-
1
-
-
33751020853
-
Quadruplex DNA: Sequence, topology and structure
-
DOI 10.1093/nar/gkl655
-
Burge, S., Parkinson, G.N., Hazel, P., Todd, A.K. and Neidle, S. (2006) Quadruplex DNA: Sequence, topology and structure. Nucleic Acids Res., 34, 5402-5415. (Pubitemid 44742430
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.19
, pp. 5402-5415
-
-
Burge, S.1
Parkinson, G.N.2
Hazel, P.3
Todd, A.K.4
Neidle, S.5
-
2
-
-
84877768759
-
G-quadruplex structures are stable and detectable in human genomic DNA
-
Lam, E.Y., Beraldi, D., Tannahill, D. and Balasubramanian, S. (2013) G-quadruplex structures are stable and detectable in human genomic DNA. Nat. Commun., 4, 1796.
-
(2013)
Nat. Commun.
, vol.4
, pp. 1796
-
-
Lam, E.Y.1
Beraldi, D.2
Tannahill, D.3
Balasubramanian, S.4
-
3
-
-
84862229118
-
50-UTR RNA G-quadruplexes: Translation regulation and targeting
-
Bugaut, A. and Balasubramanian, S. (2012) 50-UTR RNA G-quadruplexes: Translation regulation and targeting. Nucleic Acids Res., 40, 4727-4741.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 4727-4741
-
-
Bugaut, A.1
Balasubramanian, S.2
-
4
-
-
84857863993
-
A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro
-
Raiber, E.A., Kranaster, R., Lam, E., Nikan, M. and Balasubramanian, S. (2012) A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro. Nucleic Acids Res., 40, 1499-1508.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 1499-1508
-
-
Raiber, E.A.1
Kranaster, R.2
Lam, E.3
Nikan, M.4
Balasubramanian, S.5
-
5
-
-
84863116846
-
Yin Yang 1 contains G-quadruplex structures in its promoter and 50-UTR and its expression is modulated by G4 resolvase 1
-
Huang, W., Smaldino, P.J., Zhang, Q., Miller, L.D., Cao, P., Stadelman, K., Wan, M., Giri, B., Lei, M., Nagamine, Y. et al. (2011) Yin Yang 1 contains G-quadruplex structures in its promoter and 50-UTR and its expression is modulated by G4 resolvase 1. Nucleic Acids Res., 40, 1033-1049.
-
(2011)
Nucleic Acids Res.
, vol.40
, pp. 1033-1049
-
-
Huang, W.1
Smaldino, P.J.2
Zhang, Q.3
Miller, L.D.4
Cao, P.5
Stadelman, K.6
Wan, M.7
Giri, B.8
Lei, M.9
Nagamine, Y.10
-
6
-
-
80052010547
-
Histone deacetylase inhibitor MS-275 stimulates bone formation in part by enhancing Dhx36-mediated TNAP transcription
-
Kim, H.N., Lee, J.H., Bae, S.C., Ryoo, H.M., Kim, H.H., Ha, H. and Lee, Z.H. (2011) Histone deacetylase inhibitor MS-275 stimulates bone formation in part by enhancing Dhx36-mediated TNAP transcription. J. Bone Miner Res., 26, 2161-2173.
-
(2011)
J. Bone Miner Res.
, vol.26
, pp. 2161-2173
-
-
Kim, H.N.1
Lee, J.H.2
Bae, S.C.3
Ryoo, H.M.4
Kim, H.H.5
Ha, H.6
Lee, Z.H.7
-
7
-
-
77957061503
-
The BCL-22 untranslated region contains an RNA G-quadruplex-forming motif that modulates protein expression
-
Shahid, R., Bugaut, A. and Balasubramanian, S. (2010) The BCL-22 untranslated region contains an RNA G-quadruplex-forming motif that modulates protein expression. Biochemistry, 49, 8300-8306.
-
(2010)
Biochemistry
, vol.49
, pp. 8300-8306
-
-
Shahid, R.1
Bugaut, A.2
Balasubramanian, S.3
-
8
-
-
84867622361
-
G-quadruplexes in RNA biology
-
Millevoi, S., Moine, H. and Vagner, S. (2012) G-quadruplexes in RNA biology. Wiley Interdiscip. Rev. RNA, 3, 495-507.
