mann, M. (2005) Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap. Mol. Cell. Proteomics 4, 2010-2021
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 2010-2021
-
-
Olsen, J.V.1
De Godoy, L.M.2
Li, G.3
Macek, B.4
Mortensen, P.5
Pesch, R.6
Makarov, A.7
Lange, O.8
Horning, S.9
Mann, M.10
-
12
-
-
0037108887
-
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
-
Keller, A., Nesvizhskii, A. I., Kolker, E., and Aebersold, R. (2002) Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal. Chem. 74, 5383-5392
-
(2002)
Anal. Chem.
, vol.74
, pp. 5383-5392
-
-
Keller, A.1
Nesvizhskii, A.I.2
Kolker, E.3
Aebersold, R.4
-
13
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
Nesvizhskii, A. I., Keller, A., Kolker, E., and Aebersold, R. (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 75, 4646-4658
-
(2003)
Anal. Chem.
, vol.75
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
14
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox, J., and Mann, M. (2008) MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 26, 1367-1372
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
16
-
-
0346874342
-
Proteomic characterization of the human centrosome by protein correlation profiling
-
Andersen, J. S., Wilkinson, C. J., Mayor, T., Mortensen, P., Nigg, E. A., and Mann, M. (2003) Proteomic characterization of the human centrosome by protein correlation profiling. Nature 426, 570-574
-
(2003)
Nature
, vol.426
, pp. 570-574
-
-
Andersen, J.S.1
Wilkinson, C.J.2
Mayor, T.3
Mortensen, P.4
Nigg, E.A.5
Mann, M.6
-
17
-
-
79958234181
-
-
Oksanen, J., Blanchet, F. G., Kindt, R., Legendre, P., Minchin, P. R., O?Hara, R. B., Simpson, G. L., Solymos, P., Stevens, M. H. H., and Wagner, H. (2013) vegan: Community Ecology Package. R package version 2.1-27/r2470. .
-
(2013)
Vegan: Community Ecology Package. R Package Version 2.1-27/r2470
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
Ohara, R.B.6
Simpson, G.L.7
Solymos, P.8
Stevens, M.H.H.9
Wagner, H.10
-
18
-
-
77953226426
-
Internal architecture of mitochondrial complex i from Arabidopsis thaliana
-
Klodmann, J., Sunderhaus, S., Nimtz, M., Jansch, L., and Braun, H. P. (2010) Internal architecture of mitochondrial complex I from Arabidopsis thaliana. Plant Cell 22, 797-810
-
(2010)
Plant Cell
, vol.22
, pp. 797-810
-
-
Klodmann, J.1
Sunderhaus, S.2
Nimtz, M.3
Jansch, L.4
Braun, H.P.5
-
19
-
-
0035980050
-
Detergents as tools in membrane biochemistry
-
Garavito, R. M., and Ferguson-Miller, S. (2001) Detergents as tools in membrane biochemistry. J. Biol. Chem. 276, 32403-32406
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 32403-32406
-
-
Garavito, R.M.1
Ferguson-Miller, S.2
-
20
-
-
73649087584
-
On the mechanism of SDS-induced protein denaturation
-
Bhuyan, A. K. (2010) On the mechanism of SDS-induced protein denaturation. Biopolymers 93, 186-199
-
(2010)
Biopolymers
, vol.93
, pp. 186-199
-
-
Bhuyan, A.K.1
-
21
-
-
76949097340
-
Quantitative proteomics reveals subset-specific viral recognition in dendritic cells
-
Luber, C. A., Cox, J., Lauterbach, H., Fancke, B., Selbach, M., Tschopp, J., Akira, S., Wiegand, M., Hochrein, H., O?Keeffe, M., and Mann, M. (2010) Quantitative proteomics reveals subset-specific viral recognition in dendritic cells. Immunity 32, 279-289
-
(2010)
Immunity
, vol.32
, pp. 279-289
-
-
Luber, C.A.1
Cox, J.2
Lauterbach, H.3
Fancke, B.4
Selbach, M.5
Tschopp, J.6
Akira, S.7
Wiegand, M.8
Hochrein, H.9
Okeeffe, M.10
Mann, M.11
-
22
-
-
80455154960
-
Structural basis of 14-3-3 protein functions
-
Obsil, T., and Obsilova, V. (2011) Structural basis of 14-3-3 protein functions. Semin. Cell Dev. Biol. 22, 663-672
-
(2011)
Semin. Cell Dev. Biol.
