Endophytic nitrogen-fixing Klebsiella variicola strain DX120E promotes sugarcane growth

Biology and Fertility of Soils

Volumn 50, Issue 4, 2014, Pages 657-666

  Wei, Chun Yan ^a   Lin, Li ^a,b,c,d,e,f   Luo, Li Jing ^a   Xing, Yong Xiu ^a   Hu, Chun Jin ^b,c,d,e,f   Yang, Li Tao ^a   Li, Yang Rui ^a,b,c,d,e,f   An, Qianli ^g  

^a GUANGXI UNIVERSITY   (China)

^b AGRO ENVIRONMENTAL PROTECTION INSTITUTE   (China)

^c Guangxi Key Laboratory of Sugarcane Genetic Improvement   (China)

^d Guangxi Crop Genetic Improvement and Biotechnology Lab   (China)

^e INSTITUTE OF PLANT PROTECTION   (China)

^f Guangxi Academy of Sciences   (China)

^g ZHEJIANG UNIVERSITY   (China)

Author keywords

Colonization; Endophytic bacteria; Klebsiella variicola; Nitrogen fixation; Plant growth promoting bacteria; Sugarcane

Indexed keywords

BACTERIUM; COLONIZATION; CULTIVAR; ENDOPHYTE; GROWTH RATE; NITROGEN FIXATION; NUTRIENT UPTAKE; PHYLOGENETICS; SUGAR CANE;

BACTERIA (MICROORGANISMS); KLEBSIELLA; KLEBSIELLA VARIICOLA;

EID: 84899476442     PISSN: 01782762     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00374-013-0878-3     Document Type: Article

References (45)

