메뉴 건너뛰기




Volumn 9, Issue 1, 2014, Pages

Stringent homology-based prediction of H. sapiens-M. tuberculosis H37Rv protein-protein interactions

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; HSAD PROTEIN, MYCOBACTERIUM TUBERCULOSIS; HYDROLASE;

EID: 84899479119     PISSN: None     EISSN: 17456150     Source Type: Journal    
DOI: 10.1186/1745-6150-9-5     Document Type: Article
Times cited : (66)

References (74)
  • 1
    • 0034679955 scopus 로고    scopus 로고
    • New fronts in an old war
    • 10.1038/35021291, 10963570
    • Butler D. New fronts in an old war. Nature 2000, 406(6797):670-672. 10.1038/35021291, 10963570.
    • (2000) Nature , vol.406 , Issue.6797 , pp. 670-672
    • Butler, D.1
  • 2
    • 4444291069 scopus 로고    scopus 로고
    • Interplay between mycobacteria and host signalling pathways
    • 10.1038/nrmicro840, 15083155
    • Koul A, Herget T, Klebl B, Ullrich A. Interplay between mycobacteria and host signalling pathways. Nat Rev Microbiol 2004, 2(3):189-202. 10.1038/nrmicro840, 15083155.
    • (2004) Nat Rev Microbiol , vol.2 , Issue.3 , pp. 189-202
    • Koul, A.1    Herget, T.2    Klebl, B.3    Ullrich, A.4
  • 3
    • 26244436989 scopus 로고    scopus 로고
    • Mycobacterial manipulation of the host cell
    • Hestvik A, Hmama Z, Av-Gay Y. Mycobacterial manipulation of the host cell. FEMS Microbiol Rev 2006, 29(5):1041-1050.
    • (2006) FEMS Microbiol Rev , vol.29 , Issue.5 , pp. 1041-1050
    • Hestvik, A.1    Hmama, Z.2    Av-Gay, Y.3
  • 5
    • 84874363340 scopus 로고    scopus 로고
    • Progress in computational studies of host-pathogen interactions
    • Zhou H, Jin J, Wong L. Progress in computational studies of host-pathogen interactions. J Bioinform Comput Biol 2013, 11(2):26.
    • (2013) J Bioinform Comput Biol , vol.11 , Issue.2 , pp. 26
    • Zhou, H.1    Jin, J.2    Wong, L.3
  • 6
    • 0035211290 scopus 로고    scopus 로고
    • Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or " interologs"
    • 10.1101/gr.205301, 311221, 11731503
    • Matthews L, Vaglio P, Reboul J, Ge H, Davis B, Garrels J, Vincent S, Vidal M. Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or " interologs" . Genome Res 2001, 11(12):2120-2126. 10.1101/gr.205301, 311221, 11731503.
    • (2001) Genome Res , vol.11 , Issue.12 , pp. 2120-2126
    • Matthews, L.1    Vaglio, P.2    Reboul, J.3    Ge, H.4    Davis, B.5    Garrels, J.6    Vincent, S.7    Vidal, M.8
  • 7
    • 57649203329 scopus 로고    scopus 로고
    • Ortholog-based protein-protein interaction prediction and its application to inter-species interactions
    • Lee SA, Chan C, Tsai CH, Lai JM, Wang FS, Kao CY, Huang CY. Ortholog-based protein-protein interaction prediction and its application to inter-species interactions. BMC Bioinformatics 2008, 9(Suppl 12):S11.
    • (2008) BMC Bioinformatics , vol.9 , Issue.SUPPL. 12
    • Lee, S.A.1    Chan, C.2    Tsai, C.H.3    Lai, J.M.4    Wang, F.S.5    Kao, C.Y.6    Huang, C.Y.7
  • 8
    • 53249093973 scopus 로고    scopus 로고
    • A data integration approach to predict host-pathogen protein-protein interactions: application to recognize protein interactions between human and a malarial parasite
    • Krishnadev O, Srinivasan N. A data integration approach to predict host-pathogen protein-protein interactions: application to recognize protein interactions between human and a malarial parasite. In Silico Biol 2008, 8(3):235-250.
    • (2008) In Silico Biol , vol.8 , Issue.3 , pp. 235-250
    • Krishnadev, O.1    Srinivasan, N.2
  • 9
    • 72949116999 scopus 로고    scopus 로고
    • Prediction of protein-protein interactions between Helicobacter pylori and a human host
    • 10.1039/b906543c, 20023722
    • Tyagi N, Krishnadev O, Srinivasan N. Prediction of protein-protein interactions between Helicobacter pylori and a human host. Mol Biosyst 2009, 5(12):1630-1635. 10.1039/b906543c, 20023722.
