메뉴 건너뛰기




Volumn 2, Issue 3, 2013, Pages 471-481

A novel L-isoleucine-4′-dioxygenase and L-isoleucine dihydroxylation cascade in Pantoea ananatis

Author keywords

4 Hydroxyisoleucine; Furanones; Pantoea ananatis; Plant pathogenic bacteria; Pseudomonas syringae; Quorum sensing

Indexed keywords

4 HYDROXYISOLEUCINE 2 OXOGLUTARATE OXYGEN OXIDOREDUCTASE; BACTERIAL PROTEIN; ISOLEUCINE; ISOLEUCINE 2 OXOGLUTARATE OXYGEN OXIDOREDUCTASE; ISOLEUCINE 4' DIOXYGENASE; OXIDOREDUCTASE; UNCLASSIFIED DRUG;

EID: 84897923733     PISSN: None     EISSN: 20458827     Source Type: Journal    
DOI: 10.1002/mbo3.87     Document Type: Article
Times cited : (13)

References (32)
  • 1
    • 0001693554 scopus 로고    scopus 로고
    • Formation of 3-Hydroxy-4,5-dimethyl-2(5H)-furanone (Sotolone) from 4-Hydroxy-l-isoleucine and 3-Amino-4,5-dimethyl-3,4-dihydro-2(5H)-furanone
    • doi:10.1021/jf9506702
    • Blank, I., J. Lin, R. Fumeaux, D. H. Welti, and L. B. Fay . 1996. Formation of 3-Hydroxy-4, 5-dimethyl-2(5H)-furanone (Sotolone) from 4-Hydroxy-l-isoleucine and 3-Amino-4, 5-dimethyl-3, 4-dihydro-2(5H)-furanone. J. Agri. Food Chem. 44:1851-1856. doi:10.1021/jf9506702
    • (1996) J. Agri. Food Chem. , vol.44 , pp. 1851-1856
    • Blank, I.1    Lin, J.2    Fumeaux, R.3    Welti, D.H.4    Fay, L.B.5
  • 2
    • 0022432255 scopus 로고
    • Improved oligonucleotide site-directed mutagenesis using M13 vectors
    • Carter, P., H. Bedouelle, and G. Winter . 1985. Improved oligonucleotide site-directed mutagenesis using M13 vectors. Nucleic Acids Res. 13:4431-4443.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 4431-4443
    • Carter, P.1    Bedouelle, H.2    Winter, G.3
  • 3
    • 67849130550 scopus 로고    scopus 로고
    • Biological control of grapevine crown gall: purification and partial characterisation of an antibacterial substance produced by Rahnella aquatilis strain HX2
    • doi:10.1007/s10658-009-9429-z
    • Chen, F., J.-Y. Li, Y.-B. Guo, J.-H. Wang, and H.-M. Wang . 2009. Biological control of grapevine crown gall: purification and partial characterisation of an antibacterial substance produced by Rahnella aquatilis strain HX2. Eur. J. Plant Pathol. 124:427-437. doi:10.1007/s10658-009-9429-z
    • (2009) Eur. J. Plant Pathol. , vol.124 , pp. 427-437
    • Chen, F.1    Li, J.-Y.2    Guo, Y.-B.3    Wang, J.-H.4    Wang, H.-M.5
  • 4
    • 77952555419 scopus 로고    scopus 로고
    • Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback
    • doi:10.1128/JB.00060-10
    • De Maayer, P., W. Y. Chan, S. N. Venter, I. K. Toth, P. R. Birch, F. Joubert, et al. 2010. Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. J. Bacteriol. 192:2936-2937. doi:10.1128/JB.00060-10
    • (2010) J. Bacteriol. , vol.192 , pp. 2936-2937
    • De Maayer, P.1    Chan, W.Y.2    Venter, S.N.3    Toth, I.K.4    Birch, P.R.5    Joubert, F.6
  • 5
    • 84857966041 scopus 로고    scopus 로고
    • Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342
    • doi:10.1128/JB.06715-11
    • De Maayer, P., W. Y. Chan, F. Rezzonico, A. Buhlmann, S. N. Venter, J. Blom, et al. 2012. Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342. J. Bacteriol. 194:1615-1616. doi:10.1128/JB.06715-11
    • (2012) J. Bacteriol. , vol.194 , pp. 1615-1616
