메뉴 건너뛰기




Volumn 20, Issue 12, 2010, Pages 1614-1623

Genetic and phenotypic diversity of plant growth promoting rhizobacteria isolated from sugarcane plants growing in Pakistan

Author keywords

Azospirillum; Enterobacter; Klebsiella; Pseudomonads; Rhizobium; Sugarcane

Indexed keywords

ACETYLENE; BACTERIAL RNA; CELLULASE; CHITINASE; DEAMINASE; HOMOSERINE LACTONE; INDOLEACETIC ACID; LACTONE DERIVATIVE; PHOSPHATE; POLYGALACTURONASE; PROTEINASE; RNA 16S; SIDEROPHORE; SODIUM CHLORIDE; TRIACYLGLYCEROL LIPASE; TRYPTOPHAN; UNCLASSIFIED DRUG;

EID: 78650851460     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: 10.4014/jmb.1005.05014     Document Type: Article
Times cited : (87)

References (40)
  • 1
    • 0038497512 scopus 로고    scopus 로고
    • Endophytic nitrogen fixation in sugarcane: Present knowledge and future application
    • Boddey, R. M., S. Urquiaga, B. J. R. Alves, and V. Reis. 2003. Endophytic nitrogen fixation in sugarcane: Present knowledge and future application. Plant Soil 252: 139-149.
    • (2003) Plant Soil , vol.252 , pp. 139-149
    • Boddey, R.M.1    Urquiaga, S.2    Alves, B.J.R.3    Reis, V.4
  • 2
    • 0002563277 scopus 로고
    • A new acid tolerant nitrogen fixing bacterium associated with sugarcane
    • Cavalcante, V. A. and J. Dobereiner. 1988. A new acid tolerant nitrogen fixing bacterium associated with sugarcane. Plant Soil 108: 23-31.
    • (1988) Plant Soil , vol.108 , pp. 23-31
    • Cavalcante, V.A.1    Dobereiner, J.2
  • 3
    • 0141704522 scopus 로고    scopus 로고
    • Isolation and identification of actinobacteria from surface sterilized wheat roots
    • Coombs, J. T. and C. M. M. Franco. 2003. Isolation and identification of actinobacteria from surface sterilized wheat roots. Appl. Environ. Microbiol. 69: 5603-5608.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 5603-5608
    • Coombs, J.T.1    Franco, C.M.M.2
  • 4
    • 0033300486 scopus 로고    scopus 로고
    • Bacteria isolated from a sugarcane agroecosystem: Their potential production of polyhydroxyalcanoates and resistance to antibiotics
    • De Lima, T. C. S., B. M. Grisi, and M. C. M. Bonato. 1999. Bacteria isolated from a sugarcane agroecosystem: Their potential production of polyhydroxyalcanoates and resistance to antibiotics. Rev. Microbiol. 30: 214-224.
    • (1999) Rev. Microbiol , vol.30 , pp. 214-224
    • de Lima, T.C.S.1    Grisi, B.M.2    Bonato, M.C.M.3
  • 6
    • 0001394981 scopus 로고
    • Experiments with some micro-organisms which utilize ethane and hydrogen
    • Dworkin, M. and J. Foster. 1958. Experiments with some micro-organisms which utilize ethane and hydrogen. J. Bacteriol. 75: 592-601.
    • (1958) J. Bacteriol , vol.75 , pp. 592-601
    • Dworkin, M.1    Foster, J.2
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 9
    • 33645463746 scopus 로고    scopus 로고
    • Identification of Campylobacter spp. and discrimination from Helicobacter and Arcobacter spp. by direct sequencing of PCR-amplified cpn60 sequences and comparison to cpnDB, a chaperonin reference sequence database
    • Hill, J. E., A. Paccagnella, K. Law, P. L. Melito, D. L. Woodward, L. Price, et al. 2006. Identification of Campylobacter spp. and discrimination from Helicobacter and Arcobacter spp. by direct sequencing of PCR-amplified cpn60 sequences and comparison to cpnDB, a chaperonin reference sequence database. J. Med. Microbiol. 55: 393-399.
    • (2006) J. Med. Microbiol , vol.55 , pp. 393-399
    • Hill, J.E.1    Paccagnella, A.2    Law, K.3    Melito, P.L.4    Woodward, D.L.5    Price, L.6
  • 10
    • 43349086724 scopus 로고
    • Two simple media for the demonstration of pyocyanin and fluorescin
    • King, E. O., M. K. Ward, and D. E. Raney. 1954. Two simple media for the demonstration of pyocyanin and fluorescin. J. Lab. Clin. Med. 44: 301-307.
    • (1954) J. Lab. Clin. Med , vol.44 , pp. 301-307
    • King, E.O.1    Ward, M.K.2    Raney, D.E.3
  • 11