    • (2009) Mol Biosyst , vol.5 , Issue.12 , pp. 1630-1635
    • Tyagi, N.1    Krishnadev, O.2    Srinivasan, N.3
  • 10
    • 79953269226 scopus 로고    scopus 로고
    • Prediction of protein-protein interactions between human host and a pathogen and its application to three pathogenic bacteria
    • 10.1016/j.ijbiomac.2011.01.030, 21310175
    • Krishnadev O, Srinivasan N. Prediction of protein-protein interactions between human host and a pathogen and its application to three pathogenic bacteria. Int J Biol Macromol 2011, 48:613-619. 10.1016/j.ijbiomac.2011.01.030, 21310175.
    • (2011) Int J Biol Macromol , vol.48 , pp. 613-619
    • Krishnadev, O.1    Srinivasan, N.2
  • 11
    • 81255128913 scopus 로고    scopus 로고
    • Computational prediction of host-parasite protein interactions between P. falciparum and H. sapiens
    • 10.1371/journal.pone.0026960, 3219658, 22114664
    • Wuchty S. Computational prediction of host-parasite protein interactions between P. falciparum and H. sapiens. PLoS ONE 2011, 6(11):e26960. 10.1371/journal.pone.0026960, 3219658, 22114664.
    • (2011) PLoS ONE , vol.6 , Issue.11
    • Wuchty, S.1
  • 12
    • 79960617916 scopus 로고    scopus 로고
    • Structural principles within the human-virus protein-protein interaction network
    • 10.1073/pnas.1101440108, 3127880, 21680884
    • Franzosa E, Xia Y. Structural principles within the human-virus protein-protein interaction network. Proc Natl Acad Sci USA 2011, 108(26):10538-10543. 10.1073/pnas.1101440108, 3127880, 21680884.
    • (2011) Proc Natl Acad Sci USA , vol.108 , Issue.26 , pp. 10538-10543
    • Franzosa, E.1    Xia, Y.2
  • 14
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: new features for data integration and network visualization
    • 10.1093/bioinformatics/btq675, 3031041, 21149340
    • Smoot M, Ono K, Ruscheinski J, Wang P, Ideker T. Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 2011, 27(3):431-432. 10.1093/bioinformatics/btq675, 3031041, 21149340.
    • (2011) Bioinformatics , vol.27 , Issue.3 , pp. 431-432
    • Smoot, M.1    Ono, K.2    Ruscheinski, J.3    Wang, P.4    Ideker, T.5
  • 18
    • 84875807067 scopus 로고    scopus 로고
    • BBH-LS: an algorithm for computing positional homologs using sequence and gene context similarity
    • 10.1186/1752-0509-6-S1-S22, 3403649, 23046607
    • Zhang M, Leong H. BBH-LS: an algorithm for computing positional homologs using sequence and gene context similarity. BMC Syst Biol 2012, 6(Suppl 1):S22. 10.1186/1752-0509-6-S1-S22, 3403649, 23046607.
    • (2012) BMC Syst Biol , vol.6 , Issue.SUPPL. 1
    • Zhang, M.1    Leong, H.2
  • 20
    • 0038342438 scopus 로고    scopus 로고
    • Unique gene expression profiles of human macrophages and dendritic cells to phylogenetically distinct parasites
    • 10.1182/blood-2002-10-3232, 12663451
    • Chaussabel D, Semnani R, McDowell M, Sacks D, Sher A, Nutman T. Unique gene expression profiles of human macrophages and dendritic cells to phylogenetically distinct parasites. Blood 2003, 102(2):672-681. 10.1182/blood-2002-10-3232, 12663451.
    • (2003) Blood , vol.102 , Issue.2 , pp. 672-681
    • Chaussabel, D.1    Semnani, R.2    McDowell, M.3    Sacks, D.4    Sher, A.5    Nutman, T.6
  • 21
    • 36448963759 scopus 로고    scopus 로고
    • Host-pathogen protein interactions predicted by comparative modeling
    • 10.1110/ps.073228407, 2222825, 17965183
    • Davis FP, Barkan DT, Eswar N, McKerrow JH, Sali A. Host-pathogen protein interactions predicted by comparative modeling. Protein Sci 2007, 16(12):2585-2596. 10.1110/ps.073228407, 2222825, 17965183.