-
(2012)
Wiley Interdiscip Rev. RNA
, vol.3
, pp. 495-507
-
-
Millevoi, S.1
Moine, H.2
Vagner, S.3
-
9
-
-
79952299200
-
G-quadruplex structures in TP53 intron 3: Role in alternative splicing and in production of p53 mRNA isoforms
-
Marcel, V., Tran, P.L., Sagne, C., Martel-Planche, G., Vaslin, L., Teulade-Fichou, M.P., Hall, J., Mergny, J.L., Hainaut, P. and Van Dyck, E. (2011) G-quadruplex structures in TP53 intron 3: Role in alternative splicing and in production of p53 mRNA isoforms. Carcinogenesis, 32, 271-278.
-
(2011)
Carcinogenesis
, vol.32
, pp. 271-278
-
-
Marcel, V.1
Tran, P.L.2
Sagne, C.3
Martel-Planche, G.4
Vaslin, L.5
Teulade-Fichou, M.P.6
Hall, J.7
Mergny, J.L.8
Hainaut, P.9
Van Dyck, E.10
-
10
-
-
84860211280
-
Searching drug-like anti-cancer compound(s based on G-quadruplex ligands
-
Li, Q., Xiang, J.F., Zhang, H. and Tang, Y.L. (2012) Searching drug-like anti-cancer compound(s) based on G-quadruplex ligands. Curr. Pharm. Des., 18, 1973-1983.
-
(2012)
Curr. Pharm. Des.
, vol.18
, pp. 1973-1983
-
-
Li, Q.1
Xiang, J.F.2
Zhang, H.3
Tang, Y.L.4
-
11
-
-
84860143903
-
G-quadruplex binding ligands: From naturally occurring to rationally designed molecules
-
Vy Thi Le, T., Han, S., Chae, J. and Park, H.J. (2012) G-quadruplex binding ligands: From naturally occurring to rationally designed molecules. Curr. Pharm. Des., 18, 1948-1972.
-
(2012)
Curr. Pharm. Des.
, pp. 18
-
-
Vy Thi Le, T.1
Han, S.2
Chae, J.3
Park, H.J.4
-
12
-
-
84861367008
-
The RNA helicase RHAU (DHX36 unwinds a G4-quadruplex in human telomerase RNA and promotes the formation of the P1 helix template boundary
-
Booy, E.P., Meier, M., Okun, N., Novakowski, S.K., Xiong, S., Stetefeld, J. and McKenna, S.A. (2012) The RNA helicase RHAU (DHX36) unwinds a G4-quadruplex in human telomerase RNA and promotes the formation of the P1 helix template boundary. Nucleic Acids Res., 40, 4110-4124.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 4110-4124
-
-
Booy, E.P.1
Meier, M.2
Okun, N.3
Novakowski, S.K.4
Xiong, S.5
Stetefeld, J.6
McKenna, S.A.7
-
13
-
-
33644664075
-
The DEXH protein product of the DHX36 gene is the major source of tetramolecular quadruplex G4-DNA resolving activity in HeLa cell lysates
-
Vaughn, J.P., Creacy, S.D., Routh, E.D., Joyner-Butt, C., Jenkins, G.S., Pauli, S., Nagamine, Y. and Akman, S.A. (2005) The DEXH protein product of the DHX36 gene is the major source of tetramolecular quadruplex G4-DNA resolving activity in HeLa cell lysates. J. Biol. Chem., 280, 38117-38120.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 38117-38120
-
-
Vaughn, J.P.1
Creacy, S.D.2
Routh, E.D.3
Joyner-Butt, C.4
Jenkins, G.S.5
Pauli, S.6
Nagamine, Y.7
Akman, S.A.8
-
14
-
-
78049439594
-
Role of the amino terminal RHAU-specific motif in the recognition and resolution of guanine quadruplex-RNA by the DEAH-box RNA helicase RHAU
-
Lattmann, S., Giri, B., Vaughn, J.P., Akman, S.A. and Nagamine, Y. (2010) Role of the amino terminal RHAU-specific motif in the recognition and resolution of guanine quadruplex-RNA by the DEAH-box RNA helicase RHAU. Nucleic Acids Res., 38, 6219-6233.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 6219-6233
-
-
Lattmann, S.1
Giri, B.2
Vaughn, J.P.3
Akman, S.A.4
Nagamine, Y.5
-
15
-
-
84890288582
-
Binding of G-quadruplexes to the N-Terminal recognition domain of the RNA helicase associated with AU-rich element (RHAU
