A vertebrate model for the study of lipid binding/transfer protein function: Conservation of OSBP-related proteins between zebrafish and human

Biochemical and Biophysical Research Communications

Volumn 446, Issue 3, 2014, Pages 675-680

  Zhou, You ^a   Wohlfahrt, Gerd ^b   Paavola, Jere ^a   Olkkonen, Vesa M ^a,c  

^a MINERVA FOUNDATION INSTITUTE FOR MEDICAL RESEARCH   (Finland)

^b ORION CORPORATION   (Finland)

^c UNIVERSITY OF HELSINKI   (Finland)

Author keywords

Gene conservation; Lipid binding protein; ORP; Osbpl; Phosphatidylinositol 4 phosphate; Zebrafish

Indexed keywords

GLYCEROPHOSPHOLIPID; LIPID BINDING PROTEIN; LIPID TRANSFER PROTEIN; OXYSTEROL BINDING PROTEIN; OXYSTEROL BINDING PROTEIN LIKE PROTEIN; OXYSTEROL BINDING PROTEIN LIKE PROTEIN 2; OXYSTEROL BINDING PROTEIN LIKE PROTEIN 3; OXYSTEROL BINDING PROTEIN RELATED PROTEIN; PHOSPHATIDYLINOSITOL 4 PHOSPHATE; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; BIOINFORMATICS; CHROMOSOME; ENDOSOME; GENE DUPLICATION; GENE LOCATION; GENETIC CONSERVATION; GENETIC SIMILARITY; HUMAN; HUMAN CELL; LIGAND BINDING; MOLECULAR MODEL; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOLOGY; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN STRUCTURE; SEQUENCE HOMOLOGY; TELEOST; TRANS GOLGI NETWORK; VERTEBRATE; ZEBRA FISH;

DANIO RERIO; EUKARYOTA; TELEOSTEI; VERTEBRATA;

GENE CONSERVATION; LIPID-BINDING PROTEIN; ORP; OSBPL; PHOSPHATIDYLINOSITOL-4-PHOSPHATE; ZEBRAFISH;

AMINO ACID SEQUENCE; ANIMALS; CARRIER PROTEINS; CONSERVED SEQUENCE; GLYCEROPHOSPHOLIPIDS; HUMANS; LIPID METABOLISM; PHOSPHATIDYLINOSITOL PHOSPHATES; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, STEROID; ZEBRAFISH PROTEINS;

EID: 84898781085     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2013.12.002     Document Type: Article

References (47)