    • (2007) Protein Sci , vol.16 , Issue.12 , pp. 2585-2596
    • Davis, F.P.1    Barkan, D.T.2    Eswar, N.3    McKerrow, J.H.4    Sali, A.5
  • 22
    • 0038005018 scopus 로고    scopus 로고
    • DAVID: database for annotation, visualization, and integrated discovery
    • 10.1186/gb-2003-4-5-p3, 3720094, 12734009
    • Dennis GJ, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC, Lempicki RA. DAVID: database for annotation, visualization, and integrated discovery. Genome Biol 2003, 4(5):P3. 10.1186/gb-2003-4-5-p3, 3720094, 12734009.
    • (2003) Genome Biol , vol.4 , Issue.5
    • Dennis, G.J.1    Sherman, B.T.2    Hosack, D.A.3    Yang, J.4    Gao, W.5    Lane, H.C.6    Lempicki, R.A.7
  • 23
    • 84862247236 scopus 로고    scopus 로고
    • Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets
    • 10.1186/1471-2164-12-S3-S20, 3333180, 22369691
    • Zhou H, Wong L. Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets. BMC Genomics 2011, 12(Suppl 3):S20. 10.1186/1471-2164-12-S3-S20, 3333180, 22369691.
    • (2011) BMC Genomics , vol.12 , Issue.SUPPL. 3
    • Zhou, H.1    Wong, L.2
  • 24
    • 84878658527 scopus 로고    scopus 로고
    • IntPath-an integrated pathway gene relationship database for model organisms and important pathogens
    • Zhou H, Jin J, Zhang H, Bo Y, Wozniak M, Wong L. IntPath-an integrated pathway gene relationship database for model organisms and important pathogens. BMC Syst Biol 2012, 6(Suppl 2):S2.
    • (2012) BMC Syst Biol , vol.6 , Issue.SUPPL. 2
    • Zhou, H.1    Jin, J.2    Zhang, H.3    Bo, Y.4    Wozniak, M.5    Wong, L.6
  • 25
    • 80055082271 scopus 로고    scopus 로고
    • Accelerated profile HMM searches
    • 10.1371/journal.pcbi.1002195, 3197634, 22039361
    • Eddy S. Accelerated profile HMM searches. PLoS Comput Biol 2011, 7(10):e1002195. 10.1371/journal.pcbi.1002195, 3197634, 22039361.
    • (2011) PLoS Comput Biol , vol.7 , Issue.10
    • Eddy, S.1
  • 29
    • 78651277455 scopus 로고    scopus 로고
    • DOMINE: a comprehensive collection of known and predicted domain-domain interactions
    • 3013741, 21113022
    • Yellaboina S, Tasneem A, Zaykin D, Raghavachari B, Jothi R. DOMINE: a comprehensive collection of known and predicted domain-domain interactions. Nucleic Acids Res 2011, 39(suppl 1):D730-D735. 3013741, 21113022.
    • (2011) Nucleic Acids Res , vol.39 , Issue.SUPPL. 1
    • Yellaboina, S.1    Tasneem, A.2    Zaykin, D.3    Raghavachari, B.4    Jothi, R.5
  • 30
    • 58149200940 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1, human protein interaction database at NCBI
    • 2686594, 18927109
    • Fu W, Sanders-Beer B, Katz K, Maglott D, Pruitt K, Ptak R. Human immunodeficiency virus type 1, human protein interaction database at NCBI. Nucleic Acids Res 2009, 37(suppl 1):D417-D422. 2686594, 18927109.
    • (2009) Nucleic Acids Res , vol.37 , Issue.SUPPL. 1
    • Fu, W.1    Sanders-Beer, B.2    Katz, K.3    Maglott, D.4    Pruitt, K.5    Ptak, R.6
  • 31
    • 0033214553 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis inhibits IFN- γ transcriptional responses without inhibiting activation of STAT1
    • Ting L, Kim A, Cattamanchi A, Ernst J. Mycobacterium tuberculosis inhibits IFN- γ transcriptional responses without inhibiting activation of STAT1. J Immunol 1999, 163(7):3898-3906.
    • (1999) J Immunol , vol.163 , Issue.7 , pp. 3898-3906
    • Ting, L.1    Kim, A.2    Cattamanchi, A.3    Ernst, J.4
  • 32
    • 0032817723 scopus 로고    scopus 로고
    • Transcriptional activation of HIV by Mycobacterium tuberculosis in human monocytes
    • 10.1046/j.1365-2249.1999.00952.x, 1905327, 10444265
    • Toossi Z, Xia L, Wu M, Salvekar A. Transcriptional activation of HIV by Mycobacterium tuberculosis in human monocytes. Clin Exp Immunol 1999, 117(2):324-330. 10.1046/j.1365-2249.1999.00952.x, 1905327, 10444265.