    • 67651089695 scopus 로고    scopus 로고
    • Role of metal resistant plant growth promoting bacteria in ameliorating fly ash to the growth of Brassica juncea
    • Kumar, K. V., S. Srivastava, N. Singh, and H. M. Behl. 2009. Role of metal resistant plant growth promoting bacteria in ameliorating fly ash to the growth of Brassica juncea. J. Haz. Mat. 170: 51-57.
    • (2009) J. Haz. Mat , vol.170 , pp. 51-57
    • Kumar, K.V.1    Srivastava, S.2    Singh, N.3    Behl, H.M.4
  • 12
    • 12344292435 scopus 로고    scopus 로고
    • Characterization of antifungal metabolite produced by a new strain Pseudomonas aeruginosa PUPa3 that exhibits broad spectrum antifungal activity and biofertilizing traits
    • Kumar, R. S., N. Ayyadurai, P. Pandiaraja, A. V. Reddy, Y. Venkatesvarlu, O. Prsakash, and N. Sakthivel. 2005. Characterization of antifungal metabolite produced by a new strain Pseudomonas aeruginosa PUPa3 that exhibits broad spectrum antifungal activity and biofertilizing traits. J. Appl. Microbiol. 98: 145-154.
    • (2005) J. Appl. Microbiol , vol.98 , pp. 145-154
    • Kumar, R.S.1    Ayyadurai, N.2    Pandiaraja, P.3    Reddy, A.V.4    Venkatesvarlu, Y.5    Prsakash, O.6    Sakthivel, N.7
  • 15
    • 33745060479 scopus 로고    scopus 로고
    • Inoculation effects of Pseudomonas putida, Gluconaacetobacter azotocaptans and Azospirillum lipoferum on corn plant growth under green house conditions
    • Mehnaz, S. and G. Lazarovits. 2006. Inoculation effects of Pseudomonas putida, Gluconaacetobacter azotocaptans and Azospirillum lipoferum on corn plant growth under green house conditions. Microb. Ecol. 51: 326-335.
    • (2006) Microb. Ecol , vol.51 , pp. 326-335
    • Mehnaz, S.1    Lazarovits, G.2
  • 16
    • 74749094110 scopus 로고    scopus 로고
    • Characterization of a phenazine and hexanoyl homoserine lactone producing Pseudomonas aurantiaca strain PB-St2, isolated from sugarcane stem
    • Mehnaz, S., D. N. Baig, F. Jamil, B. Weselowski, and G. Lazarovits. 2009. Characterization of a phenazine and hexanoyl homoserine lactone producing Pseudomonas aurantiaca strain PB-St2, isolated from sugarcane stem. J. Microbiol. Biotechnol. 19: 1688-1694.
    • (2009) J. Microbiol. Biotechnol , vol.19 , pp. 1688-1694
    • Mehnaz, S.1    Baig, D.N.2    Jamil, F.3    Weselowski, B.4    Lazarovits, G.5
  • 17
    • 69249137003 scopus 로고    scopus 로고
    • Isolation, characterization and effect of fluorescent pseudomonads on micropropagated sugarcane
    • Mehnaz, S., B. Weselowski, F. A. Mufti, S. Zahid, G. Lazarovits, and J. Iqbal. 2009. Isolation, characterization and effect of fluorescent pseudomonads on micropropagated sugarcane. Can. J. Microbiol. 55: 1007-1011.
    • (2009) Can. J. Microbiol , vol.55 , pp. 1007-1011
    • Mehnaz, S.1    Weselowski, B.2    Mufti, F.A.3    Zahid, S.4    Lazarovits, G.5    Iqbal, J.6
  • 18
    • 0035099750 scopus 로고    scopus 로고
    • Isolation and 16S rRNA sequence analysis of beneficial bacteria from the rhizosphere of rice
    • Mehnaz, S., M. S. Mirza, J. Haurat, R. Bally, P. Normand, A. Bano, and K. A. Malik. 2001. Isolation and 16S rRNA sequence analysis of beneficial bacteria from the rhizosphere of rice. Can. J. Microbiol. 47: 110-117.
    • (2001) Can. J. Microbiol , vol.47 , pp. 110-117
    • Mehnaz, S.1    Mirza, M.S.2    Haurat, J.3    Bally, R.4    Normand, P.5    Bano, A.6    Malik, K.A.7
  • 19
    • 0001105694 scopus 로고
    • Association of cyanide with infection of birdsfoot trefoil by St emphyl ium loti
    • Miller, R. L. and V. J. Higgins. 1970. Association of cyanide with infection of birdsfoot trefoil by St emphyl ium loti. Phytopathology 60: 104-110.
    • (1970) Phytopathology , vol.60 , pp. 104-110
    • Miller, R.L.1    Higgins, V.J.2
  • 20
    • 0035703429 scopus 로고    scopus 로고
    • Isolation, partial characterization and the effect of plant growth promoting bacteria on micropropagated sugarcane in vitro
