Endophytic and rhizospheric enterobacteria isolated from sugar cane have different potentials for producing plant growth-promoting substances

Plant and Soil

Volumn 353, Issue 1-2, 2012, Pages 409-417

  de Santi Ferrara, Felipe Ibañez ^a   Oliveira, Zilda Machado ^a   Gonzales, Hebert Hernan Soto ^a   Floh, Eny Iochevet Segal ^a   Barbosa, Heloiza Ramos ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

Amino acid excretion; Biocontrol; Endophytic bacteria; Enterobacteriaceae; Phytohormone; Rhizobacteria

Indexed keywords

ADAPTATION; AMINO ACID; BACTERIUM; BIOLOGICAL CONTROL; ENDOPHYTE; FUNGUS; HORMONE; MICROBIAL COMMUNITY; PRISTINE ENVIRONMENT; RHIZOSPHERE; SOIL MICROORGANISM; SUGAR CANE; TAXONOMY;

BACTERIA (MICROORGANISMS); ENTEROBACTER; ENTEROBACTERIACEAE; FUNGI; KLEBSIELLA; RHIZOBIALES; SACCHARUM;

EID: 84858340801     PISSN: 0032079X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11104-011-1042-1     Document Type: Article

References (58)

1. Ahmad F, Ahmad I, Khan MS (2008) Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res 163: 173-181.
2. Alves BJR, Boddey RM, Urquiaga S (2003) The success of BNF in soybean in Brazil. Plant Soil 252: 1-9.
3. Araújo WL, Marcon J, Maccheroni W Jr, van Elsas JD, van Vuurde JWL, Azevedo JL (2002) Diversity of endophytic bacterial populations and their interation with Xylella fastidiosa in citrus plants. Appl Environ Microbiol 68: 4906-4914.
4. Astarita LV, Floh EIS, Handro W (2003) Changes in IAA, tryptophan and activity of soluble peroxidase associated with zygotic embryogenesis in Araucaria angustifolia (Brazilian pine). Plant Growth Regul 39: 113-118.
5. Backman PA, Sikora RA (2008) Endophytes: an emerging tool for biological control. Biol Control 46: 1-3.
6. Berg G (2009) Plant-microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture. Appl Microbiol Biotechnol 84: 11-18.
7. Brimecombe MJ, De Lelj FA, Lynch JM (2001) The effect of root exudates on rhizosphere microbial populations. In: Pinton R, Varanini Z, Nannipieri P (eds) The rhizosphere. Biochemistry and organic substances at the soil-plant interface. Dekker, New York, pp 95-140.
8. Chanway CP, Shishido M, Nairn J, Jungwirth S, Markham J, Xiao G, Holl FB (2000) Endophytic colonization and field response of hybrid spruce seedlings after inoculation with plant growth-promoting rhizobacteria. For Ecol Manag 133: 81-88.
9. Chelius MK, Triplett EW (2000) Immunolocalization of Dinitrogenase Reductase Produced by Klebsiella pneumoniae in Association with Zea mays. Lett Appl Environ Microbiol 66: 783-787.
10. Compant S, Reiter B, Sessitsch A, Nowak J, Clément C, Ait-Barka E (2005) Endophytic colonization of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN. Appl Environ Microbiol 71: 1685-1693.
11. Dobbelaere S, Croonenborghs A, Thys A, van de Broek A, Vanderleyden J (1999) Phytostimulatory effect of Azospirillum brasilense wild type and mutant strains altered in IAA production on wheat. Plant Soil 212: 155-164.
12. Döbereiner J (1980) Forage grasses and grain crops. In: Bergersen FJ (ed) Methods for evaluating biological nitrogen. Wiley, New York, pp 535-555.
13. Donate-Correa J, Barrios ML, Galdona RP (2004) Screening for plant growth-promoting rhizobacteria in Chamaecytisus proliferus (tagasaste), a forage tree-shrub legume endemic to the Canary Islands. Plant Soil 266: 75-84.
14. Fageria NK, Stone LF (2006) Physical, chemical, and biological changes in the rhizosphere and nutrient availability. J Plant Nutr 29: 1327-1356.
15. Glick BR, Cheng Z, Czarny J, Duan J (2007) Promotion of plant growth by ACC deaminase-producing soil bacteria. Eur J Plant Pathol 119: 329-339.
16. Govindarajan M, Kwon SW, Weon HY (2007) Isolation, molecular characterization and growth-promoting activities of endophytic sugarcane diazotroph Klebsiella sp. GR9. World J Microbiol Biotechnol 23: 997-1006.