, vol.22
, pp. 663-672
-
-
Obsil, T.1
Obsilova, V.2
-
23
-
-
84864768662
-
Interactions of an arabidopsis ranbpm homologue with lish-ctlh domain proteins revealed high conservation of ctlh complexes in eukaryotes
-
Tomastikova, E., Cenklova, V., Kohoutova, L., Petrovska, B., Vachova, L., Halada, P., Kocarova, G., and Binarova, P. (2012) Interactions of an Arabidopsis RanBPM homologue with LisH-CTLH domain proteins revealed high conservation of CTLH complexes in eukaryotes. BMC Plant Biol. 12, 83
-
(2012)
BMC Plant Biol.
, vol.12
, pp. 83
-
-
Tomastikova, E.1
Cenklova, V.2
Kohoutova, L.3
Petrovska, B.4
Vachova, L.5
Halada, P.6
Kocarova, G.7
Binarova, P.8
-
24
-
-
77957682469
-
TULP3 bridges the IFT-A complex and membrane phosphoinositides to promote trafficking of G protein-coupled receptors into primary cilia
-
Mukhopadhyay, S., Wen, X., Chih, B., Nelson, C. D., Lane, W. S., Scales, S. J., and Jackson, P. K. (2010) TULP3 bridges the IFT-A complex and membrane phosphoinositides to promote trafficking of G protein-coupled receptors into primary cilia. Genes Dev. 24, 2180-2193
-
(2010)
Genes Dev.
, vol.24
, pp. 2180-2193
-
-
Mukhopadhyay, S.1
Wen, X.2
Chih, B.3
Nelson, C.D.4
Lane, W.S.5
Scales, S.J.6
Jackson, P.K.7
-
25
-
-
70349771201
-
Tandem affinity purification of protein complexes from mammalian cells by the Strep/FLAG (SF)-TAP tag
-
Gloeckner, C. J., Boldt, K., Schumacher, A., and Ueffing, M. (2009) Tandem affinity purification of protein complexes from mammalian cells by the Strep/FLAG (SF)-TAP tag. Methods Mol. Biol. 564, 359-372
-
(2009)
Methods Mol. Biol.
, vol.564
, pp. 359-372
-
-
Gloeckner, C.J.1
Boldt, K.2
Schumacher, A.3
Ueffing, M.4
-
26
-
-
34250674456
-
Ranbpm, muskelin, p48emlp, p44ctlh, and the armadillo-repeat proteins armc8alpha and armc8beta are components of the CTLH complex
-
Kobayashi, N., Yang, J., Ueda, A., Suzuki, T., Tomaru, K., Takeno, M., Okuda, K., and Ishigatsubo, Y. (2007) RanBPM, Muskelin, p48EMLP, p44CTLH, and the armadillo-repeat proteins ARMC8alpha and ARMC8beta are components of the CTLH complex. Gene 396, 236-247
-
(2007)
Gene
, vol.396
, pp. 236-247
-
-
Kobayashi, N.1
Yang, J.2
Ueda, A.3
Suzuki, T.4
Tomaru, K.5
Takeno, M.6
Okuda, K.7
Ishigatsubo, Y.8
-
27
-
-
42949095911
-
BAC TransgeneOmics: A high-throughput method for exploration of protein function in mammals
-
Poser, I., Sarov, M., Hutchins, J. R., Heriche, J. K., Toyoda, Y., Pozniakovsky, A., Weigl, D., Nitzsche, A., Hegemann, B., Bird, A. W., Pelletier, L., Kittler, R., Hua, S., Naumann, R., Augsburg, M., Sykora, M. M., Hofemeister, H., Zhang, Y., Nasmyth, K., White, K. P., Dietzel, S., Mechtler, K., Durbin, R., Stewart, A. F., Peters, J. M., Buchholz, F., and Hyman, A. A. (2008) BAC TransgeneOmics: A high-throughput method for exploration of protein function in mammals. Nat. Methods 5, 409-415
-
(2008)
Nat. Methods
, vol.5
, pp. 409-415
-
-
Poser, I.1
Sarov, M.2
Hutchins, J.R.3
Heriche, J.K.4
Toyoda, Y.5
Pozniakovsky, A.6
Weigl, D.7
Nitzsche, A.8
Hegemann, B.9
Bird, A.W.10
Pelletier, L.11
Kittler, R.12
Hua, S.13
Naumann, R.14
Augsburg, M.15
Sykora, M.M.16
Hofemeister, H.17
Zhang, Y.18
Nasmyth, K.19
White, K.P.20
Dietzel, S.21
Mechtler, K.22
Durbin, R.23
Stewart, A.F.24
Peters, J.M.25
Buchholz, F.26
Hyman, A.A.27
more..
-
28
-
-
84881437733
-
The transience of transient overexpression
-
Gibson, T. J., Seiler, M., and Veitia, R. A. (2013) The transience of transient overexpression. Nat. Methods 10, 715-721
-
(2013)
Nat. Methods
, vol.10
, pp. 715-721
-
-
Gibson, T.J.1
Seiler, M.2
Veitia, R.A.3
|