-
1
-
-
84863611417
-
piRNAs can trigger a multigenerational epigenetic memory in the germline of C. elegans
-
Ashe A., Sapetschnig A, Weick E-M, Mitchell J, Bagijn MP, Cording AC, Doebley A-L, Goldstein LD, Lehrbach NJ, Le Pen J, et al. 2012. piRNAs can trigger a multigenerational epigenetic memory in the germline of C. elegans. Cell 150: 88-99.
-
(2012)
Cell
, vol.150
, pp. 88-99
-
-
Ashe, A.1
Sapetschnig, A.2
Weick, E.-M.3
Mitchell, J.4
Bagijn, M.P.5
Cording, A.C.6
Doebley, A.-L.7
Goldstein, L.D.8
Lehrbach, N.J.9
Le Pen, J.10
-
2
-
-
84864781042
-
Function, targets, and evolution of Caenorhabditis elegans piRNAs
-
Bagijn M. P, Goldstein LD, Sapetschnig A, Weick E-M, Bouasker S, Lehrbach N. J, Simard MJ, Miska EA. 2012. Function, targets, and evolution of Caenorhabditis elegans piRNAs. Science 337: 574-578.
-
(2012)
Science
, vol.337
, pp. 574-578
-
-
Bagijn, M.P.1
Goldstein, L.D.2
Sapetschnig, A.3
Weick, E.-M.4
Bouasker, S.5
Lehrbach, N.J.6
Simard, M.J.7
Miska, E.A.8
-
3
-
-
0023086986
-
Gain-of-function mutations of fem-3, a sex-determination gene in Caenorhabditis elegans
-
Barton M. K, Schedl TB, Kimble J. 1987. Gain-of-function mutations of fem-3, a sex-determination gene in Caenorhabditis elegans. Genetics 115: 107-119.
-
(1987)
Genetics
, vol.115
, pp. 107-119
-
-
Barton, M.K.1
Schedl, T.B.2
Kimble, J.3
-
4
-
-
46149114866
-
PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans
-
Batista P. J, Ruby JG, Claycomb JM, Chiang R, Fahlgren N, Kasschau K. D, Chaves DA, Gu W, Vasale JJ, Duan S, et al. 2008. PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans. Mol Cell 31: 67-78.
-
(2008)
Mol Cell
, vol.31
, pp. 67-78
-
-
Batista, P.J.1
Ruby, J.G.2
Claycomb, J.M.3
Chiang, R.4
Fahlgren, N.5
Kasschau, K.D.6
Chaves, D.A.7
Gu, W.8
Vasale, J.J.9
Duan, S.10
-
5
-
-
0026468354
-
Characterization of a germ-line proliferation mutation in C. elegans
-
Beanan M. J, Strome S. 1992. Characterization of a germ-line proliferation mutation in C. elegans. Development 116: 755-766.
-
(1992)
Development
, vol.116
, pp. 755-766
-
-
Beanan, M.J.1
Strome, S.2
-
6
-
-
84860599349
-
The Caenorhabditis elegans HEN1 ortholog, HENN-1, methylates and stabilizes select subclasses of germline small RNAs
-
Billi A. C, Alessi AF, Khivansara V, Han T, Freeberg M, Mitani S, Kim J.K. 2012. The Caenorhabditis elegans HEN1 ortholog, HENN-1, methylates and stabilizes select subclasses of germline small RNAs. PLoS Genet 8: e1002617.
-
(2012)
PLoS Genet
, vol.8
-
-
Billi, A.C.1
Alessi, A.F.2
Khivansara, V.3
Han, T.4
Freeberg, M.5
Mitani, S.6
Kim, J.K.7
-
7
-
-
84875976599
-
A conserved upstream motif orchestrates autonomous, germline-enriched expression of Caenorhabditis elegans piRNAs
-
Billi A. C, Freeberg MA, Day AM, Chun SY, Khivansara V, Kim JK. 2013. A conserved upstream motif orchestrates autonomous, germline-enriched expression of Caenorhabditis elegans piRNAs. PLoS Genet 9: e1003392.