    • (1999) Clin Exp Immunol , vol.117 , Issue.2 , pp. 324-330
    • Toossi, Z.1    Xia, L.2    Wu, M.3    Salvekar, A.4
  • 33
    • 84880841726 scopus 로고    scopus 로고
    • Characterizing virulence-specific perturbations in the mitochondrial function of macrophages infected with mycobacterium tuberculosis
    • 3580321, 23435464
    • Jamwal S, Midha MK, Verma HN, Basu A, Rao KV, Manivel V. Characterizing virulence-specific perturbations in the mitochondrial function of macrophages infected with mycobacterium tuberculosis. Sci Rep 2013, 3:1328. 3580321, 23435464.
    • (2013) Sci Rep , vol.3 , pp. 1328
    • Jamwal, S.1    Midha, M.K.2    Verma, H.N.3    Basu, A.4    Rao, K.V.5    Manivel, V.6
  • 34
    • 0342369377 scopus 로고    scopus 로고
    • Pathogenic mycobacteria disrupt the macrophage actin filament network
    • 10.1128/IAI.68.5.2655-2662.2000, 97472, 10768957
    • Guérin I, de Chastellier C. Pathogenic mycobacteria disrupt the macrophage actin filament network. Infect Immun 2000, 68(5):2655-2662. 10.1128/IAI.68.5.2655-2662.2000, 97472, 10768957.
    • (2000) Infect Immun , vol.68 , Issue.5 , pp. 2655-2662
    • Guérin, I.1    de Chastellier, C.2
  • 35
    • 0033764345 scopus 로고    scopus 로고
    • Disruption of the actin filament network affects delivery of endocytic contents marker to phagosomes with early endosome characteristics: the case of phagosomes with pathogenic mycobacteria
    • 10.1078/0171-9335-00092, 11089922
    • Guérin I, de Chastellier C. Disruption of the actin filament network affects delivery of endocytic contents marker to phagosomes with early endosome characteristics: the case of phagosomes with pathogenic mycobacteria. Eur J Cell Biol 2000, 79(10):735-749. 10.1078/0171-9335-00092, 11089922.
    • (2000) Eur J Cell Biol , vol.79 , Issue.10 , pp. 735-749
    • Guérin, I.1    de Chastellier, C.2
  • 36
    • 0042471938 scopus 로고    scopus 로고
    • Selected lipids activate phagosome actin assembly and maturation resulting in killing of pathogenic mycobacteria
    • 10.1038/ncb1036, 12942085
    • Anes E, Kühnel MP, Bos E, Moniz-Pereira J, Habermann A, Griffiths G. Selected lipids activate phagosome actin assembly and maturation resulting in killing of pathogenic mycobacteria. Nat Cell Biol 2003, 5(9):793-802. 10.1038/ncb1036, 12942085.
    • (2003) Nat Cell Biol , vol.5 , Issue.9 , pp. 793-802
    • Anes, E.1    Kühnel, M.P.2    Bos, E.3    Moniz-Pereira, J.4    Habermann, A.5    Griffiths, G.6
  • 37
    • 79959729031 scopus 로고    scopus 로고
    • Heparin-binding hemagglutinin HBHA from Mycobacterium tuberculosis affects actin polymerisation
    • 10.1016/j.bbrc.2011.05.159, 21672524
    • Esposito C, Marasco D, Delogu G, Pedone E, Berisio R. Heparin-binding hemagglutinin HBHA from Mycobacterium tuberculosis affects actin polymerisation. Biochem Biophys Res Commun 2011, 410(2):339-344. 10.1016/j.bbrc.2011.05.159, 21672524.
    • (2011) Biochem Biophys Res Commun , vol.410 , Issue.2 , pp. 339-344
    • Esposito, C.1    Marasco, D.2    Delogu, G.3    Pedone, E.4    Berisio, R.5
  • 38
    • 84856785397 scopus 로고    scopus 로고
    • Manipulation of kinase signaling by bacterial pathogens
    • 10.1083/jcb.201107132, 3246894, 22123833
    • Krachler A, Woolery A, Orth K. Manipulation of kinase signaling by bacterial pathogens. J Cell Biol 2011, 195(7):1083-1092. 10.1083/jcb.201107132, 3246894, 22123833.