    • Mirza, M. S., W. Ahmed, F. Latif, J. Haurat, R. Bally, P. Normand, and K. A. Malik. 2001. Isolation, partial characterization and the effect of plant growth promoting bacteria on micropropagated sugarcane in vitro. Plant Soil 237: 47-54.
    • (2001) Plant Soil , vol.237 , pp. 47-54
    • Mirza, M.S.1    Ahmed, W.2    Latif, F.3    Haurat, J.4    Bally, R.5    Normand, P.6    Malik, K.A.7
  • 21
    • 0032932907 scopus 로고    scopus 로고
    • An efficient microbiological growth medium for screening phosphate solubilizing microorganisms
    • Nautiyal, C. S. 1999. An efficient microbiological growth medium for screening phosphate solubilizing microorganisms. FEMS Microbiol. Lett. 170: 265-270.
    • (1999) FEMS Microbiol. Lett , vol.170 , pp. 265-270
    • Nautiyal, C.S.1
  • 22
    • 0000567959 scopus 로고
    • A re-evaluation of nitrogen assimilation in roots
    • Oak, A. 1992. A re-evaluation of nitrogen assimilation in roots. Bioscience 42: 103-111.
    • (1992) Bioscience , vol.42 , pp. 103-111
    • Oak, A.1
  • 23
    • 85047679434 scopus 로고    scopus 로고
    • Occurrence of the endophytic diazaotrophs Herbaspirillum spp. in roots, stems and leaves predominantly of Gramineae
    • Olivares, F. L., V. L. D. Baldani, V. M. Reis, J. I. Baldani, and J. Dobereiner. 1996. Occurrence of the endophytic diazaotrophs Herbaspirillum spp. in roots, stems and leaves predominantly of Gramineae. Biol. Fertil. Soils 2: 197-200.
    • (1996) Biol. Fertil. Soils , vol.2 , pp. 197-200
    • Olivares, F.L.1    Baldani, V.L.D.2    Reis, V.M.3    Baldani, J.I.4    Dobereiner, J.5
  • 24
    • 15744393219 scopus 로고    scopus 로고
    • Isolation and characterization of diazotrophic growth promoting bacteria from rhizosphere of agricultural crops of Korea
    • Park, M., C. Kim, J. Yang, H. Lee, W. Shin, S. Kim, and T. Sa. 2005. Isolation and characterization of diazotrophic growth promoting bacteria from rhizosphere of agricultural crops of Korea. Microb. Res. 160: 127-133.
    • (2005) Microb. Res , vol.160 , pp. 127-133
    • Park, M.1    Kim, C.2    Yang, J.3    Lee, H.4    Shin, W.5    Kim, S.6    Sa, T.7
  • 25
    • 0038402571 scopus 로고    scopus 로고
    • Methods for isolating and characterizing ACC deaminase containing plant growth promoting rhizobacteria
    • Penrose, D. M. and B. R. Glick. 2003. Methods for isolating and characterizing ACC deaminase containing plant growth promoting rhizobacteria. Physiol. Plant 118: 10-15.
    • (2003) Physiol. Plant , vol.118 , pp. 10-15
    • Penrose, D.M.1    Glick, B.R.2
  • 26
    • 0035135437 scopus 로고    scopus 로고
    • Determination of 1-aminocyclopropane-1-carboxylic acid (ACC) to assess the effects of ACC deaminase-containing bacteria on roots of canola seedlings
    • Penrose, D. M., B. A. Moffat, and B. R. Glick. 2001. Determination of 1-aminocyclopropane-1-carboxylic acid (ACC) to assess the effects of ACC deaminase-containing bacteria on roots of canola seedlings. Can. J. Microbiol. 47: 77-80.
    • (2001) Can. J. Microbiol , vol.47 , pp. 77-80
    • Penrose, D.M.1    Moffat, B.A.2    Glick, B.R.3
  • 28
  • 29
    • 0019461152 scopus 로고
    • A single medium for the isolation of nitrogen fixing bacteria
    • Renni, R J. 1981. A single medium for the isolation of nitrogen fixing bacteria. Can. J. Microbiol. 27: 8-14.
    • (1981) Can. J. Microbiol , vol.27 , pp. 8-14
    • Renni, R.J.1
  • 30
    • 0031931483 scopus 로고    scopus 로고
    • Phenotypic and genetic diversity of Penibacillus azotofixans strains isolated from the rhizoplane soil of different grasses
    • Rosado, A. S., F. S. de Azevedo, D. W. da Cruz, J. D. Va n Elsa, and L. Seldin. 1998. Phenotypic and genetic diversity of Penibacillus azotofixans strains isolated from the rhizoplane soil of different grasses. J. Appl. Microbiol. 84: 216-226.
    • (1998) J. Appl. Microbiol , vol.84 , pp. 216-226
    • Rosado, A.S.1    de Azevedo, F.S.2    da Cruz, D.W.3    Van Elsa, J.D.4    Seldin, L.5
  • 31