-
Meier, M., Patel, T.R., Booy, E.P., Marushchak, O., Okun, N., Deo, S., Howard, R., McEleney, K., Harding, S.E., Stetefeld, J. et al. (2013) Binding of G-quadruplexes to the N-Terminal recognition domain of the RNA helicase associated with AU-rich element (RHAU) J. Biol. Chem., 288, 35014-35027.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 35014-35027
-
-
Meier, M.1
Patel, T.R.2
Booy, E.P.3
Marushchak, O.4
Okun, N.5
Deo, S.6
Howard, R.7
McEleney, K.8
Harding, S.E.9
Stetefeld, J.10
-
16
-
-
82255181578
-
The DEAH-box RNA helicase RHAU binds an intramolecular RNA G-quadruplex in TERC and associates with telomerase holoenzyme
-
Lattmann, S., Stadler, M.B., Vaughn, J.P., Akman, S.A. and Nagamine, Y. (2011) The DEAH-box RNA helicase RHAU binds an intramolecular RNA G-quadruplex in TERC and associates with telomerase holoenzyme. Nucleic Acids Res., 39, 9390-9404.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 9390-9404
-
-
Lattmann, S.1
Stadler, M.B.2
Vaughn, J.P.3
Akman, S.A.4
Nagamine, Y.5
-
17
-
-
79251591012
-
The 50 guanosine tracts of human telomerase RNA are recognized by the G-quadruplex binding domain of the RNA helicase DHX36 and function to increase RNA accumulation
-
Sexton, A.N. and Collins, K. (2011) The 50 guanosine tracts of human telomerase RNA are recognized by the G-quadruplex binding domain of the RNA helicase DHX36 and function to increase RNA accumulation. Mol. Cell Biol., 31, 736-743.
-
(2011)
Mol. Cell Biol.
, vol.31
, pp. 736-743
-
-
Sexton, A.N.1
Collins, K.2
-
18
-
-
35748932681
-
Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells
-
DOI 10.1038/sj.embor.7401088, PII 7401088
-
Hock, J., Weinmann, L., Ender, C., Rudel, S., Kremmer, E., Raabe, M., Urlaub, H. and Meister, G. (2007) Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells. EMBO Rep., 8, 1052-1060. (Pubitemid 350042341
-
(2007)
EMBO Reports
, vol.8
, Issue.11
, pp. 1052-1060
-
-
Hock, J.1
Weinmann, L.2
Ender, C.3
Rudel, S.4
Kremmer, E.5
Raabe, M.6
Urlaub, H.7
Meister, G.8
-
19
-
-
84877308887
-
The DEAH-box helicase DHX36 mediates dendritic localization of the neuronal precursor-microRNA-134
-
Bicker, S., Khudayberdiev, S., Weiss, K., Zocher, K., Baumeister, S. and Schratt, G. (2013) The DEAH-box helicase DHX36 mediates dendritic localization of the neuronal precursor-microRNA-134. Genes Dev., 27, 991-996.
-
(2013)
Genes Dev.
, vol.27
, pp. 991-996
-
-
Bicker, S.1
Khudayberdiev, S.2
Weiss, K.3
Zocher, K.4
Baumeister, S.5
Schratt, G.6
-
20
-
-
1642523679
-
Facilitation of mRNA Deadenylation and Decay by the Exosome-Bound, DExH Protein RHAU
-
DOI 10.1016/S1097-2765(03)00481-7
-
Tran, H., Schilling, M., Wirbelauer, C., Hess, D. and Nagamine, Y. (2004) Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU. Mol. Cell, 13, 101-111. (Pubitemid 38117119
-
(2004)
Molecular Cell
, vol.13
, Issue.1
, pp. 101-111
-
-
Tran, H.1
Schilling, M.2
Wirbelauer, C.3
Hess, D.4
Nagamine, Y.5
-
21
-
-
84869237206
-
Dicer-dependent and-independent Argonaute2 protein interaction networks in mammalian cells
-
Frohn, A., Eberl, H.C., Stohr, J., Glasmacher, E., Rudel, S., Heissmeyer, V., Mann, M. and Meister, G. (2012) Dicer-dependent and-independent Argonaute2 protein interaction networks in mammalian cells. Mol. Cell Proteomics, 11, 1442-1456.