    • (2011) J Cell Biol , vol.195 , Issue.7 , pp. 1083-1092
    • Krachler, A.1    Woolery, A.2    Orth, K.3
  • 40
    • 0023806438 scopus 로고
    • Expression of tumor necrosis factor in vitro by human mononuclear phagocytes stimulated with whole Mycobacterium bovis BCG and mycobacterial antigens
    • 259742, 3053456
    • Valone S, Rich E, Wallis R, Ellner J. Expression of tumor necrosis factor in vitro by human mononuclear phagocytes stimulated with whole Mycobacterium bovis BCG and mycobacterial antigens. Infect Immun 1988, 56(12):3313-3315. 259742, 3053456.
    • (1988) Infect Immun , vol.56 , Issue.12 , pp. 3313-3315
    • Valone, S.1    Rich, E.2    Wallis, R.3    Ellner, J.4
  • 41
    • 0022645060 scopus 로고
    • Direct stimulation of monocyte release of interleukin 1 by mycobacterial protein antigens
    • Wallis R, Fujiwara H, Ellner J. Direct stimulation of monocyte release of interleukin 1 by mycobacterial protein antigens. J Immunol 1986, 136:193-196.
    • (1986) J Immunol , vol.136 , pp. 193-196
    • Wallis, R.1    Fujiwara, H.2    Ellner, J.3
  • 42
    • 34547744976 scopus 로고    scopus 로고
    • Innate immune system regulation of nuclear hormone receptors in metabolic diseases
    • Chow E, Razani B, Cheng G. Innate immune system regulation of nuclear hormone receptors in metabolic diseases. J Leukoc Biol 2007, 82(2):187-195.
    • (2007) J Leukoc Biol , vol.82 , Issue.2 , pp. 187-195
    • Chow, E.1    Razani, B.2    Cheng, G.3
  • 44
    • 0030978909 scopus 로고    scopus 로고
    • The PTPase YopH inhibits uptake of Yersinia, tyrosine phosphorylation of p130Cas and FAK, and the associated accumulation of these proteins in peripheral focal adhesions
    • 10.1093/emboj/16.9.2307, 1169832, 9171345
    • Persson C, Carballeira N, Wolf-Watz H, Fällman M. The PTPase YopH inhibits uptake of Yersinia, tyrosine phosphorylation of p130Cas and FAK, and the associated accumulation of these proteins in peripheral focal adhesions. EMBO J 1997, 16(9):2307-2318. 10.1093/emboj/16.9.2307, 1169832, 9171345.
    • (1997) EMBO J , vol.16 , Issue.9 , pp. 2307-2318
    • Persson, C.1    Carballeira, N.2    Wolf-Watz, H.3    Fällman, M.4
  • 45
    • 0030913232 scopus 로고    scopus 로고
    • Identification of p130Cas as a substrate of Yersinia YopH (Yop51), a bacterial protein tyrosine phosphatase that translocates into mammalian cells and targets focal adhesions
    • 10.1093/emboj/16.10.2730, 1169883, 9184219
    • Black D, Bliska J. Identification of p130Cas as a substrate of Yersinia YopH (Yop51), a bacterial protein tyrosine phosphatase that translocates into mammalian cells and targets focal adhesions. EMBO J 1997, 16(10):2730-2744. 10.1093/emboj/16.10.2730, 1169883, 9184219.
    • (1997) EMBO J , vol.16 , Issue.10 , pp. 2730-2744
    • Black, D.1    Bliska, J.2
  • 46
    • 0033806882 scopus 로고    scopus 로고
    • Cloning and characterization of secretory tyrosine phosphatases of Mycobacterium tuberculosis
    • 10.1128/JB.182.19.5425-5432.2000, 110985, 10986245
    • Koul A, Choidas A, Treder M, Tyagi A, Drlica K, Singh Y, Ullrich A. Cloning and characterization of secretory tyrosine phosphatases of Mycobacterium tuberculosis. J Bacteriol 2000, 182(19):5425-5432. 10.1128/JB.182.19.5425-5432.2000, 110985, 10986245.
    • (2000) J Bacteriol , vol.182 , Issue.19 , pp. 5425-5432
    • Koul, A.1    Choidas, A.2    Treder, M.3    Tyagi, A.4    Drlica, K.5    Singh, Y.6    Ullrich, A.7
  • 48
    • 0032919364 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • 10.1093/nar/27.1.29, 148090, 9847135
    • Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res 1999, 27:29-34. 10.1093/nar/27.1.29, 148090, 9847135.
