Immobilization of l-arabinitol dehydrogenase on aldehyde-functionalized silicon oxide nanoparticles for l-xylulose production

Applied Microbiology and Biotechnology

Volumn 98, Issue 3, 2014, Pages 1095-1104

  Singh, Raushan Kumar ^a   Tiwari, Manish Kumar ^a   Singh, Ranjitha ^a   Haw, Jung Rim ^a   Lee, Jung Kul ^a  

^a Konkuk University   (South Korea)

Author keywords

Immobilization; l Arabinitol 4 dehydrogenase; l Xylulose; MWCNTs; Silicon oxide nanoparticles

Indexed keywords

BIOCHEMISTRY; ENZYMES; NANOPARTICLES; RADIOACTIVE WASTE VITRIFICATION; REUSABILITY; SILICON OXIDES; STABILITY;

COMPARATIVE CHARACTERIZATIONS; IMMOBILIZATION EFFICIENCY; IMMOBILIZED ENZYME; INDUSTRIAL PRODUCTION; L-ARABINITOL 4-DEHYDROGENASE; MWCNTS; SILICON OXIDE NANOPARTICLES; XYLULOSE;

SILICON COMPOUNDS;

ALDEHYDE; ARABINITOL; IMMOBILIZED ENZYME; LEVO ARABINITOL 4 DEHYDROGENASE; LEVO XYLULOSE; MULTI WALLED NANOTUBE; NANOPARTICLE; OXIDOREDUCTASE; SILICON OXIDE NANOPARTICLE; UNCLASSIFIED DRUG; XYLULOSE; ALDEHYDE REDUCTASE; L-ARABINITOL 4-DEHYDROGENASE; SILICON DIOXIDE;

ALCOHOL; ALDEHYDE; BIOAVAILABILITY; BREWING INDUSTRY; CATALYSIS; ENZYME ACTIVITY; FUNGUS; IMMOBILIZATION; INDUSTRIAL PRODUCTION; OXIDE; PARTICULATE MATTER; TEMPERATURE EFFECT;

ARTICLE; ENZYME ACTIVITY; ENZYME IMMOBILIZATION; ENZYME KINETICS; ENZYME SYNTHESIS; HYPOCREA JECORINA; NONHUMAN; NUCLEOTIDE SEQUENCE; THERMOSTABILITY; CHEMISTRY; ENZYME STABILITY; ENZYMOLOGY; KINETICS; METABOLISM; TEMPERATURE; TRICHODERMA;

HYPOCREA JECORINA;

ENZYME STABILITY; ENZYMES, IMMOBILIZED; KINETICS; NANOPARTICLES; SILICON DIOXIDE; SUGAR ALCOHOL DEHYDROGENASES; TEMPERATURE; TRICHODERMA; XYLULOSE;

EID: 84898866704     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-013-5209-y     Document Type: Article

References (38)