-
(2012)
Mol. Cell Proteomics
, vol.11
, pp. 1442-1456
-
-
Frohn, A.1
Eberl, H.C.2
Stohr, J.3
Glasmacher, E.4
Rudel, S.5
Heissmeyer, V.6
Mann, M.7
Meister, G.8
-
22
-
-
0029939460
-
Ptx1, a bicoid-related homeo box transcription factor involved in transcription of the pro-opiomelanocortin gene
-
Lamonerie, T., Tremblay, J.J., Lanctot, C., Therrien, M., Gauthier, Y. and Drouin, J. (1996) Ptx1, a bicoid-related homeo box transcription factor involved in transcription of the proopiomelanocortin gene. Genes Dev., 10, 1284-1295. (Pubitemid 26171108
-
(1996)
Genes and Development
, vol.10
, Issue.10
, pp. 1284-1295
-
-
Lamonerie, T.1
Tremblay, J.J.2
Lanctot, C.3
Therrien, M.4
Gauthier, Y.5
Drouin, J.6
-
23
-
-
84954358299
-
Asymmetric lower-limb malformations in individuals with homeobox PITX1 gene mutation
-
Gurnett, C.A., Alaee, F., Kruse, L.M., Desruisseau, D.M., Hecht, J.T., Wise, C.A., Bowcock, A.M. and Dobbs, M.B. (2008) Asymmetric lower-limb malformations in individuals with homeobox PITX1 gene mutation. Am. J. Hum. Genet., 83, 616-622.
-
(2008)
Am. J. Hum. Genet.
, vol.83
, pp. 616-622
-
-
Gurnett, C.A.1
Alaee, F.2
Kruse, L.M.3
Desruisseau, D.M.4
Hecht, J.T.5
Wise, C.A.6
Bowcock, A.M.7
Dobbs, M.B.8
-
24
-
-
84899029209
-
Liebenberg syndrome is caused by a deletion upstream to the PITX1 gene resulting in transformation of the upper limbs to reflect lower limb characteristics
-
Al-Qattan, M.M., Al-Thunayan, A., Alabdulkareem, I. and Al Balwi, M. (2013) Liebenberg syndrome is caused by a deletion upstream to the PITX1 gene resulting in transformation of the upper limbs to reflect lower limb characteristics. Gene, 12, 00414-00419.
-
(2013)
Gene
, vol.12
, pp. 00414-00419
-
-
Al-Qattan, M.M.1
Al-Thunayan, A.2
Alabdulkareem, I.3
Al Balwi, M.4
-
25
-
-
84861189609
-
Deletions in PITX1 cause a spectrum of lower-limb malformations including mirror-image polydactyly
-
Klopocki, E., Kahler, C., Foulds, N., Shah, H., Joseph, B., Vogel, H., Luttgen, S., Bald, R., Besoke, R., Held, K. et al. (2012) Deletions in PITX1 cause a spectrum of lower-limb malformations including mirror-image polydactyly. Eur. J. Hum. Genet., 20, 705-708.
-
(2012)
Eur. J. Hum. Genet.
, vol.20
, pp. 705-708
-
-
Klopocki, E.1
Kahler, C.2
Foulds, N.3
Shah, H.4
Joseph, B.5
Vogel, H.6
Luttgen, S.7
Bald, R.8
Besoke, R.9
Held, K.10
-
26
-
-
33847267349
-
Decreased PITX1 homeobox gene expression in human lung cancer
-
DOI 10.1016/j.lungcan.2006.11.001, PII S0169500206006052
-
Chen, Y., Knosel, T., Ye, F., Pacyna-Gengelbach, M., Deutschmann, N. and Petersen, I. (2007) Decreased PITX1 homeobox gene expression in human lung cancer. Lung Cancer, 55, 287-294. (Pubitemid 46329185
-
(2007)
Lung Cancer
, vol.55
, Issue.3
, pp. 287-294
-
-
Chen, Y.1
Knosel, T.2
Ye, F.3
Pacyna-Gengelbach, M.4
Deutschmann, N.5
Petersen, I.6
-
27
-
-
39849094036
-
Expression of pituitary homeobox 1 gene in human gastric carcinogenesis and its clinicopathological significance
-
Chen, Y.N., Chen, H., Xu, Y., Zhang, X. and Luo, Y. (2008) Expression of pituitary homeobox 1 gene in human gastric carcinogenesis and its clinicopathological significance. World J. Gastroenterol., 14, 292-297.
-
(2008)
World J. Gastroenterol.