    • (1999) Nucleic Acids Res , vol.27 , pp. 29-34
    • Ogata, H.1    Goto, S.2    Sato, K.3    Fujibuchi, W.4    Bono, H.5    Kanehisa, M.6
  • 49
    • 0037627408 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis glycosylated phosphatidylinositol causes phagosome maturation arrest
    • 10.1073/pnas.0737613100, 154363, 12702770
    • Fratti RA, Chua J, Vergne I, Deretic V. Mycobacterium tuberculosis glycosylated phosphatidylinositol causes phagosome maturation arrest. Proc Natl Acad Sci 2003, 100(9):5437-5442. 10.1073/pnas.0737613100, 154363, 12702770.
    • (2003) Proc Natl Acad Sci , vol.100 , Issue.9 , pp. 5437-5442
    • Fratti, R.A.1    Chua, J.2    Vergne, I.3    Deretic, V.4
  • 51
    • 0025216480 scopus 로고
    • Phagocytosis of Mycobacterium tuberculosis is mediated by human monocyte complement receptors and complement component C3
    • Schlesinger LS, Bellinger-Kawahara CG, Payne NR, Horwitz MA. Phagocytosis of Mycobacterium tuberculosis is mediated by human monocyte complement receptors and complement component C3. it J Immunol 1990, 144(7):2771-2780.
    • (1990) it J Immunol , vol.144 , Issue.7 , pp. 2771-2780
    • Schlesinger, L.S.1    Bellinger-Kawahara, C.G.2    Payne, N.R.3    Horwitz, M.A.4
  • 52
    • 79251589081 scopus 로고    scopus 로고
    • Profiling early lung immune responses in the mouse model of tuberculosis
    • 10.1371/journal.pone.0016161, 3020951, 21249199
    • Kang DD, Lin Y, Moreno JR, Randall TD, Khader SA. Profiling early lung immune responses in the mouse model of tuberculosis. PloS one 2011, 6:e16161. 10.1371/journal.pone.0016161, 3020951, 21249199.
    • (2011) PloS one , vol.6
    • Kang, D.D.1    Lin, Y.2    Moreno, J.R.3    Randall, T.D.4    Khader, S.A.5
  • 53
    • 84894612810 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis cyclophilin a uses novel signal sequence for secretion and mimics eukaryotic cyclophilins for interaction with host protein repertoire
    • 10.1371/journal.pone.0088090, 3913756, 24505389
    • Bhaduri A, Misra R, Maji A, Bhetaria PJ, Mishra S, Arora G, Singh LK, Dhasmana N, Dubey N, Virdi JS, Singh Y. Mycobacterium tuberculosis cyclophilin a uses novel signal sequence for secretion and mimics eukaryotic cyclophilins for interaction with host protein repertoire. PloS one 2014, 9(2):e88090. 10.1371/journal.pone.0088090, 3913756, 24505389.
    • (2014) PloS one , vol.9 , Issue.2
    • Bhaduri, A.1    Misra, R.2    Maji, A.3    Bhetaria, P.J.4    Mishra, S.5    Arora, G.6    Singh, L.K.7    Dhasmana, N.8    Dubey, N.9    Virdi, J.S.10    Singh, Y.11
  • 54
    • 0036137684 scopus 로고    scopus 로고
    • Rab GTPases, intracellular traffic and disease
    • 10.1016/S1471-4914(01)02227-4, 11796263
    • Seabra MC, Mules EH, Hume AN. Rab GTPases, intracellular traffic and disease. Trends Mol Med 2002, 8:23-30. 10.1016/S1471-4914(01)02227-4, 11796263.
    • (2002) Trends Mol Med , vol.8 , pp. 23-30
    • Seabra, M.C.1    Mules, E.H.2    Hume, A.N.3
  • 55
    • 0036435893 scopus 로고    scopus 로고
    • Activation of JAK2/STAT1- α-dependent signaling events during Mycobacterium tuberculosis-induced macrophage apoptosis
    • 10.1016/S0008-8749(02)00515-4, 12426001
    • Rojas M, Olivier M, Garca LF. Activation of JAK2/STAT1- α-dependent signaling events during Mycobacterium tuberculosis-induced macrophage apoptosis. Cell Immunol 2002, 217:58-66. 10.1016/S0008-8749(02)00515-4, 12426001.