1. An Q, Kuang B, Mu X, Li JD (1999) Colonization and nitrogenase production by Klebsiella oxytoca SA2 in rice roots. Prog Nat Sci 9: 1262-1268.
2. An Q, Dong Y, Wang W, Li Y, Li J (2007) Constitutive expression of the nifA gene activates associative nitrogen fixation of Enterobacter gergoviae 57-7, an opportunistic endophytic diazotroph. J Appl Microbiol 103: 613-620.
3. An Q, Yang X, Feng L, Mao B, Kuang B, Li J (2010) Using orthogonal sectioning with a laser scanning confocal microscopic system to determine endophytic colonization of plant roots by GFP-tagged bacteria. J Chin Electr Microsc Soc 29: 354-360.
4. Baldani JI, Baldani VLD (2005) History on the biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience. Ann Brazil Acad Sci 77: 549-579.
5. Bao S-D (2000) Soil and agricultural chemistry analysis, 3rd edn. China Agriculture Press, Beijing, pp 263-271.
6. Barret M, Morrissey JP, O'Gara F (2011) Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence. Biol Fertil Soils 47: 729-743.
7. Bashan Y, Kamnev AA, de-Bashan LE (2013) Tricalcium phosphate is inappropriate as a universal selection factor for isolating and testing phosphate-solubilizing bacteria that enhance plant growth: a proposal for an alternative procedure. Biol Fetil Soils 49: 465-479.
8. Compant S, Clément C, Sessitsch A (2010) Plant growth-promoting bacteria in the rhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil Biol Biochem 42: 669-678.
9. de Santi Ferrara FI, Oliveira ZM, Gonzales HHS, Floh EIS, Barbosa HR (2012) Endophytic and rhizospheric enterobacteria isolated from sugar cane have different potentials for producing plant growth-promoting substances. Plant Soil 353: 409-417.
10. Döbereiner J (1992) History and new perspectives of diazotrophs in association with non-leguminous plants. Symbiosis 13: 1-13.
11. 2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice. PLoS Genet 4(7): e1000141.
12. Govindarajan M, Kwon S-W, Weon H-Y (2007) Isolation, molecular characterization and growth-promoting activities of endophytic sugarcane diazotroph Klebsiella sp. GR9. World J Microbiol Biotechnol 23: 997-1006.
13. Haahtela K, Laakso T, Korhonen TK (1986) Associative nitrogen fixation by Klebsiella spp.: adhesion sites and inoculation effects on grass roots. Appl Environ Microbiol 52: 1074-1079.
14. Iniguez AL, Dong Y, Triplett EW (2004) Nitrogen fixation in wheat provided by Klebsiella pneumonia 342. Mol Plant Microbe Interact 17: 1078-1085.
15. James EK (2000) Nitrogen fixation in endophytic and associative symbiosis. Field Crops Res 65: 197-209.
16. James EK, Reis VM, Olivares FL, Boiardi JI, Döbereiner J (1994) Infection of sugarcane by the nitrogen-fixing bacterium Acetobacter diazotrophicus. J Exp Bot 45: 757-766.
17. James EK, Gyaneshwar P, Mathan N, Barraquio WL, Reddy PM, Iannetta PPM, Olivares FL, Ladha JK (2002) Infection and colonization of rice seedlings by the plant growth-promoting bacterium Herbaspirillum seropedicae Z67. Mol Microbe Plant Interact 15: 894-906.
18. Kovtunovych G, Lar O, Kamalova S, Kordyum V, Kleiner D, Kozyrovska N (1999) Correlation between pectate lyase activity and ability of diazotrophic Klebsiella oxytoca VN13 to penetrate into plant tissues. Plant Soil 215: 1-6.
19. Li Y-R (2010) Current knowledge of sugarcane. Chinese Agriculture Publishing, Beijing.
20. 15N-aided nitrogen balance. Soil Biol Biochem 19: 165-170.
21. 2 associated with micropropagated sugarcane plants. Appl Microbiol Biotechnol 93: 1185-1195.
22. Lin L, Li Z, Hu C, Zhang X, Chang S, Yang L, Li Y, An Q (2012b) Plant growth-promoting nitrogen-fixing enterobacteria are in association with sugarcane plants growing in Guangxi, China. Microbes Environ 27: 391-398.
23. Lindow SE, Brandl MT (2003) Microbiology of the phyllosphere. Appl Environ Microbiol 69: 1875-1883.
24. 15N isotope dilution technique. J Nucl Agric Sci 24: 1026-1031.
25. Magnani GS, Didonet CM, Cruz LM, Picheth CF, Pedrosa FO, Souza EM (2010) Diversity of endophytic bacteria in Brazilian sugarcane. Genet Mol Res 9: 250-258.
26. Mehnaz S, Baig DN, Lazarovits G (2010) Genetic and phenotypic diversity of plant growth promoting rhizobacteria isolated from sugarcane plants growing in Pakistan. J Microbiol Biotechnol 20: 1614-1623.
27. Mirza MS, Ahmad W, Latif F, Haurat J, Bally R, Normand P, Malik KA (2001) Isolation, partial characterization, and the effect of plant growth-promoting bacteria (PGPB) on micropropagated sugarcane in vitro. Plant Soil 237: 47-54.
28. Oliveira ALM, Stoffels M, Schmid M, Reis VM, Baldani JI, Hartmann A (2009) Colonization of sugarcane plantlets by mixed inoculations with diazotrophic bacteria. Eur J Soil Biol 45: 106-113.
29. Pinto-Tomás AA, Anderson MA, Suen G, Stevenson DM, Chu FS, Cleland WW, Weimer PJ, Currie CR (2009) Symbiotic nitrogen fixation in the fungus gardens of leaf-cutter ants. Science 326: 1120-1123.
30. Podschun R, Ullmann U (1998) Klebsiella spp. as nosocomial pathogens: epidemiology, taxonomy, typing methods, and pathogenicity factors. Clin Microbiol Rev 11: 589-603.
31. Quecine MC, Araújo WL, Rossetto PB, Ferreira A, Tsui S, Lacava PT, Mondin M, Azevedo JL, Pizzirani-Kleiner AA (2012) Sugarcane growth promotion by the endophytic bacterium Pantoea agglomerans 33. 1. Appl Environ Microbiol 78: 7511-7518.
32. Reis VM, Olivares FL, Oliveira ALM, dos Reis FB, Baldani JI Jr, Döbereiner J (1999) Technical approaches to inoculate micropropagated sugarcane plants with Acetobacter diazotrophicus. Plant Soil 206: 205-211.
33. Rosenblueth M, Martínez-Romero E (2006) Bacterial endophytes and their interactions with hosts. Mol Plant Microbe Interact 19: 827-837.
34. Rosenblueth M, Martínez L, Silva J, Martínez-Romero E (2004) Klebsiella variicola, a novel species with clinical and plant-associated isolates. System Appl Microbiol 27: 27-35.
35. Santi C, Bogusz D, Franche C (2013) Biological nitrogen fixation in non-legume plants. Ann Bot 111: 743-767.
36. Stoltzfus JR, So R, Malarvithi PP, Ladha JK, de Bruijn FJ (1997) Isolation of endophytic bacteria from rice and assessment of their potential for supplying rice with biologically fixed nitrogen. Plant Soil 194: 25-36.
37. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
38. Tanaka K, Shimizu T, Zakria M, Njoloma J, Saeki Y, Sakai M, Yamakawa T, Minamisawa K, Akao S (2006) Incorporation of a DNA sequence encoding green fluorescent protein (GFP) into endophytic diazotroph from sugarcane and sweet potato and the colonizing ability of these bacteria in Brassica oleracea. Microbes Environ 21: 122-128.
39. Taulé C, Mareque C, Barlocco C, Hackembruch F, Reis VM, Sicardi M, Battistoni F (2012) The contribution of nitrogen fixation to sugarcane (Saccharum officinarum L.), and the identification and characterization of part of the associated diazotrophic bacterial community. Plant Soil 356: 35-49.
40. Urquiaga S, Cruz KHS, Boddey RM (1992) Contribution of nitrogen fixation to sugar cane: nitrogen-15 and nitrogen-balance estimates. Soil Sci Soc Am J 56: 105-114.
41. 2 fixation to Brazilian sugarcane varieties. Plant Soil 356: 5-21.
42. Wang LW, Li YR, He WZ, Xian W, Liang J, Tan YM (2007) The detection of activity for endophytic nitrogen fixing bacteria in sugarcane (Saccharum officinarum L.) by stem apical culture seedlings. Plant Physiol Commun 43: 65-68.
43. Webster G, Gough C, Vasse J, Batchelor CA, O'Callaghan KJ, Kothari SL, Davey MR, Dénarié J, Cocking EC (1997) Interactions of rhizobia with rice and wheat. Plant Soil 194: 115-122.
44. Zakria M, Udonishi K, Ogawa T, Yamamoto A, Saeki Y, Akao S (2008a) Influence of inoculation technique on the endophytic colonization of rice by Pantoea sp. isolated from sweet potato and by Enterobacter sp. isolated from sugarcane. Soil Sci Plant Nutr 54: 224-236.
45. Zakria M, Udonishi K, Saeki Y, Yamamoto A, Akao S (2008b) Infection, multiplication and evaluation of the nitrogen-fixing ability of Herbaspirillum sp. strain B501gfp1 in sugarcane stems inoculated by the vacuum infiltration method. Microbes Environ 23: 128-133.