, vol.14
, pp. 292-297
-
-
Chen, Y.N.1
Chen, H.2
Xu, Y.3
Zhang, X.4
Luo, Y.5
-
28
-
-
84867989160
-
Loss of desmocollin 1-3 and homeobox genes PITX1 and CDX2 are associated with tumor progression and survival in colorectal carcinoma
-
Knosel, T., Chen, Y., Hotovy, S., Settmacher, U., Altendorf-Hofmann, A. and Petersen, I. (2012) Loss of desmocollin 1-3 and homeobox genes PITX1 and CDX2 are associated with tumor progression and survival in colorectal carcinoma. Int. J. Colorectal. Dis., 27, 1391-1399.
-
(2012)
Int. J. Colorectal. Dis.
, vol.27
, pp. 1391-1399
-
-
Knosel, T.1
Chen, Y.2
Hotovy, S.3
Settmacher, U.4
Altendorf-Hofmann, A.5
Petersen, I.6
-
29
-
-
27744567515
-
Increased CDX2 and decreased PITX1 homeobox gene expression in Barrett's esophagus and Barrett's-Associated adenocarcinoma
-
DOI 10.1016/j.surg.2005.05.007, PII S0039606005002412
-
Lord, R.V., Brabender, J., Wickramasinghe, K., DeMeester, S.R., Holscher, A., Schneider, P.M., Danenberg, P.V. and DeMeester, T.R. (2005) Increased CDX2 and decreased PITX1 homeobox gene expression in Barrett's esophagus and Barrett's-Associated adenocarcinoma. Surgery, 138, 924-931. (Pubitemid 41608488
-
(2005)
Surgery
, vol.138
, Issue.5
, pp. 924-931
-
-
Lord, R.V.N.1
Brabender, J.2
Wickramasinghe, K.3
DeMeester, S.R.4
Holscher, A.5
Schneider, P.M.6
Danenberg, P.V.7
DeMeester, T.R.8
-
30
-
-
20444426889
-
A genetic screen identifies PITX1 as a suppressor of RAS activity and tumorigenicity
-
DOI 10.1016/j.cell.2005.04.017, PII S0092867405003971
-
Kolfschoten, I.G., van Leeuwen, B., Berns, K., Mullenders, J., Beijersbergen, R.L., Bernards, R., Voorhoeve, P.M. and Agami, R. (2005) A genetic screen identifies PITX1 as a suppressor of RAS activity and tumorigenicity. Cell, 121, 849-858. (Pubitemid 40806417
-
(2005)
Cell
, vol.121
, Issue.6
, pp. 849-858
-
-
Kolfschoten, I.G.M.1
Van Leeuwen, B.2
Berns, K.3
Mullenders, J.4
Beijersbergen, R.L.5
Bernards, R.6
Voorhoeve, P.M.7
Agami, R.8
-
31
-
-
77956941986
-
The c-Abl tyrosine kinase stabilizes Pitx1 in the apoptotic response to DNA damage
-
Yamaguchi, T., Miki, Y. and Yoshida, K. (2010) The c-Abl tyrosine kinase stabilizes Pitx1 in the apoptotic response to DNA damage. Apoptosis, 15, 927-935.
-
(2010)
Apoptosis
, vol.15
, pp. 927-935
-
-
Yamaguchi, T.1
Miki, Y.2
Yoshida, K.3
-
32
-
-
35548949865
-
Transcriptional activation of p53 by Pitx1
-
DOI 10.1038/sj.cdd.4402209, PII 4402209
-
Liu, D.X. and Lobie, P.E. (2007) Transcriptional activation of p53 by Pitx1. Cell Death Differ., 14, 1893-1907. (Pubitemid 350011665
-
(2007)
Cell Death and Differentiation
, vol.14
, Issue.11
, pp. 1893-1907
-
-
Liu, D.X.1
Lobie, P.E.2
-
33
-
-
79953153022
-
Identification of PITX1 as a TERT suppressor gene located on human chromosome 5
-
Qi, D.L., Ohhira, T., Fujisaki, C., Inoue, T., Ohta, T., Osaki, M., Ohshiro, E., Seko, T., Aoki, S., Oshimura, M. et al. (2011) Identification of PITX1 as a TERT suppressor gene located on human chromosome 5. Mol. Cell Biol., 31, 1624-1636.
-
(2011)
Mol. Cell Biol.