    • De Maayer, P.1    Chan, W.Y.2    Rezzonico, F.3    Buhlmann, A.4    Venter, S.N.5    Blom, J.6
  • 6
    • 0032745552 scopus 로고    scopus 로고
    • Pharmaceutically active secondary metabolites of microorganisms
    • Demain, A. L. 1999. Pharmaceutically active secondary metabolites of microorganisms. Appl. Microbiol. Biotechnol 52:455-463.
    • (1999) Appl. Microbiol. Biotechnol , vol.52 , pp. 455-463
    • Demain, A.L.1
  • 7
    • 78651408197 scopus 로고    scopus 로고
    • Quorum sensing in Gram-negative bacteria: small-molecule modulation of AHL and AI-2 quorum sensing pathways
    • doi:10.1021/cr100109t
    • Galloway, W. R., J. T. Hodgkinson, S. D. Bowden, M. Welch, and D. R. Spring . 2011. Quorum sensing in Gram-negative bacteria: small-molecule modulation of AHL and AI-2 quorum sensing pathways. Chem. Rev. 111:28-67. doi:10.1021/cr100109t
    • (2011) Chem. Rev. , vol.111 , pp. 28-67
    • Galloway, W.R.1    Hodgkinson, J.T.2    Bowden, S.D.3    Welch, M.4    Spring, D.R.5
  • 8
    • 33645978063 scopus 로고    scopus 로고
    • Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence
    • doi:10.1021/np058128n
    • Gunatilaka, A. A. L. 2006. Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence. J. Nat. Prod. 69:509-526. doi:10.1021/np058128n
    • (2006) J. Nat. Prod. , vol.69 , pp. 509-526
    • Gunatilaka, A.A.L.1
  • 9
    • 84856265086 scopus 로고    scopus 로고
    • The complete genome sequence of Pantoea ananatis AJ13355, an organism with great biotechnological potential
    • doi:10.1007/s00253-011-3713-5
    • Hara, Y., N. Kadotani, H. Izui, J. I. Katashkina, T. M. Kuvaeva, I. G. Andreeva, et al. 2011. The complete genome sequence of Pantoea ananatis AJ13355, an organism with great biotechnological potential. Appl. Microbiol. Biotechnol 93:331-341. doi:10.1007/s00253-011-3713-5
    • (2011) Appl. Microbiol. Biotechnol , vol.93 , pp. 331-341
    • Hara, Y.1    Kadotani, N.2    Izui, H.3    Katashkina, J.I.4    Kuvaeva, T.M.5    Andreeva, I.G.6
  • 10
    • 82955178462 scopus 로고    scopus 로고
    • Characterization of Bacillus thuringiensis l-isoleucine dioxygenase for production of useful amino acids
    • doi:10.1128/AEM.05035-11
    • Hibi, M., T. Kawashima, T. Kodera, S. V. Smirnov, P. M. Sokolov, M. Sugiyama, et al. 2011. Characterization of Bacillus thuringiensis l-isoleucine dioxygenase for production of useful amino acids. Appl. Environ. Microbiol. 77:6926-6930. doi:10.1128/AEM.05035-11
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 6926-6930
    • Hibi, M.1    Kawashima, T.2    Kodera, T.3    Smirnov, S.V.4    Sokolov, P.M.5    Sugiyama, M.6
  • 11
    • 0037462759 scopus 로고    scopus 로고
    • Guanine nucleotides guanosine 5′-diphosphate 3′-diphosphate and GTP co-operatively regulate the production of an antibiotic bacilysin in Bacillus subtilis
    • doi:10.1074/jbc.M208722200
    • Inaoka, T., K. Takahashi, M. Ohnishi-Kameyama, M. Yoshida, and K. Ochi . 2003. Guanine nucleotides guanosine 5′-diphosphate 3′-diphosphate and GTP co-operatively regulate the production of an antibiotic bacilysin in Bacillus subtilis. J. Biol. Chem. 278:2169-2176. doi:10.1074/jbc.M208722200
    • (2003) J. Biol. Chem. , vol.278 , pp. 2169-2176
    • Inaoka, T.1    Takahashi, K.2    Ohnishi-Kameyama, M.3    Yoshida, M.4    Ochi, K.5
  • 12
