Molecular modeling studies of l-arabinitol 4-dehydrogenase of Hypocrea jecorina: Its binding interactions with substrate and cofactor

Journal of Molecular Graphics and Modelling

Volumn 28, Issue 8, 2010, Pages 707-713

  Tiwari, Manish ^a   Lee, Jung Kul ^a,b  

^a Konkuk University   (South Korea)

^b Konkuk University   (South Korea)

Author keywords

Catalytic Zn2+; Cofactor binding domain; Hypocrea jecorina; l Arabinitol 4 dehydrogenase; Molecular modeling

Indexed keywords

3D STRUCTURE; BINDING DOMAIN; BINDING INTERACTION; BINDING POCKETS; CATABOLIC PATHWAY; COENZYME BINDING; COFACTOR BINDING; COFACTOR BINDING DOMAIN; COFACTORS; HYDROGEN BONDINGS; HYPOCREA; L-ARABINOSE; MOLECULAR MODELING STUDIES; POLYOLS; PRIMARY OBJECTIVE; SORBITOL DEHYDROGENASE; XYLULOSE;

ALCOHOLS; BINDING ENERGY; BIOCHEMICAL ENGINEERING; ENZYMES; HYDROGEN BONDS; MOLECULAR MODELING; SUBSTRATES; SUGAR (SUCROSE); ZINC;

CRYSTAL STRUCTURE;

ARABINITOL; ARABINOSE; ARGININE; CYSTEINE; FUNGAL ENZYME; GLYCINE; IDITOL DEHYDROGENASE; ISOLEUCINE; LEVO ARABINITOL 4 DEHYDROGENASE; LIGAND; NICOTINAMIDE ADENINE DINUCLEOTIDE; POLYOL; SUGAR; UNCLASSIFIED DRUG; VALINE; XYLULOSE; ZINC;

ARTICLE; BINDING AFFINITY; BINDING SITE; CATABOLISM; CATALYSIS; CRYSTAL STRUCTURE; ENZYME BINDING; ENZYME ENGINEERING; ENZYME STRUCTURE; ENZYME SUBSTRATE COMPLEX; HYDROGEN BOND; HYPOCREA JECORINA; LIGAND BINDING; MOLECULAR DOCKING; MOLECULAR DYNAMICS; MOLECULAR MECHANICS; MOLECULAR MODEL; MUTAGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN;

AMINO ACID SEQUENCE; BINDING SITES; FUNGAL PROTEINS; HUMANS; HYPOCREA; MODELS, MOLECULAR; MOLECULAR DYNAMICS SIMULATION; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; PROTEIN BINDING; PROTEIN CONFORMATION; SEQUENCE ALIGNMENT; SUGAR ALCOHOL DEHYDROGENASES;

FUNGI; HYPOCREA JECORINA;

EID: 77951978627     PISSN: 10933263     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmgm.2010.01.004     Document Type: Article

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