, vol.31
, pp. 1624-1636
-
-
Qi, D.L.1
Ohhira, T.2
Fujisaki, C.3
Inoue, T.4
Ohta, T.5
Osaki, M.6
Ohshiro, E.7
Seko, T.8
Aoki, S.9
Oshimura, M.10
-
34
-
-
33747860882
-
QGRS Mapper: A web-based server for predicting G-quadruplexes in nucleotide sequences
-
WEB. SERV. ISS. DOI 10.1093/nar/gkl253
-
Kikin, O., D'Antonio, L. and Bagga, P.S. (2006) QGRS Mapper: A web-based server for predicting G-quadruplexes in nucleotide sequences. Nucleic Acids Res., 34, W676-W682. (Pubitemid 44529856
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Kikin, O.1
D'Antonio, L.2
Bagga, P.S.3
-
35
-
-
38549087401
-
GRSDB2 and GRS-UTRdb: Databases of quadruplex forming G-rich sequences in pre-mRNAs and mRNAs
-
DOI 10.1093/nar/gkm982
-
Kikin, O., Zappala, Z., D'Antonio, L. and Bagga, P.S. (2008) GRSDB2 and GRS-UTRdb: Databases of quadruplex forming G-rich sequences in pre-mRNAs and mRNAs. Nucleic Acids Res., 36, D141-D148. (Pubitemid 351149711
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Kikin, O.1
Zappala, Z.2
D'Antonio, L.3
Bagga, P.S.4
-
36
-
-
84934436270
-
Native RNA purification by gel filtration chromatography
-
Booy, E.P., Meng, H. and McKenna, S.A. (2012) Native RNA purification by gel filtration chromatography. Methods Mol. Biol., 941, 69-81.
-
(2012)
Methods Mol. Biol.
, vol.941
, pp. 69-81
-
-
Booy, E.P.1
Meng, H.2
McKenna, S.A.3
-
37
-
-
40049101312
-
Transcription-dependent nucleolar cap localization and possible nuclear function of DExH RNA helicase RHAU
-
Iwamoto, F., Stadler, M., Chalupnikova, K., Oakeley, E. and Nagamine, Y. (2008) Transcription-dependent nucleolar cap localization and possible nuclear function of DExH RNA helicase RHAU. Exp. Cell Res., 314, 1378-1391.
-
(2008)
Exp. Cell Res.
, vol.314
, pp. 1378-1391
-
-
Iwamoto, F.1
Stadler, M.2
Chalupnikova, K.3
Oakeley, E.4
Nagamine, Y.5
-
38
-
-
67650865950
-
Simple and efficient site-directed mutagenesis using two single-primer reactions in parallel to generate mutants for protein structure-function studies
-
Edelheit, O., Hanukoglu, A. and Hanukoglu, I. (2009) Simple and efficient site-directed mutagenesis using two single-primer reactions in parallel to generate mutants for protein structure-function studies. BMC Biotechnol., 9, 61.
-
(2009)
BMC Biotechnol.
, vol.9
, pp. 61
-
-
Edelheit, O.1
Hanukoglu, A.2
Hanukoglu, I.3
-
39
-
-
80052445273
-
G4 resolvase 1 tightly binds and unwinds unimolecular G4-DNA
-
Giri, B., Smaldino, P.J., Thys, R.G., Creacy, S.D., Routh, E.D., Hantgan, R.R., Lattmann, S., Nagamine, Y., Akman, S.A. and Vaughn, J.P. (2011) G4 resolvase 1 tightly binds and unwinds unimolecular G4-DNA. Nucleic Acids Res., 39, 7161-7178.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 7161-7178
-
-
Giri, B.1
Smaldino, P.J.2
Thys, R.G.3
Creacy, S.D.4
Routh, E.D.5
Hantgan, R.R.6
Lattmann, S.7
Nagamine, Y.8
Akman, S.A.9
Vaughn, J.P.10
-
40
-
-
58049200140
-
G4 resolvase 1 binds both DNA and RNA tetramolecular quadruplex with high affinity and is the major source of tetramolecular quadruplex G4-DNA and G4-RNA resolving activity in HeLa cell lysates
-
Creacy, S.D., Routh, E.D., Iwamoto, F., Nagamine, Y., Akman, S.A. and Vaughn, J.P. (2008) G4 resolvase 1 binds both DNA and RNA tetramolecular quadruplex with high affinity and is the major source of tetramolecular quadruplex G4-DNA and G4-RNA resolving activity in HeLa cell lysates. J. Biol. Chem., 283, 34626-34634.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 34626-34634
-
-
Creacy, S.D.1
Routh, E.D.2
Iwamoto, F.3
Nagamine, Y.4
Akman, S.A.5
Vaughn, J.P.6
-
41
-
-
84876057171
-
Global profiling of miRNAs and the hairpin precursors: Insights into miRNA processing and novel miRNA discovery
-
Li, N., You, X., Chen, T., Mackowiak, S.D., Friedlander, M.R., Weigt, M., Du, H., Gogol-Doring, A., Chang, Z., Dieterich, C. et al. (2013) Global profiling of miRNAs and the hairpin precursors: Insights into miRNA processing and novel miRNA discovery. Nucleic Acids Res., 41, 3619-3634.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 3619-3634
-
-
Li, N.1
You, X.2
Chen, T.3
Mackowiak, S.D.4
Friedlander, M.R.5
Weigt, M.6
Du, H.7
Gogol-Doring, A.8
Chang, Z.9
Dieterich, C.10
-
42
-
-
34249810892
-
Argonaute proteins: Mediators of RNA silencing
-
Peters, L. and Meister, G. (2007) Argonaute proteins: Mediators of RNA silencing. Mol. Cell, 26, 611-623.