    • 63849095796 scopus 로고    scopus 로고
    • 4-Hydroxyisoleucine: a plant-derived treatment for metabolic syndrome
    • Jette, L., L. Harvey, K. Eugeni, and N. Levens . 2009. 4-Hydroxyisoleucine: a plant-derived treatment for metabolic syndrome. Curr. Opin. Investig. Drugs 10:353-358.
    • (2009) Curr. Opin. Investig. Drugs , vol.10 , pp. 353-358
    • Jette, L.1    Harvey, L.2    Eugeni, K.3    Levens, N.4
  • 13
    • 24944453122 scopus 로고    scopus 로고
    • Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition
    • doi:10.1128/JB.187.18.6488-6498.2005
    • Joardar, V., M. Lindeberg, R. W. Jackson, J. Selengut, R. Dodson, L. M. Brinkac, et al. 2005. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. J. Bacteriol. 187:6488-6498. doi:10.1128/JB.187.18.6488-6498.2005
    • (2005) J. Bacteriol. , vol.187 , pp. 6488-6498
    • Joardar, V.1    Lindeberg, M.2    Jackson, R.W.3    Selengut, J.4    Dodson, R.5    Brinkac, L.M.6
  • 14
    • 70449705819 scopus 로고    scopus 로고
    • A novel l-isoleucine hydroxylating enzyme, l-isoleucine dioxygenase from Bacillus thuringiensis, produces (2S,3R,4S)-4-hydroxyisoleucine
    • doi:10.1016/j.bbrc.2009.09.126
    • Kodera, T., S. V. Smirnov, N. N. Samsonova, Y. I. Kozlov, R. Koyama, M. Hibi, et al. 2009. A novel l-isoleucine hydroxylating enzyme, l-isoleucine dioxygenase from Bacillus thuringiensis, produces (2S, 3R, 4S)-4-hydroxyisoleucine. Biochem. Biophys. Res. Commun. 390:506-510. doi:10.1016/j.bbrc.2009.09.126
    • (2009) Biochem. Biophys. Res. Commun. , vol.390 , pp. 506-510
    • Kodera, T.1    Smirnov, S.V.2    Samsonova, N.N.3    Kozlov, Y.I.4    Koyama, R.5    Hibi, M.6
  • 15
    • 0037341767 scopus 로고    scopus 로고
    • Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli
    • doi:10.1016/s0923-2508(03)00036-6
    • Livshits, V. A., N. P. Zakataeva, V. V. Aleshin, and M. V. Vitushkina . 2003. Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli. Res. Microbiol. 154:123-135. doi:10.1016/s0923-2508(03)00036-6
    • (2003) Res. Microbiol. , vol.154 , pp. 123-135
    • Livshits, V.A.1    Zakataeva, N.P.2    Aleshin, V.V.3    Vitushkina, M.V.4
  • 16
    • 33646363016 scopus 로고    scopus 로고
    • An assay for Fe(II)/2-oxoglutarate-dependent dioxygenases by enzyme-coupled detection of succinate formation
    • doi:10.1016/j.ab.2006.03.033
    • Luo, L., M. B. Pappalardi, P. J. Tummino, R. A. Copeland, M. E. Fraser, P. K. Grzyska, et al. 2006. An assay for Fe(II)/2-oxoglutarate-dependent dioxygenases by enzyme-coupled detection of succinate formation. Anal. Biochem. 353:69-74. doi:10.1016/j.ab.2006.03.033
    • (2006) Anal. Biochem. , vol.353 , pp. 69-74
    • Luo, L.1    Pappalardi, M.B.2    Tummino, P.J.3    Copeland, R.A.4    Fraser, M.E.5    Grzyska, P.K.6
  • 17
    • 84864003719 scopus 로고    scopus 로고
    • Complete genome sequence of Rahnella aquatilis CIP 78.65
    • doi:10.1128/JB.00380-12
    • Martinez, R. J., D. Bruce, C. Detter, L. A. Goodwin, J. Han, C. S. Han, et al. 2012. Complete genome sequence of Rahnella aquatilis CIP 78.65. J. Bacteriol. 194:3020-3021. doi:10.1128/JB.00380-12
    • (2012) J. Bacteriol. , vol.194 , pp. 3020-3021
    • Martinez, R.J.1    Bruce, D.2    Detter, C.3    Goodwin, L.A.4    Han, J.5    Han, C.S.6
  • 18
    • 79953305831 scopus 로고    scopus 로고