-
(2013)
PLoS Genet
, vol.9
-
-
Billi, A.C.1
Freeberg, M.A.2
Day, A.M.3
Chun, S.Y.4
Khivansara, V.5
Kim, J.K.6
-
8
-
-
0016063911
-
The genetics of Caenorhabditis elegans
-
Brenner S. 1974. The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
-
(1974)
Genetics
, vol.77
, pp. 71-94
-
-
Brenner, S.1
-
9
-
-
84866516239
-
A nuclear Argonaute promotes multigenerational epigenetic inheritance and germline immortality
-
Buckley B. A, Burkhart KB, Gu SG, Spracklin G, Kershner A, Fritz H, Kimble J., Fire A, Kennedy S. 2012. A nuclear Argonaute promotes multigenerational epigenetic inheritance and germline immortality. Nature 489: 447-451.
-
(2012)
Nature
, vol.489
, pp. 447-451
-
-
Buckley, B.A.1
Burkhart, K.B.2
Gu, S.G.3
Spracklin, G.4
Kershner, A.5
Fritz, H.6
Kimble, J.7
Fire, A.8
Kennedy, S.9
-
10
-
-
84866285309
-
Promoters recognized by forkhead proteins exist for individual 21U-RNAs
-
Cecere G., Zheng GXY, Mansisidor AR, Klymko KE, Grishok A. 2012. Promoters recognized by forkhead proteins exist for individual 21U-RNAs. Mol Cell 47: 734-745.
-
(2012)
Mol Cell
, vol.47
, pp. 734-745
-
-
Cecere, G.1
Zheng, G.X.Y.2
Mansisidor, A.R.3
Klymko, K.E.4
Grishok, A.5
-
11
-
-
80755187804
-
DNA elimination in ciliates: Transposon domestication and genome surveillance
-
Chalker D. L, Yao M-C. 2011. DNA elimination in ciliates: transposon domestication and genome surveillance. Annu Rev Genet 45: 227-246.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 227-246
-
-
Chalker, D.L.1
Yao, M.-C.2
-
12
-
-
84879308632
-
The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures
-
Chen R. AJ, Down TA, Stempor P, Chen QB, Egelhofer TA, Hillier LW, Jeffers TE, Ahringer J. 2013. The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures. Genome Res 23: 1339-1347.
-
(2013)
Genome Res
, vol.23
, pp. 1339-1347
-
-
Chen, R.A.J.1
Down, T.A.2
Stempor, P.3
Chen, Q.B.4
Egelhofer, T.A.5
Hillier, L.W.6
Jeffers, T.E.7
Ahringer, J.8
-
13
-
-
46149092009
-
Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline
-
Das P. P, Bagijn MP, Goldstein LD, Woolford JR, Lehrbach NJ, Sapetschnig A., Buhecha HR, Gilchrist MJ, Howe KL, Stark R, et al. 2008. Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline. Mol Cell 31: 79-90.
-
(2008)
Mol Cell
, vol.31
, pp. 79-90
-
-
Das, P.P.1
Bagijn, M.P.2
Goldstein, L.D.3
Woolford, J.R.4
Lehrbach, N.J.5
Sapetschnig, A.6
Buhecha, H.R.7
Gilchrist, M.J.8
Howe, K.L.9
Stark, R.10
-
14
-
-
84861859600
-
The structural basis for control of eukaryotic protein kinases
-
Endicott J. A, Noble MEM, Johnson LN. 2012. The structural basis for control of eukaryotic protein kinases. Annu Rev Biochem 81: 587-613.
-
(2012)
Annu Rev Biochem
, vol.81
, pp. 587-613
-
-
Endicott, J.A.1
Noble, M.E.M.2
Johnson, L.N.3
-
15
-
-
55049117864
-
Single-copy insertion of transgenes in Caenorhabditis elegans
-
Frøkjaer-Jensen C, Davis MW, Hopkins CE, Newman BJ, Thummel J. M, Olesen S-P, Grunnet M, Jorgensen EM. 2008. Single-copy insertion of transgenes in Caenorhabditis elegans. Nat Genet 40: 1375-1383.
-
(2008)
Nat Genet
, vol.40
, pp. 1375-1383
-
-
Frøkjaer-Jensen, C.1
Davis, M.W.2
Hopkins, C.E.3
Newman, B.J.4
Thummel, J.M.5
Olesen, S.-P.6
Grunnet, M.7
Jorgensen, E.M.8
-
17
-
-
84871593032
-
CapSeq and CIP-TAP identify Pol II start sites and reveal capped small RNAs as C. elegans piRNA precursors
-
Gu W., Lee H-C, Chaves D, Youngman EM, Pazour GJ, Conte D, Mello C.C. 2012. CapSeq and CIP-TAP identify Pol II start sites and reveal capped small RNAs as C. elegans piRNA precursors. Cell 151: 1488-1500.