-
(2007)
Mol. Cell
, vol.26
, pp. 611-623
-
-
Peters, L.1
Meister, G.2
-
43
-
-
77953140972
-
Argonaute proteins at a glance
-
Ender, C. and Meister, G. (2010) Argonaute proteins at a glance. J. Cell Sci., 123, 1819-1823.
-
(2010)
J. Cell Sci.
, vol.123
, pp. 1819-1823
-
-
Ender, C.1
Meister, G.2
-
44
-
-
79953020954
-
Increased siRNA duplex stability correlates with reduced off-Target and elevated on-Target effects
-
Petri, S., Dueck, A., Lehmann, G., Putz, N., Rudel, S., Kremmer, E. and Meister, G. (2011) Increased siRNA duplex stability correlates with reduced off-Target and elevated on-Target effects. RNA, 17, 737-749.
-
(2011)
RNA
, vol.17
, pp. 737-749
-
-
Petri, S.1
Dueck, A.2
Lehmann, G.3
Putz, N.4
Rudel, S.5
Kremmer, E.6
Meister, G.7
-
45
-
-
84875603228
-
Transfection of siRNAs can alter miRNA levels and trigger non-specific protein degradation in mammalian cells
-
Liang, X.H., Hart, C.E. and Crooke, S.T. (2013) Transfection of siRNAs can alter miRNA levels and trigger non-specific protein degradation in mammalian cells. Biochim. Biophys. Acta, 1829, 455-468.
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 455-468
-
-
Liang, X.H.1
Hart, C.E.2
Crooke, S.T.3
-
47
-
-
84867744921
-
DNA secondary structures: Stability and function of G-quadruplex structures
-
Bochman, M.L., Paeschke, K. and Zakian, V.A. (2012) DNA secondary structures: Stability and function of G-quadruplex structures. Nat. Rev. Genet., 13, 770-780.
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 770-780
-
-
Bochman, M.L.1
Paeschke, K.2
Zakian, V.A.3
-
48
-
-
84875464903
-
Quantitative visualization of DNA G-quadruplex structures in human cells
-
Biffi, G., Tannahill, D., McCafferty, J. and Balasubramanian, S. (2013) Quantitative visualization of DNA G-quadruplex structures in human cells. Nat. Chem., 5, 182-186.
-
(2013)
Nat. Chem.
, vol.5
, pp. 182-186
-
-
Biffi, G.1
Tannahill, D.2
McCafferty, J.3
Balasubramanian, S.4
-
49
-
-
20144364292
-
Prevalence of quadruplexes in the human genome
-
DOI 10.1093/nar/gki609
-
Huppert, J.L. and Balasubramanian, S. (2005) Prevalence of quadruplexes in the human genome. Nucleic Acids Res., 33, 2908-2916. (Pubitemid 41511230
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.9
, pp. 2908-2916
-
-
Huppert, J.L.1
Balasubramanian, S.2
-
50
-
-
84898953358
-
Mammalian DNA2 helicase/nuclease cleaves G-quadruplex DNA and is required for telomere integrity
-
Lin, W., Sampathi, S., Dai, H., Liu, C., Zhou, M., Hu, J., Huang, Q., Campbell, J., Shin-Ya, K., Zheng, L. et al. (2013) Mammalian DNA2 helicase/nuclease cleaves G-quadruplex DNA and is required for telomere integrity. EMBO J., 19, 88.
-
(2013)
EMBO J.