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 32
    • 34548559508 scopus 로고    scopus 로고
    • Perspective of plant growth promoting rhizobacteria (PGPR) containing ACC deaminase in stress agriculture
    • Saleem, M., M. Arshad, S. Hussain, and A. S. Bhatti. 2007. Perspective of plant growth promoting rhizobacteria (PGPR) containing ACC deaminase in stress agriculture. J. Ind. Microbiol. Biotechnol. 34: 635-648.
    • (2007) J. Ind. Microbiol. Biotechnol , vol.34 , pp. 635-648
    • Saleem, M.1    Arshad, M.2    Hussain, S.3    Bhatti, A.S.4
  • 33
    • 34247346884 scopus 로고    scopus 로고
    • ACC deaminase from Pseudomonas fluorescens mediated saline resistance in groundnut (Arachis hypogea) plants
    • Saravanakumar, D. and R. Samiyappan. 2007. ACC deaminase from Pseudomonas fluorescens mediated saline resistance in groundnut (Arachis hypogea) plants. J. Appl. Microbiol. 102: 1283-1292.
    • (2007) J. Appl. Microbiol , vol.102 , pp. 1283-1292
    • Saravanakumar, D.1    Samiyappan, R.2
  • 34
    • 49449116205 scopus 로고    scopus 로고
    • Improvement of soil physical and chemical properties with compost application in rice-wheat cropping system
    • Sarwar, G., H. Schmeisky, N. Hussain, S. Muhammad, M. Ibrahim, and E. Safdar. 2008. Improvement of soil physical and chemical properties with compost application in rice-wheat cropping system. Pak. J. Bot. 40: 275-282.
    • (2008) Pak. J. Bot , vol.40 , pp. 275-282
    • Sarwar, G.1    Schmeisky, H.2    Hussain, N.3    Muhammad, S.4    Ibrahim, M.5    Safdar, E.6
  • 35
    • 0023127806 scopus 로고
    • Universal chemical assay for the detection and determination of siderophores
    • Schwyn, B. and J. B. Neilands. 1987. Universal chemical assay for the detection and determination of siderophores. Anals Biochem. 160: 46-56.
    • (1987) Anals Biochem , vol.160 , pp. 46-56
    • Schwyn, B.1    Neilands, J.B.2
  • 36
    • 51249194274 scopus 로고
    • A simple method for the detection of lipolytic activity of micro-organisms and some observations on the influence of the contact between cells and fatty acid substrates
    • Sierra, G. 1957. A simple method for the detection of lipolytic activity of micro-organisms and some observations on the influence of the contact between cells and fatty acid substrates. Antonie van Leeuvenhoek 23: 15-22.
    • (1957) Antonie Van Leeuvenhoek , vol.23 , pp. 15-22
    • Sierra, G.1
  • 37
    • 3342920601 scopus 로고    scopus 로고
    • Prospects for inferring very large phylogenies by using the neighbor-joining method
    • Tamura, K., M. Nei, and S. Kumar. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. USA. 101: 11030-11035.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 11030-11035
    • Tamura, K.1    Nei, M.2    Kumar, S.3
  • 38
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
    • (2007) Mol. Biol. Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 39
    • 0001575474 scopus 로고
    • Plant growth substances produced by Azospirillum brasilense and their effect on the growth of Pearl Millet (Pennisetum americanum L.)
    • Tien, T. M., M. H. Gaskins, and D. H. Hubbel. 1979. Plant growth substances produced by Azospirillum brasilense and their effect on the growth of Pearl Millet (Pennisetum americanum L.). Appl. Environ. Microbiol. 37: 1016-1027.
    • (1979) Appl. Environ. Microbiol , vol.37 , pp. 1016-1027
    • Tien, T.M.1    Gaskins, M.H.2    Hubbel, D.H.3
  • 40
    • 22544458519 scopus 로고    scopus 로고
    • Azospirillum oryzae sp. nov., a nitrogen-fixing bacterium isolated from the roots of the rice plant Oryza sativa
    • Xie, C. H. and A. Yokota. 2005. Azospirillum oryzae sp. nov., a nitrogen-fixing bacterium isolated from the roots of the rice plant Oryza sativa. Int. J. Syst. Evol. Bacteriol. 55: 1435-1438.
    • (2005) Int. J. Syst. Evol. Bacteriol , vol.55 , pp. 1435-1438
    • Xie, C.H.1    Yokota, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.