17. Govindarajan M, Balandreau J, Kwon SW, Weon HY, Lakshminarasimhan C (2008) Effects of the inoculation of Burkholderia vietnamensis and related endophytic diazotrophic Bacteria on grain yield of rice. Microb Ecol 55: 21-37.
18. Grichko VP, Glick BR (2001) Ethylene and flooding stress in plant. Plant Physiol Biochem 39: 1-9.
19. Gyaneshwar P, James EK, Mathan N, Reddy PM, Reinhold-Hurek B, Ladha JK (2001) Endophytic colonization of rice by a diazotrophic strain of Serratia marcescens. J Bacteriol 183: 2634-2645.
20. Hallmann J, Berg B (2007) Spectrum and population dynamics of bacterial root endophytes. In: Schulz BJE, Boyle CJC, Sieber TN (eds) Microbial root endophytes. Springer, Berlin, pp 15-31.
21. Han J, Sun L, Dong X, Cai Z, Yang H, Wang Y, Song W (2005) Characterization of a novel plant growth-promoting bacteria strain Delftia tsuruhatensis HR4 both as a diazotroph and a potential biocontrol agent against various pathogens. Syst Appl Microbiol 28: 66-76.
22. Iniguez AL, Dong Y, Triplett EW (2004) Nitrogen fixation in wheat provided by Klebsiella pneumoniae 342. Mol Plant Microbe Interact 17: 1078-1085.
23. James EK (2000) Nitrogen fixation in endophytic and associative symbiosis. Field Crop Res 65: 197-209.
24. Jorquera MA, Hernández MT, Rengel Z, Marschner P, Mora ML (2008) Isolation of culturable phosphobacteria with both phytate-mineralization and phosphate-solubilization activity from the rhizosphere of plants grown in a volcanic soil. Biol Fertil Soils 44: 1025-1034.
25. Karthikeyan M, Bhaskaran R, Radhika K, Mathiyazhagan S, Jayakumar V, Sandosskumar R, Velazhahan R (2005) Endophytic Pseudomonas fluorescens Endo2 and Endo35 induce resistance in black gram (Vigna mungo L. Hepper) to the pathogen Macrophomina phaseolina. J Plant Interact 1: 135-143.
26. Kennedy IR, Choudhury ATMA, Kecskés ML (2004) Non-symbiotic bacterial diazotrophs in crop-farming systems: can their potential for plant growth promotion be better exploited? Soil Biol Biochem 36: 1229-1244.
27. Khan Z, Doty SL (2009) Characterization of bacterial endophytes of sweet potato plants. Plant Soil 322: 197-207.
28. Lacava PT, Araújo WL, Marcon J, Maccheroni W Jr, Azevedo JL (2004) Interaction between endophytic bacteria from citrus plants and the phytopathogenic bacteria Xylella fastidiosa, causal agent of citrus-variegated chlorosis. Lett Appl Microbiol 39: 55-59.
29. Lauzon CR, Mccombs SD, Potter SE, Peabody NC (2009) Establishment and vertical passage of Enterobacter (Pantoea) Agglomerans and Klebsiella pneumoniae through all life stages of the Mediterranean fruit fly (Diptera: Tephritidae). Ann Entomol Soc Am 102: 85-95.
30. Li Y, Solomon S (2003) Ethephon: a versatile growth regulator for sugarcane industry. Sugar Tech 5: 213-223.
31. Miché L, Battistoni F, Gemmer S, Belghazi M, Reinhold-Hurek B (2006) Upregulation of jasmonate-inducible defense proteins and differential colonization of roots of Oryza sativa cultivars with the endophyte Azoarcus sp. Mol Plant Microbe Interact 19: 502-511.
32. Morgan JAW, Bending GD, White PJ (2005) Biological costs and benefits to plant-microbe interactions in the rhizosphere. J Exp Bot 56: 1729-1739.
33. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with Tobacco tissue cultures. Physiol Plant 15: 473-497.
34. Oliveira ZM, Floh EIS, Ferrara FIS, Barbosa HR (2011) Diazotrophyc rhizobacteria isolated from sugarcane can release amino acids in a synthetic culture medium. Biol Fertil Soil 47: 957-962.
35. Pal KK, Tilak KVBR, Saxena AK, Dey R, Singh CS (2001) Suppression of maize root diseases caused by Macrophomina phaseolina, Fusarium moniliforme and Fusarium graminearum by plant growth promoting rhizobacteria. Microbiol Res 156: 209-223.
36. Pariona-Llanos R, Ferrara FIS, Soto HH, Barbosa HR (2010) Influence of organic fertilization on the number of culturable diazotrophic endophytic bactéria isolated from sugarcane. Eur J Soil Biol 46: 387-393.