-
(2012)
Cell
, vol.151
, pp. 1488-1500
-
-
Gu, W.1
Lee, H.-C.2
Chaves, D.3
Youngman, E.M.4
Pazour, G.J.5
Conte, D.6
Mello, C.C.7
-
18
-
-
84858602406
-
InterPro in 2011: New developments in the family and domain prediction database
-
Hunter S., Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S, et al. 2012. InterPro in 2011: new developments in the family and domain prediction database. Nucleic Acids Res 40: D306-D312.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Hunter, S.1
Jones, P.2
Mitchell, A.3
Apweiler, R.4
Attwood, T.K.5
Bateman, A.6
Bernard, T.7
Binns, D.8
Bork, P.9
Burge, S.10
-
19
-
-
84868613084
-
The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis
-
Ipsaro J. J, Haase AD, Knott SR, Joshua-Tor L, Hannon GJ. 2012. The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis. Nature 491: 279-283.
-
(2012)
Nature
, vol.491
, pp. 279-283
-
-
Ipsaro, J.J.1
Haase, A.D.2
Knott, S.R.3
Joshua-Tor, L.4
Hannon, G.J.5
-
20
-
-
84860588377
-
Differential impact of the HEN1 homolog HENN-1 on 21U and 26G RNAs in the germline of Caenorhabditis elegans
-
Kamminga L. M, van Wolfswinkel JC, Luteijn MJ, Kaaij LJT, Bagijn M. P, Sapetschnig A, Miska EA, Berezikov E, Ketting RF. 2012. Differential impact of the HEN1 homolog HENN-1 on 21U and 26G RNAs in the germline of Caenorhabditis elegans. PLoS Genet 8: e1002702.
-
(2012)
PLoS Genet
, vol.8
-
-
Kamminga, L.M.1
van Wolfswinkel, J.C.2
Luteijn, M.J.3
Kaaij, L.J.T.4
Bagijn, M.P.5
Sapetschnig, A.6
Miska, E.A.7
Berezikov, E.8
Ketting, R.F.9
-
21
-
-
63849246525
-
Protein structure prediction on the Web: A case study using the Phyre server
-
Kelley L. A, Sternberg MJE. 2009. Protein structure prediction on the Web: a case study using the Phyre server. Nat Protoc 4: 363-371.
-
(2009)
Nat Protoc
, vol.4
, pp. 363-371
-
-
Kelley, L.A.1
Sternberg, M.J.E.2
-
22
-
-
0032739015
-
Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD
-
Ketting R. F, Haverkamp TH, van Luenen HG, Plasterk RH. 1999. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD. Cell 99: 133-141.
-
(1999)
Cell
, vol.99
, pp. 133-141
-
-
Ketting, R.F.1
Haverkamp, T.H.2
van Luenen, H.G.3
Plasterk, R.H.4
-
23
-
-
0021485284
-
Specification of male development in Caenorhabditis elegans: The fem genes
-
Kimble J., Edgar L, Hirsh D. 1984. Specification of male development in Caenorhabditis elegans: the fem genes. Dev Biol 10: 234-239.
-
(1984)
Dev Biol
, vol.10
, pp. 234-239
-
-
Kimble, J.1
Edgar, L.2
Hirsh, D.3
-
24
-
-
84861459438
-
Systematic analysis of tissue-restricted miRISCs reveals a broad role for micro-RNAs in suppressing basal activity of the C. elegans pathogen response
-
Kudlow B. A, Zhang L, Han M. 2012. Systematic analysis of tissue-restricted miRISCs reveals a broad role for micro-RNAs in suppressing basal activity of the C. elegans pathogen response. Mol Cell 46: 530-541.
-
(2012)
Mol Cell
, vol.46
, pp. 530-541
-
-
Kudlow, B.A.1
Zhang, L.2
Han, M.3
-
25
-
-
84863624978
-
C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts
-
Lee H-C, Gu W, Shirayama M, Youngman E, Conte D, Mello CC. 2012. C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts. Cell 150: 78-87.