, vol.19
, pp. 88
-
-
Lin, W.1
Sampathi, S.2
Dai, H.3
Liu, C.4
Zhou, M.5
Hu, J.6
Huang, Q.7
Campbell, J.8
Shin-Ya, K.9
Zheng, L.10
-
51
-
-
84878122437
-
Pif1 family helicases suppress genome instability at G-quadruplex motifs
-
Paeschke, K., Bochman, M.L., Garcia, P.D., Cejka, P., Friedman, K.L., Kowalczykowski, S.C. and Zakian, V.A. (2013) Pif1 family helicases suppress genome instability at G-quadruplex motifs. Nature, 497, 458-462.
-
(2013)
Nature
, vol.497
, pp. 458-462
-
-
Paeschke, K.1
Bochman, M.L.2
Garcia, P.D.3
Cejka, P.4
Friedman, K.L.5
Kowalczykowski, S.C.6
Zakian, V.A.7
-
52
-
-
69949144600
-
Identification and characterization of nucleolin as a c-myc G-quadruplexbinding protein
-
Gonzalez, V., Guo, K., Hurley, L. and Sun, D. (2009) Identification and characterization of nucleolin as a c-myc G-quadruplexbinding protein. J. Biol. Chem., 284, 23622-23635.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 23622-23635
-
-
Gonzalez, V.1
Guo, K.2
Hurley, L.3
Sun, D.4
-
53
-
-
77954657503
-
The role of G-quadruplex in RNA metabolism: Involvement of FMRP and FMR2P
-
Melko, M. and Bardoni, B. (2010) The role of G-quadruplex in RNA metabolism: Involvement of FMRP and FMR2P. Biochimie, 92, 919-926.
-
(2010)
Biochimie
, vol.92
, pp. 919-926
-
-
Melko, M.1
Bardoni, B.2
-
54
-
-
84860140699
-
G-quadruplex as signal transducer for biorecognition events
-
Lv, L., Guo, Z., Wang, J. and Wang, E. (2012) G-quadruplex as signal transducer for biorecognition events. Curr. Pharm. Des., 18, 2076-2095.
-
(2012)
Curr. Pharm. Des.
, vol.18
, pp. 2076-2095
-
-
Lv, L.1
Guo, Z.2
Wang, J.3
Wang, E.4
-
55
-
-
76349122184
-
Human telomeric G-quadruplex: The current status of telomeric G-quadruplexes as therapeutic targets in human cancer
-
Neidle, S. (2010) Human telomeric G-quadruplex: The current status of telomeric G-quadruplexes as therapeutic targets in human cancer. FEBS J., 277, 1118-1125.
-
(2010)
FEBS J.
, vol.277
, pp. 1118-1125
-
-
Neidle, S.1
-
56
-
-
84861879058
-
Recent progress and future potential for metal complexes as anticancer drugs targeting G-quadruplex DNA
-
Zhang, J., Zhang, F., Li, H., Liu, C., Xia, J., Ma, L., Chu, W., Zhang, Z., Chen, C., Li, S. et al. (2012) Recent progress and future potential for metal complexes as anticancer drugs targeting G-quadruplex DNA. Curr. Med. Chem., 19, 2957-2975.
-
(2012)
Curr. Med. Chem.
, vol.19
, pp. 2957-2975
-
-
Zhang, J.1
Zhang, F.2
Li, H.3
Liu, C.4
Xia, J.5
Ma, L.6
Chu, W.7
Zhang, Z.8
Chen, C.9
Li, S.10
-
57
-
-
58149397138
-
RNA-protein interaction protocols
-
v-vii
-
Lin, R.J. (2008) RNA-protein interaction protocols. Methods Mol. Biol., 488, v-vii.
-
(2008)
Methods Mol. Biol.
, vol.488
-
-
Lin, R.J.1
-
58
-
-
33947262696
-
AU-rich-element-mediated upregulation of translation by fxr1 and argonaute 2
-
DOI 10.1016/j.cell.2007.01.038, PII S0092867407002012
-
Vasudevan, S. and Steitz, J.A. (2007) AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2. Cell, 128, 1105-1118. (Pubitemid 46427873
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1105-1118
-
-
Vasudevan, S.1
Steitz, J.A.2
-
59
-
-
36749026906
-
Switching from repression to activation: MicroRNAs can up-regulate translation
-
Vasudevan, S., Tong, Y. and Steitz, J.A. (2007) Switching from repression to activation: MicroRNAs can up-regulate translation. Science, 318, 1931-1934.
-
(2007)
Science
, vol.318
, pp. 1931-1934
-
-
Vasudevan, S.1
Tong, Y.2
Steitz, J.A.3
|