    • (2002) Cell Immunol , vol.217 , pp. 58-66
    • Rojas, M.1    Olivier, M.2    Garca, L.F.3
  • 56
    • 79551474484 scopus 로고    scopus 로고
    • Local pulmonary immunotherapy with siRNA targeting TGF β1 enhances antimicrobial capacity in Mycobacterium tuberculosis infected mice
    • 10.1016/j.tube.2010.11.004, 21195670
    • Rosas-Taraco AG, Higgins DM, Sánchez-Campillo J, Lee EJ, Orme IM, González-Juarrero M. Local pulmonary immunotherapy with siRNA targeting TGF β1 enhances antimicrobial capacity in Mycobacterium tuberculosis infected mice. Tuberculosis 2011, 91:98-106. 10.1016/j.tube.2010.11.004, 21195670.
    • (2011) Tuberculosis , vol.91 , pp. 98-106
    • Rosas-Taraco, A.G.1    Higgins, D.M.2    Sánchez-Campillo, J.3    Lee, E.J.4    Orme, I.M.5    González-Juarrero, M.6
  • 57
    • 84859884162 scopus 로고    scopus 로고
    • Coronin-1a inhibits autophagosome formation around Mycobacterium tuberculosis-containing phagosomes and assists mycobacterial survival in macrophages
    • 10.1111/j.1462-5822.2012.01754.x, 22256790
    • Seto S, Tsujimura K, Koide Y. Coronin-1a inhibits autophagosome formation around Mycobacterium tuberculosis-containing phagosomes and assists mycobacterial survival in macrophages. Cell Microbiol 2012, 14(5):710-727. 10.1111/j.1462-5822.2012.01754.x, 22256790.
    • (2012) Cell Microbiol , vol.14 , Issue.5 , pp. 710-727
    • Seto, S.1    Tsujimura, K.2    Koide, Y.3
  • 58
    • 67949109561 scopus 로고    scopus 로고
    • Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs
    • 10.1186/1755-8794-2-27, 2694829, 19450270
    • Evans P, Dampier W, Ungar L, Tozeren A. Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs. BMC Med Genomics 2009, 2:27. 10.1186/1755-8794-2-27, 2694829, 19450270.
    • (2009) BMC Med Genomics , vol.2 , pp. 27
    • Evans, P.1    Dampier, W.2    Ungar, L.3    Tozeren, A.4
  • 59
    • 84878063939 scopus 로고    scopus 로고
    • " Predatory" online journals lure scholars who are eager to publish
    • Stratford M. " Predatory" online journals lure scholars who are eager to publish. Chron High Educ 2012, [http://chronicle.com/article/Predatory-Online-Journals/131047/].
    • (2012) Chron High Educ
    • Stratford, M.1
  • 60
    • 0030614959 scopus 로고    scopus 로고
    • Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    • Nielsen H, Engelbrecht J, Brunak S, von Heijne G. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 1997, 10:1-6.
    • (1997) Protein Eng , vol.10 , pp. 1-6
    • Nielsen, H.1    Engelbrecht, J.2    Brunak, S.3    von Heijne, G.4
  • 61
    • 0033887456 scopus 로고    scopus 로고
    • Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins
    • 10.1006/bbrc.2000.3000, 10873683
    • Frye RA. Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins. Biochem Biophys Res Commun 2000, 273(2):793-798. 10.1006/bbrc.2000.3000, 10873683.
    • (2000) Biochem Biophys Res Commun , vol.273 , Issue.2 , pp. 793-798
    • Frye, R.A.1
  • 62
    • 0012292773 scopus 로고
    • Detection of prokaryotic signal peptidase in an Escherichia coli membrane fraction: endoproteolytic cleavage of nascent f1 pre-coat protein
    • 10.1073/pnas.75.1.361, 411248, 343108
    • Chang CN, Blobel G, Model P. Detection of prokaryotic signal peptidase in an Escherichia coli membrane fraction: endoproteolytic cleavage of nascent f1 pre-coat protein. Proc Natl Acad Sci 1978, 75:361-365. 10.1073/pnas.75.1.361, 411248, 343108.
    • (1978) Proc Natl Acad Sci , vol.75 , pp. 361-365
    • Chang, C.N.1    Blobel, G.2    Model, P.3
  • 63
    • 0023046815 scopus 로고
    • A new method for predicting signal sequence cleavage sites
    • 10.1093/nar/14.11.4683, 311474, 3714490
    • Von Heijne G. A new method for predicting signal sequence cleavage sites. Nucleic Acids Res 1986, 14(11):4683-4690. 10.1093/nar/14.11.4683, 311474, 3714490.