-
(2012)
Cell
, vol.150
, pp. 78-87
-
-
Lee, H.-C.1
Gu, W.2
Shirayama, M.3
Youngman, E.4
Conte, D.5
Mello, C.C.6
-
26
-
-
84876070120
-
An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
-
Li X. Z, Roy CK, Dong X, Bolcun-Filas E, Wang J, Han BW, Xu J, Moore M. J, Schimenti JC, Weng Z, et al. 2013. An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes. Mol Cell 50: 67-81.
-
(2013)
Mol Cell
, vol.50
, pp. 67-81
-
-
Li, X.Z.1
Roy, C.K.2
Dong, X.3
Bolcun-Filas, E.4
Wang, J.5
Han, B.W.6
Xu, J.7
Moore, M.J.8
Schimenti, J.C.9
Weng, Z.10
-
27
-
-
0029963896
-
Three-dimensional structure of mammalian casein kinase I: Molecular basis for phosphate recognition
-
Longenecker K. L, Roach PJ, Hurley TD. 1996. Three-dimensional structure of mammalian casein kinase I: molecular basis for phosphate recognition. J Mol Biol 25: 618-631.
-
(1996)
J Mol Biol
, vol.25
, pp. 618-631
-
-
Longenecker, K.L.1
Roach, P.J.2
Hurley, T.D.3
-
28
-
-
84865238298
-
Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans
-
Luteijn M. J, van Bergeijk P, Kaaij LJT, Almeida MV, Roovers EF, Berezikov E., Ketting RF. 2012. Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans. EMBO J 31: 3422-3430.
-
(2012)
EMBO J
, vol.31
, pp. 3422-3430
-
-
Luteijn, M.J.1
van Bergeijk, P.2
Kaaij, L.J.T.3
Almeida, M.V.4
Roovers, E.F.5
Berezikov, E.6
Ketting, R.F.7
-
29
-
-
0037106122
-
Synapsis-dependent and-independent mechanisms stabilize homolog pairing duringmeiotic prophase in C. elegans
-
MacQueen AJ, Colaiacovo MP, McDonald K, Villeneuve AM. 2002. Synapsis-dependent and-independent mechanisms stabilize homolog pairing duringmeiotic prophase in C. elegans. Genes Dev 16: 2428-2442.
-
(2002)
Genes Dev
, vol.16
, pp. 2428-2442
-
-
McQueen, A.J.1
Colaiacovo, M.P.2
McDonald, K.3
Villeneuve, A.M.4
-
30
-
-
0018525889
-
Polyploids and sex determination in Caenorhabditis elegans
-
Madl J. E, Herman RK. 1979. Polyploids and sex determination in Caenorhabditis elegans. Genetics 93: 393-402.
-
(1979)
Genetics
, vol.93
, pp. 393-402
-
-
Madl, J.E.1
Herman, R.K.2
-
31
-
-
60149098474
-
Small RNAs as guardians of the genome
-
Malone C. D, Hannon GJ. 2009. Small RNAs as guardians of the genome. Cell 136: 656-668.
-
(2009)
Cell
, vol.136
, pp. 656-668
-
-
Malone, C.D.1
Hannon, G.J.2
-
32
-
-
76949092432
-
Copy number variation in the genomes of twelve natural isolates of Caenorhabditis elegans
-
Maydan J. S, Lorch A, Edgley ML, Flibotte S, Moerman DG. 2010. Copy number variation in the genomes of twelve natural isolates of Caenorhabditis elegans. BMC Genomics 11: 62.
-
(2010)
BMC Genomics
, vol.11
, pp. 62
-
-
Maydan, J.S.1
Lorch, A.2
Edgley, M.L.3
Flibotte, S.4
Moerman, D.G.5
-
34
-
-
84860562145
-
PIWI associated siRNAs and piRNAs specifically require the Caenorhabditis elegans HEN1 ortholog henn-1
-
Montgomery T. A, Rim Y-S, Zhang C, Dowen RH, Phillips CM, Fischer S. EJ, Ruvkun G. 2012. PIWI associated siRNAs and piRNAs specifically require the Caenorhabditis elegans HEN1 ortholog henn-1. PLoS Genet 8: e1002616.
-
(2012)
PLoS Genet
, vol.8
-
-
Montgomery, T.A.1
Rim, Y.-S.2
Zhang, C.3
Dowen, R.H.4
Phillips, C.M.5
Fischer, S.E.J.6
Ruvkun, G.7
-
35
-
-
0018169637
-
Intersex, a temperaturesensitive mutant of the nematode Caenorhabditis elegans
-
Nelson G. A, Lew KK, Ward S. 1978. Intersex, a temperaturesensitive mutant of the nematode Caenorhabditis elegans. Dev Biol 66: 386-409.