1. Ansari SA, Husain Q (2012) Potential applications of enzymes immobilized on/in nano materials: a review. Biotechnol Adv 30:512-523
2. Bae B, Sullivan RP, Zhao H, Nair SK (2010) Structure and engineering of l-arabinitol 4-dehydrogenase from Neurospora crassa. J Mol Biol 402:230-240
3. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
4. Dische Z, Borenfreund E (1951) A new spectrophotometric method for the detection and determination of keto sugars and trioses. J Biol Chem 192:583-587
5. Doten RC, Mortlock RP (1985) Production of d- and l-xylulose by mutants of Klebsiella pneumoniae and Erwinia uredovora. Appl Environ Microbiol 49:158-162
6. Fernández-Fernández M, Sanromán MÁ, Moldes D (2012) Recent developments and applications of immobilized laccase. Biotechnol Adv. doi: 10.1016/j.biotechadv.2012.02.013
7. Fishman P, Bar-Yehuda S, Madi L, Cohn I (2002) A3 adenosine receptor as a target for cancer therapy. Anticancer Drugs 13:437-443
8. Goodwin NC, Mabon R, Harrison BA, Shadoan MK, Almstead ZY, Xie Y, Healy J, Buhring LM, DaCosta CM, Bardenhagen J, Mseeh F, Liu Q, Nouraldeen A, Wilson AG, Kimball SD, Powell DR, Rawlins DB (2009) Novel l-xylose derivatives as selective sodium-dependent glucose cotransporter 2 (SGLT2) inhibitors for the treatment of type 2 diabetes. J Med Chem 52:6201-6204
9. Hanefeld U, Gardossi L, Magner E (2009) Understanding enzyme immobilisation. Chem Soc Rev 38:453-468
10. Idris A, Bukhari A (2012) Immobilized Candida antarctica lipase B: hydration, stripping off and application in ring opening polyester synthesis. Biotechnol Adv 30:550-563
11. Kasiganesan H, Wright GL, Chiacchio MA, Gumina G (2009) Novel l-adenosine analogs as cardioprotective agents. Bioorg Med Chem 17:5347-5352
12. Kim J, Grate JW, Wang P (2006) Nanostructures for enzyme stabilization. Chem Eng Sci 61:1017-1026
13. Kim J, Grate JW, Wang P (2008) Nanobiocatalysis and its potential applications. Trends Biotechnol 26:639-646
14. Kishore D, Talat M, Srivastava ON, Kayastha AM (2012) Immobilization of β-galactosidase onto functionalized graphene nano-sheets using response surface methodology and its analytical applications. PLoS ONE 7:e40708
15. Lee SM, Jin LH, Kim JH, Han SO, Na HB, Hyeon T, Koo YM, Kim J, Lee JH (2010) β-glucosidase coating on polymer nanofibers for improved cellulosic ethanol production. Bioprocess Biosyst Eng 33:141-147
16. Leite RSR, Gomes E, Da Silva R (2007) Characterization and comparison of thermostability of purified β-glucosidases from a mesophilic Aureobasidium pullulans and a thermophilic Thermoascus aurantiacus. Proc Biochem 42:1101-1106
17. (2) surfaces. Langmuir 24:1965-1972
18. Mateo C, Abian O, Fernandez-Lafuente R, Guisan JM (2000) Increase in conformational stability of enzymes immobilized on epoxy-activated supports by favoring additional multipoint covalent attachment. Enzyme Microb Technol 26:509-515
19. Mathe C, Gosselin G (2006) l-nucleoside enantiomers as antivirals drugs: a mini-review. Antiviral Res 71:276-281
20. Pang HL, Liu J, Hu D, Zhang XH, Chen JH (2010) Immobilization of laccase onto 1-aminopyrene functionalized carbon nanotubes and their electrocatalytic activity for oxygen reduction. Electrochim Acta 55:6611-6616
21. Pavlidis IV, Vorhaben T, Tsoufis T, Rudolf P, Bornscheuer UT, Gournis D, Stamatis H (2011) Development of effective nanobiocatalytic systems through the immobilization of hydrolases on functionalized carbon-based nanomaterials. Bioresour Technol 115:164-171
22. Polizzi KM, Bommarius AS, Broering JM, Chaparro-Riggers JF (2007) Stability of biocatalysts. Curr Opin Chem Biol 11:220-225
23. Richard P, Londesborough J, Putkonen M, Kalkkinen N, Penttila M (2001) Cloning and expression of a fungal L-arabinitol 4-dehydrogenase gene. J Biol Chem 276:40631-40637
24. Ryan BJ, O'Fagain C (2007) Arginine-to-lysine substitutions influence recombinant horseradish peroxidase stability and immobilisation effectiveness. BMC Biotechnol 7:86
25. Sali A, Potterton L, Yuan F, van Vlijmen H, Karplus M (1995) Evaluation of comparative protein modeling by MODELLER. Proteins 23:318-326
26. Singh RK, Zhang YW, Nguyen NP, Jeya M, Lee JK (2011) Covalent immobilization of β-1,4-glucosidase from Agaricus arvensis onto functionalized silicon oxide nanoparticles. Appl Microbiol Biotechnol 89:337-344
27. Singh RK, Tiwari MK, Kim D, Kang YC, Ramachandran P, Lee JK (2013a) Molecular cloning and characterization of a GH11 endoxylanase from Chaetomium globosum, and its use in enzymatic pretreatment of biomass. Appl Microbiol Biotechnol 97:7205-7214
28. Singh RK, Tiwari MK, Singh R, Lee JK (2013b) From protein engineering to immobilization: promising strategies for the upgrade of industrial enzymes. Int J Mol Sci 14:1232-1277
29. Tan YH, Liu M, Nolting B, Go JG, Gervay-Hague J, Liu GY (2008) A nanoengineering approach for investigation and regulation of protein immobilization. ACS Nano 2:2374-2384
30. Tiwari MK, Lee JK (2010) Molecular modeling studies of l-arabinitol 4-dehydrogenase of Hypocrea jecorina: its binding interactions with substrate and cofactor. J Mol Graph Model 28:707-713
31. Tiwari MK, Moon HJ, Jeya M, Lee JK (2010) Cloning and characterization of a thermostable xylitol dehydrogenase from Rhizobium etli CFN42. Appl Microbiol Biotechnol 87:571-581
32. Tiwari MK, Singh RK, Singh R, Jeya M, Zhao H, Lee JK (2012) Role of conserved glycine in zinc-dependent medium chain dehydrogenase/reductase superfamily. J Biol Chem 287:19429-19439
33. Usvalampi A, Turunen O, Valjakka J, Pastinen O, Leisola M, Nyyssola A (2012) Production of l-xylose from l-xylulose using Escherichia coli l-fucose isomerase. Enzyme Microb Technol 50:71-76
34. Verma ML, Chaudhary R, Tsuzuki T, Barrow CJ, Puri M (2013) Immobilization of β-glucosidase on a magnetic nanoparticle improves thermostability: application in cellobiose hydrolysis. Bioresour Technol 135:2-6
35. Wang P, Hu X, Cook S, Hwang H-M (2009) Influence of silica-derived nano-supporters on cellobiase after immobilization. Appl Biochem Biotechnol 158:88-96
36. Wang X, Zhou D, Sinniah K, Clarke C, Birch L, Li H, Rayment T, Abell C (2006) Electrostatic orientation of enzymes on surfaces for ligand screening probed by force spectroscopy. Langmuir 22:887-892
37. Wong LS, Khan F, Micklefield J (2009) Selective covalent protein immobilization: strategies and applications. Chem Rev 109:4025-4053
38. Zhang YW, Tiwari MK, Jeya M, Lee JK (2011) Covalent immobilization of recombinant Rhizobium etli CFN42 xylitol dehydrogenase onto modified silica nanoparticles. Appl Microbiol Biotechnol 90:499-507