    • (1986) Nucleic Acids Res , vol.14 , Issue.11 , pp. 4683-4690
    • Von Heijne, G.1
  • 64
    • 0021511573 scopus 로고
    • Analysis of the distribution of charged residues in the N-terminal region of signal sequences: implications for protein export in prokaryotic and eukaryotic cells
    • 557686, 6499832
    • von Heijne G. Analysis of the distribution of charged residues in the N-terminal region of signal sequences: implications for protein export in prokaryotic and eukaryotic cells. EMBO J 1984, 3(10):2315. 557686, 6499832.
    • (1984) EMBO J , vol.3 , Issue.10 , pp. 2315
    • von Heijne, G.1
  • 65
    • 0033061571 scopus 로고    scopus 로고
    • Initiation of translation in prokaryotes and eukaryotes
    • 10.1016/S0378-1119(99)00210-3, 10395892
    • Kozak M. Initiation of translation in prokaryotes and eukaryotes. Gene 1999, 234(2):187-208. 10.1016/S0378-1119(99)00210-3, 10395892.
    • (1999) Gene , vol.234 , Issue.2 , pp. 187-208
    • Kozak, M.1
  • 66
    • 0019050480 scopus 로고
    • Homology between prokaryotic and eukaryotic ribonucleases
    • 10.1007/BF01733142, 7411658
    • Hartley R. Homology between prokaryotic and eukaryotic ribonucleases. J Mol Evol 1980, 15(4):355-358. 10.1007/BF01733142, 7411658.
    • (1980) J Mol Evol , vol.15 , Issue.4 , pp. 355-358
    • Hartley, R.1
  • 67
    • 0018634153 scopus 로고
    • Protein methylation in behavioural control mechanisms and in signal transduction
    • 10.1038/280279a0, 379649
    • Springer MS, Goy MF, Adler J. Protein methylation in behavioural control mechanisms and in signal transduction. Nature 1979, 280(5720):279-284. 10.1038/280279a0, 379649.
    • (1979) Nature , vol.280 , Issue.5720 , pp. 279-284
    • Springer, M.S.1    Goy, M.F.2    Adler, J.3
  • 69
    • 0016417010 scopus 로고
    • Function and regulation of aminoacyl-tRNA synthetases in prokaryotic and eukaryotic cells
    • 10.1146/annurev.mi.29.100175.001243, 1180514
    • Neidhardt FC, Parker J, McKeever W. Function and regulation of aminoacyl-tRNA synthetases in prokaryotic and eukaryotic cells. Annu Rev Microbiol 1975, 29:215-250. 10.1146/annurev.mi.29.100175.001243, 1180514.
    • (1975) Annu Rev Microbiol , vol.29 , pp. 215-250
    • Neidhardt, F.C.1    Parker, J.2    McKeever, W.3
  • 70
    • 0018277518 scopus 로고
    • Origins of prokaryotes, eukaryotes, mitochondria, and chloroplasts
    • 10.1126/science.202030, 202030
    • Schwartz RM, Dayhoff MO. Origins of prokaryotes, eukaryotes, mitochondria, and chloroplasts. Science 1978, 199(4327):395-403. 10.1126/science.202030, 202030.
    • (1978) Science , vol.199 , Issue.4327 , pp. 395-403
    • Schwartz, R.M.1    Dayhoff, M.O.2
  • 72
    • 0031954925 scopus 로고    scopus 로고
    • Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
    • 2143985, 9568909
    • Wallin E, Heijne GV. Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms. Protein Sci 1998, 7(4):1029-1038. 2143985, 9568909.
    • (1998) Protein Sci , vol.7 , Issue.4 , pp. 1029-1038
    • Wallin, E.1    Heijne, G.V.2
  • 73
    • 0037040541 scopus 로고    scopus 로고
    • Molecular chaperones in the cytosol: from nascent chain to folded protein
    • 10.1126/science.1068408, 11884745
    • Hartl FU, Hayer-Hartl M. Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 2002, 295(5561):1852-1858. 10.1126/science.1068408, 11884745.
    • (2002) Science , vol.295 , Issue.5561 , pp. 1852-1858
    • Hartl, F.U.1    Hayer-Hartl, M.2
  • 74
    • 0037180757 scopus 로고    scopus 로고
    • Inflammation and cancer
    • 10.1038/nature01322, 2803035, 12490959
    • Coussens LM, Werb Z. Inflammation and cancer. Nature 2002, 420(6917):860-867. 10.1038/nature01322, 2803035, 12490959.
    • (2002) Nature , vol.420 , Issue.6917 , pp. 860-867
    • Coussens, L.M.1    Werb, Z.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.