-
(1978)
Dev Biol
, vol.66
, pp. 386-409
-
-
Nelson, G.A.1
Lew, K.K.2
Ward, S.3
-
36
-
-
84868626090
-
Structure and function of Zucchini endoribonuclease in piRNA biogenesis
-
Nishimasu H., Ishizu H, Saito K, Fukuhara S, Kamatani MK, Bonnefond L, Matsumoto N, Nishizawa T, Nakanaga K, Aoki J, et al. 2012. Structure and function of Zucchini endoribonuclease in piRNA biogenesis. Nature 491: 284-287.
-
(2012)
Nature
, vol.491
, pp. 284-287
-
-
Nishimasu, H.1
Ishizu, H.2
Saito, K.3
Fukuhara, S.4
Kamatani, M.K.5
Bonnefond, L.6
Matsumoto, N.7
Nishizawa, T.8
Nakanaga, K.9
Aoki, J.10
-
37
-
-
77957793321
-
An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila
-
Olivieri D., Sykora MM, Sachidanandam R, Mechtler K, Brennecke J. 2010. An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila. EMBO J 29: 3301-3317.
-
(2010)
EMBO J
, vol.29
, pp. 3301-3317
-
-
Olivieri, D.1
Sykora, M.M.2
Sachidanandam, R.3
Mechtler, K.4
Brennecke, J.5
-
38
-
-
84866864333
-
The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila
-
Olivieri D., Senti K-A, Subramanian S, Sachidanandam R, Brennecke J. 2012. The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila. Mol Cell 47: 954-969.
-
(2012)
Mol Cell
, vol.47
, pp. 954-969
-
-
Olivieri, D.1
Senti, K.-A.2
Subramanian, S.3
Sachidanandam, R.4
Brennecke, J.5
-
39
-
-
77951160864
-
A native chromatin purification system for epigenomic profiling in Caenorhabditis elegans
-
Ooi S. L, Henikoff JG, Henikoff S. 2010. A native chromatin purification system for epigenomic profiling in Caenorhabditis elegans. Nucleic Acids Res 38: e26.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Ooi, S.L.1
Henikoff, J.G.2
Henikoff, S.3
-
40
-
-
44149127238
-
The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians
-
Palakodeti D., Smielewska M, Lu Y-C, Yeo GW, Graveley BR. 2008. The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians. RNA 14: 1174-1186.
-
(2008)
RNA
, vol.14
, pp. 1174-1186
-
-
Palakodeti, D.1
Smielewska, M.2
Lu, Y.-C.3
Yeo, G.W.4
Graveley, B.R.5
-
41
-
-
84863710544
-
MUT-16 promotes formation of perinuclear mutator foci required for RNA silencing in the C. elegans germline
-
Phillips C. M, Montgomery TA, Breen PC, Ruvkun G. 2012. MUT-16 promotes formation of perinuclear mutator foci required for RNA silencing in the C. elegans germline. Genes Dev 26: 1433-1444.
-
(2012)
Genes Dev
, vol.26
, pp. 1433-1444
-
-
Phillips, C.M.1
Montgomery, T.A.2
Breen, P.C.3
Ruvkun, G.4
-
42
-
-
84864042164
-
Shutdown is a component of the Drosophila piRNA biogenesis machinery
-
Preall J. B, Czech B, Guzzardo PM, Muerdter F, Hannon GJ. 2012. shutdown is a component of the Drosophila piRNA biogenesis machinery. RNA 18: 1446-1457.
-
(2012)
RNA
, vol.18
, pp. 1446-1457
-
-
Preall, J.B.1
Czech, B.2
Guzzardo, P.M.3
Muerdter, F.4
Hannon, G.J.5
-
43
-
-
28144464878
-
SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells
-
Reddien P. W, Oviedo NJ, Jennings JR, Jenkin JC, Sánchez Alvarado A. 2005. SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells. Science 310: 1327-1330.
-
(2005)
Science
, vol.310
, pp. 1327-1330
-
-
Reddien, P.W.1
Oviedo, N.J.2
Jennings, J.R.3
Jenkin, J.C.4
Sánchez Alvarado, A.5
-
44
-
-
33845436047
-
Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
-
Ruby J., Jan C, Player C, Axtell M, Lee W, Nusbaum C, Ge H, Bartel D. 2006. Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans. Cell 127: 1193-1207.