1. G. van Meer, D.R. Voelker, and G.W. Feigenson Membrane lipids: where they are and how they behave Nat. Rev. Mol. Cell Biol. 9 2008 112 124
2. M.P. Wymann, and R. Schneiter Lipid signalling in disease Nat. Rev. Mol. Cell Biol. 9 2008 162 176
3. V.M. Olkkonen, O. Béaslas, and E. Nissilä Oxysterols and their cellular effectors Biomolecules 2 2012 76 103
4. A.D. Gillon, C.F. Latham, and E.A. Miller Vesicle-mediated ER export of proteins and lipids Biochim. Biophys. Acta 2012 1821 1040 1049
5. G. van Meer, and H. Sprong Membrane lipids and vesicular traffic Curr. Opin. Cell Biol. 16 2004 373 378
6. S. Lev Non-vesicular lipid transport by lipid-transfer proteins and beyond Nat. Rev. Mol. Cell Biol. 11 2010 739 750
7. Y. Elbaz, and M. Schuldiner Staying in touch: the molecular era of organelle contact sites Trends Biochem. Sci. 36 2011 616 623
8. T. Levine, and C. Loewen Inter-organelle membrane contact sites: through a glass, darkly Curr. Opin. Cell Biol. 18 2006 371 378
9. C.J. Stefan, A.G. Manford, and S.D. Emr ER-PM connections: sites of information transfer and inter-organelle communication Curr. Opin. Cell Biol. 25 2013 434 442
10. A. Toulmay, and W.A. Prinz Lipid transfer and signaling at organelle contact sites: the tip of the iceberg Curr. Opin. Cell Biol. 23 2011 458 463
11. C.J. Loewen, A. Roy, and T.P. Levine A conserved ER targeting motif in three families of lipid binding proteins and in Opi1p binds VAP EMBO J. 22 2003 2025 2035
12. V.M. Olkkonen, and T.P. Levine Oxysterol binding proteins: in more than one place at one time? Biochem. Cell Biol. 82 2004 87 98
13. A.M. Anniss, J. Apostolopoulos, S. Dworkin, L.E. Purton, and R.L. Sparrow An oxysterol-binding protein family identified in the mouse DNA Cell Biol. 21 2002 571 580
14. C.J. Jaworski, E. Moreira, A. Li, R. Lee, and I.R. Rodriguez A family of 12 human genes containing oxysterol-binding domains Genomics 78 2001 185 196
15. M. Lehto, S. Laitinen, G. Chinetti, M. Johansson, C. Ehnholm, B. Staels, E. Ikonen, and V.M. Olkkonen The OSBP-related protein family in humans J. Lipid Res. 42 2001 1203 1213
16. C.T. Beh, L. Cool, J. Phillips, and J. Rine Overlapping functions of the yeast oxysterol-binding protein homologues Genetics 157 2001 1117 1140
17. Y.J. Im, S. Raychaudhuri, W.A. Prinz, and J.H. Hurley Structural mechanism for sterol sensing and transport by OSBP-related proteins Nature 437 2005 154 158
18. V.M. Olkkonen, and S. Li Oxysterol-binding proteins: sterol and phosphoinositide sensors coordinating transport, signaling and metabolism Prog. Lipid Res. 52 2013 529 538
19. S. Raychaudhuri, Y.J. Im, J.H. Hurley, and W.A. Prinz Nonvesicular sterol movement from plasma membrane to ER requires oxysterol-binding protein-related proteins and phosphoinositides J. Cell Biol. 173 2006 107 119
20. T.A. Schulz, M.G. Choi, S. Raychaudhuri, J.A. Mears, R. Ghirlando, J.E. Hinshaw, and W.A. Prinz Lipid-regulated sterol transfer between closely apposed membranes by oxysterol-binding protein homologues J. Cell Biol. 187 2009 889 903
21. A.G. Georgiev, D.P. Sullivan, M.C. Kersting, J.S. Dittman, C.T. Beh, and A.K. Menon Osh proteins regulate membrane sterol organization but are not required for sterol movement between the ER and PM Traffic 12 2011 1341 1355
22. G. Alfaro, J. Johansen, S.A. Dighe, G. Duamel, K.G. Kozminski, and C.T. Beh The sterol-binding protein Kes1/Osh4p is a regulator of polarized exocytosis Traffic 12 2011 1521 1536
23. C.J. Mousley, P. Yuan, N.A. Gaur, K.D. Trettin, A.H. Nile, S.J. Deminoff, B.J. Dewar, M. Wolpert, J.M. Macdonald, P.K. Herman, A.G. Hinnebusch, and V.A. Bankaitis A sterol-binding protein integrates endosomal lipid metabolism with TOR signaling and nitrogen sensing Cell 148 2012 702 715
24. B. Mesmin, J. Bigay, J. Moser von Filseck, S. Lacas-Gervais, G. Drin, and B. Antonny A four-step cycle driven by PI(4)P hydrolysis directs sterol/PI(4)P exchange by the ER-Golgi tether OSBP Cell 155 2013 830 843
25. J. Tong, H. Yang, H. Yang, S.H. Eom, and Y.J. Im Structure of Osh3 reveals a conserved mode of phosphoinositide binding in oxysterol-binding proteins Structure 21 2013 1203 1213
26. H. Berman, K. Henrick, and H. Nakamura Announcing the worldwide Protein Data Bank Nat. Struct. Biol. 10 2003 980
27. E. Kvam, and D.S. Goldfarb Nvj1p is the outer-nuclear-membrane receptor for oxysterol-binding protein homolog Osh1p in Saccharomyces cerevisiae J. Cell Sci. 117 2004 4959 4968