37. Persello-Cartieaux F, Nussaume L, Robaglia C (2003) Tales from the underground: molecular plant-rhizobacteria interactions. Plant Cell Environ 26: 189-199.
38. Pierik R, Tholen D, Poorter H, Visser EJW, Voesenek LACJ (2006) The Janus face of ethylene: growth inhibition and stimulation. Trends Plant Sci 11: 176-183.
39. Ramakrishna BS (2007) The normal bacterial flora of the human intestine and its regulation. J Clin Gastroenterol 41: S2-S6.
40. Raupach GS, Liu L, Murphy JF, Tuzun S, Kloepper JW (1996) Induced systemic resistance in cucumber and tomato against cucumber mosaic cucumovirus using plant growth-promoting rhizobacteria (PGPR). Plant Dis 80: 891-894.
41. Renwick AR, Campbell A, Coe S (1991) Assessment of in vivo screening systems for potential biocontrol agents of Gaeumannomyces graminis. Plant Physiol 40: 524-532.
42. Rodriguez H, Fraga R (1999) Phosphate solubilizing bacteria and their role in plant growth promotion. Biotechnol Adv 17: 319-339.
43. Roesch LFW, Camargo FAO, Bento FM, Triplett EW (2007a) Biodiversity of diazotrophic bacteria within the soil, root and stem of field-grown maize. Plant Soil 302: 91-104.
44. Roesch LFW, Quadros PD, Camargo FAO, Triplett EW (2007b) Screening of diazotrophic bacteria Azopirillum spp. for nitrogen fixation and auxin production in multiple field sites in southern Brazil. World J Microbiol Biotechnol 23: 1377-1383.
45. Rosenblueth M, Martínez-Romero E (2006) Bacterial endophytes and their interactions with hosts. Mol Plant Microbe Interact 19: 827-837.
46. Sharma A, Johri BN, Sharma AK, Glick BR (2003) Plant growth promoting bacterium Pseudomonas sp., strain GFP(3) influences iron acquisition in mung bean (Vigna radiate L. Wilzeck). Soil Biol Biochem 35: 887-894.
47. Sheng X, Chen X, He L (2008) Characteristics of an endophytic pyrene-degrading bacterium of Enterobacter sp. 12 J1 from Allium macrostemon Bunge. Int Biodeterior Biodegrad 62: 88-95.
48. Shoebitz M, Ribaudo CM, Pardo MA, Cantore ML, Ciampi L, Curá JA (2009) Plant growth promoting properties of a strain of Enterobacter ludwigii isolated from Lolium perenne rhizosphere. Soil Biol Biochem 41: 1768-1774.
49. Spaepen S, Vanderleyden J, Remans R (2007) Indole-3-acetic acid in microbial and microorganism-plant signaling. FEMS Microbiol Rev 31: 425-448.
50. Thuler DS, Floh EIS, Handro W, Barbosa HR (2003a) Plant growth regulators and amino acids released by Azospirillum sp. in chemically defined media. Lett Appl Microbiol 37: 174-178.
51. Thuler DS, Floh EIS, Handro W, Barbosa HR (2003b) Beijerinckia derxii releases plant growth regulators and amino acids in synthetic media independent of nitrogenase activity. J Appl Microbiol 95: 799-806.
52. Wang R, Wu S, Li X, He, Liu Y (2009) Detection of AmpC β-lactamase and drug resistance of Enterobacter cloacae. Front Med China 3: 72-75.
53. Weyens N, van der Lelie D, Taghavi S, Newman L, Vangronsveld J (2009) Exploiting plant-microbe partnerships to improve biomass production and remediation. Trends Biotechnol 27: 591-598.
54. White J, Prell J, James EK, Poole P (2007) Nutrient sharing between symbionts. Plant Physiol 144: 604-614.
55. 2 fixation between Azospirillum and wheat. Aust J Plant Physiol 28: 969-974.
56. Wyse RE, Komor E (1984) Mechanism of amino acid uptake by sugarcane suspension cells. Plant Physiol 76: 865-870.
57. Xie H, Pasternak JJ, Glick BR (1996) Isolation and characterization of mutants of the plant growth-promoting rhizobacterium Pseudomonas putida CR12-2 that overproduce indoleacetic acid. Curr Microbiol 32: 67-71.
58. Yim WJ, Poonguzhali S, Madhaiyan M, Palaniappan P, Siddikee MA, Sa T (2009) Characterization of plant-growth promoting diazotrophic bacteria isolated from field grown Chinese cabbage under different fertilization conditions. J Microbiol 47: 147-155.