-
(2006)
Cell
, vol.127
, pp. 1193-1207
-
-
Ruby, J.1
Jan, C.2
Player, C.3
Axtell, M.4
Lee, W.5
Nusbaum, C.6
Ge, H.7
Bartel, D.8
-
45
-
-
84881169064
-
Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans
-
Sarkies P., Ashe A, Le Pen J, McKie MA, Miska EA. 2013. Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans. Genome Res 23: 1258-1270.
-
(2013)
Genome Res
, vol.23
, pp. 1258-1270
-
-
Sarkies, P.1
Ashe, A.2
Le Pen, J.3
McKie, M.A.4
Miska, E.A.5
-
46
-
-
0035967880
-
FUGUE: Sequencestructure homology recognition using environment-specific substitution tables and structure-dependent gap penalties
-
Shi J., Blundell TL, Mizuguchi K. 2001. FUGUE: sequencestructure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. J Mol Biol 310: 243-257.
-
(2001)
J Mol Biol
, vol.310
, pp. 243-257
-
-
Shi, J.1
Blundell, T.L.2
Mizuguchi, K.3
-
47
-
-
84863631177
-
piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline
-
Shirayama M., Seth M, Lee H-C, Gu W, Ishidate T, Conte D, Mello C.C. 2012. piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline. Cell 150: 65-77.
-
(2012)
Cell
, vol.150
, pp. 65-77
-
-
Shirayama, M.1
Seth, M.2
Lee, H.-C.3
Gu, W.4
Ishidate, T.5
Conte, D.6
Mello, C.C.7
-
48
-
-
0035900651
-
On the role of RNA amplification in dsRNA-triggered gene silencing
-
Sijen T., Fleenor J, Simmer F, Thijssen KL, Parrish S, Timmons L, Plasterk R. H, Fire A. 2001. On the role of RNA amplification in dsRNA-triggered gene silencing. Cell 107: 465-476.
-
(2001)
Cell
, vol.107
, pp. 465-476
-
-
Sijen, T.1
Fleenor, J.2
Simmer, F.3
Thijssen, K.L.4
Parrish, S.5
Timmons, L.6
Plasterk, R.H.7
Fire, A.8
-
49
-
-
84867006700
-
System wide analysis of the evolution of innate immunity in the nematode model species Caenorhabditis elegans and Pristionchus pacificus
-
Sinha A., Rae R, Iatsenko I, Sommer RJ. 2012. System wide analysis of the evolution of innate immunity in the nematode model species Caenorhabditis elegans and Pristionchus pacificus. PLoS ONE 7: e44255.
-
(2012)
PLoS ONE
, vol.7
-
-
Sinha, A.1
Rae, R.2
Iatsenko, I.3
Sommer, R.J.4
-
50
-
-
0032717319
-
The rde-1 gene, RNA interference, and transposon silencing in C. elegans
-
Tabara H., Sarkissian M, KellyWG, Fleenor J, Grishok A, Timmons L, Fire A., Mello CC. 1999. The rde-1 gene, RNA interference, and transposon silencing in C. elegans. Cell 99: 123-132.
-
(1999)
Cell
, vol.99
, pp. 123-132
-
-
Tabara, H.1
Sarkissian, M.2
Kelly, W.G.3
Fleenor, J.4
Grishok, A.5
Timmons, L.6
Fire, A.7
Mello, C.C.8
-
51
-
-
45449118682
-
AC elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis
-
Wang G., Reinke V. 2008. A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis. Curr Biol 18: 861-867.
-
(2008)
Curr Biol
, vol.18
, pp. 861-867
-
-
Wang, G.1
Reinke, V.2
-
52
-
-
79957554781
-
MosSCI and gateway compatible plasmid toolkit for constitutive and inducible expression of transgenes in the C. elegans germline
-
Zeiser E., Frøkjaer-Jensen C, Jorgensen E, Ahringer J. 2011. MosSCI and gateway compatible plasmid toolkit for constitutive and inducible expression of transgenes in the C. elegans germline. PLoS ONE 6: e20082.
-
(2011)
PLoS ONE
, vol.6
-
-
Zeiser, E.1
Frøkjaer-Jensen, C.2
Jorgensen, E.3
Ahringer, J.4
|