28. T.P. Levine, and S. Munro Dual targeting of Osh1p, a yeast homologue of oxysterol-binding protein, to both the Golgi and the nucleus-vacuole junction Mol. Biol. Cell 12 2001 1633 1644
29. P. Wang, W. Duan, A.L. Munn, and H. Yang Molecular characterization of Osh6p, an oxysterol binding protein homolog in the yeast Saccharomyces cerevisiae FEBS J. 272 2005 4703 4715
30. C.J. Stefan, A.G. Manford, D. Baird, J. Yamada-Hanff, Y. Mao, and S.D. Emr Osh proteins regulate phosphoinositide metabolism at ER-plasma membrane contact sites Cell 144 2011 389 401
31. S. Tavassoli, J.T. Chao, B.P. Young, R.C. Cox, W.A. Prinz, A.I.P.M. de Kroon, and C.J.R. Loewen Plasma membrane-endoplasmic reticulum contact sites regulate phosphatidylcholine synthesis EMBO Rep. 14 2013 434 440
32. M. Johansson, M. Lehto, K. Tanhuanpää, T.L. Cover, and V.M. Olkkonen The oxysterol-binding protein homologue ORP1L interacts with Rab7 and alters functional properties of late endocytic compartments Mol. Biol. Cell 16 2005 5480 5492
33. R. van der Kant, A. Fish, L. Janssen, H. Janssen, S. Krom, N. Ho, T. Brummelkamp, J. Carette, N. Rocha, and J. Neefjes Late endosomal transport and tethering are coupled processes controlled by RILP and the cholesterol sensor ORP1L J. Cell Sci. 126 2013 3462 3474
34. M. Johansson, N. Rocha, W. Zwart, I. Jordens, L. Janssen, C. Kuijl, V.M. Olkkonen, and J. Neefjes Activation of endosomal dynein motors by stepwise assembly of Rab7-RILP-p150Glued, ORP1L, and the receptor betalll spectrin J. Cell Biol. 176 2007 459 471
35. T. Vihervaara, R.L. Uronen, G. Wohlfahrt, I. Björkhem, E. Ikonen, and V.M. Olkkonen Sterol binding by OSBP-related protein 1L regulates late endosome motility and function Cell Mol. Life Sci. 68 2011 537 551
36. T. Vihervaara, R. Käkelä, G. Liebisch, K. Tarasov, G. Schmitz, and V.M. Olkkonen Modification of the lipidome in RAW264.7 macrophage subjected to stable silencing of oxysterol-binding proteins Biochimie 95 2013 538 547
37. M. de Saint-Jean, V. Delfosse, D. Douguet, G. Chicanne, B. Payrastre, W. Bourguet, B. Antonny, and G. Drin Osh4p exchanges sterols for phosphatidylinositol 4-phosphate between lipid bilayers J. Cell Biol. 195 2011 965 978
38. K. Maeda, K. Anand, A. Chiapparino, A. Kumar, M. Poletto, M. Kaksonen, and A.C. Gavin Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins Nature 501 2013 257 261
39. O. Béaslas, J. Metso, E. Nissilä, P.P. Laurila, E. Kaiharju, K.C. Batchu, L. Kaipiainen, M.I. Mäyränpää, D. Yan, H. Gylling, M. Jauhiainen, and V.M. Olkkonen Osbpl8 deficiency in mouse causes an elevation of high-density lipoproteins and gender-specific alterations of lipid metabolism PLoS One 8 2013 e58856
40. O. Udagawa, C. Ito, N. Ogonuki, H. Sato, S. Lee, P. Tripvanuntakul, I. Ichi, Y. Uchida, T. Nishimura, M. Murakami, A. Ogura, T. Inoue, K. Toshimori, and H. Arai Oligo-astheno-teratozoospermia in mice lacking ORP4, a sterol-binding protein in the OSBP-related protein family Genes Cells 2013 10.1111/gtc.12105 [Epub ahead of print]
41. G.K. Varshney, J. Lu, D.E. Gildea, H. Huang, W. Pei, Z. Yang, S.C. Huang, D. Schoenfeld, N.H. Pho, D. Casero, T. Hirase, D. Mosbrook-Davis, S. Zhang, L.E. Jao, B. Zhang, I.G. Woods, S. Zimmerman, A.F. Schier, T.G. Wolfsberg, M. Pellegrini, S.M. Burgess, and S. Lin A large-scale zebrafish gene knockout resource for the genome-wide study of gene function Genome Res. 23 2013 727 735
42. X. Meng, M.B. Noyes, L.J. Zhu, N.D. Lawson, and S.A. Wolfe Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases Nat. Biotechnol. 26 2008 695 701
43. Y. Doyon, J.M. McCammon, J.C. Miller, F. Faraji, C. Ngo, G.E. Katibah, R. Amora, T.D. Hocking, L. Zhang, E.J. Rebar, P.D. Gregory, F.D. Urnov, and S.L. Amacher Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases Nat. Biotechnol. 26 2008 702 708
44. A. Nasevicius, and S.C. Ekker Effective targeted gene 'knockdown' in zebrafish Nat. Genet. 26 2000 216 220
45. M. Hölttä-Vuori, V.T. Salo, L. Nyberg, C. Brackmann, A. Enejder, P. Panula, and E. Ikonen Zebrafish: gaining popularity in lipid research Biochem. J. 429 2010 235 242
46. L. Fang, and Y.I. Miller Emerging applications for zebrafish as a model organism to study oxidative mechanisms and their roles in inflammation and vascular accumulation of oxidized lipids Free Radic. Biol. Med. 53 2012 1411 1420
47. X. Du, J. Kumar, C. Ferguson, T.A. Schulz, Y.S. Ong, W. Hong, W.A. Prinz, R.G. Parton, A.J. Brown, and H. Yang A role for oxysterol-binding protein-related protein 5 in endosomal cholesterol trafficking J. Cell Biol. 192 2011 121 135