    • Insects as alternative hosts for phytopathogenic bacteria
    • doi:10.1111/j.1574-6976.2011.00264.x
    • Nadarasah, G., and J. Stavrinides . 2011. Insects as alternative hosts for phytopathogenic bacteria. FEMS Microbiol. Rev. 35:555-575. doi:10.1111/j.1574-6976.2011.00264.x
    • (2011) FEMS Microbiol. Rev. , vol.35 , pp. 555-575
    • Nadarasah, G.1    Stavrinides, J.2
  • 19
    • 79952575690 scopus 로고    scopus 로고
    • A novel l-isoleucine metabolism in Bacillus thuringiensis generating (2S,3R,4S)-4-hydroxyisoleucine, a potential insulinotropic and anti-obesity amino acid
    • doi:10.1007/s00253-010-2983-7
    • Ogawa, J., T. Kodera, S. V. Smirnov, M. Hibi, N. N. Samsonova, R. Koyama, et al. 2011. A novel l-isoleucine metabolism in Bacillus thuringiensis generating (2S, 3R, 4S)-4-hydroxyisoleucine, a potential insulinotropic and anti-obesity amino acid. Appl. Microbiol. Biotechnol 89:1929-1938. doi:10.1007/s00253-010-2983-7
    • (2011) Appl. Microbiol. Biotechnol , vol.89 , pp. 1929-1938
    • Ogawa, J.1    Kodera, T.2    Smirnov, S.V.3    Hibi, M.4    Samsonova, N.N.5    Koyama, R.6
  • 20
    • 0017752520 scopus 로고
    • Microbial production of vitamin B12 antimetabolites: II. 2-Amino-4-keto-3-methylpentanoic acids from bacillus cereus 439
    • doi:10.1016/0045-2068(77)90028-1
    • Perlman, D., K. L. Perlman, M. Bodanszky, A. Bodanszky, R. L. Foltz, and H. W. Matthews . 1977. Microbial production of vitamin B12 antimetabolites: II. 2-Amino-4-keto-3-methylpentanoic acids from bacillus cereus 439. Bioorg. Chem. 6:263-271. doi:10.1016/0045-2068(77)90028-1
    • (1977) Bioorg. Chem. , vol.6 , pp. 263-271
    • Perlman, D.1    Perlman, K.L.2    Bodanszky, M.3    Bodanszky, A.4    Foltz, R.L.5    Matthews, H.W.6
  • 21
    • 84867904491 scopus 로고    scopus 로고
    • The use of endophytes to obtain bioactive compounds and their application in biotransformation process
    • 576286 doi: 10.4061/2011/576286
    • Pimentel, M. R., G. Molina, A. P. Dionísio, M. R. Maróstica Junior, and G. M. Pastore . 2011. The use of endophytes to obtain bioactive compounds and their application in biotransformation process. Biotechnol. Res. Int. 2011: 576286, 11pp. doi: 10.4061/2011/576286
    • (2011) Biotechnol. Res. Int , vol.2011 , pp. 11
    • Pimentel, M.R.1    Molina, G.2    Dionísio, A.P.3    Maróstica Junior, M.R.4    Pastore, G.M.5
  • 22
    • 79551533113 scopus 로고    scopus 로고
    • Genome sequence analyses of Pseudomonas savastanoi pv. glycinea and subtractive hybridization-based comparative genomics with nine pseudomonads
    • doi:10.1371/journal.pone.0016451
    • Qi, M., D. Wang, C. A. Bradley, and Y. Zhao . 2011. Genome sequence analyses of Pseudomonas savastanoi pv. glycinea and subtractive hybridization-based comparative genomics with nine pseudomonads. PLoS ONE 6:e16451. doi:10.1371/journal.pone.0016451
    • (2011) PLoS ONE , vol.6
    • Qi, M.1    Wang, D.2    Bradley, C.A.3    Zhao, Y.4
  • 23
    • 0027446708 scopus 로고
    • Molecular biology of the LysR family of transcriptional regulators
    • doi:10.1146/annurev.mi.47.100193.003121
    • Schell, M. A. 1993. Molecular biology of the LysR family of transcriptional regulators. Annu. Rev. Microbiol. 47:597-626. doi:10.1146/annurev.mi.47.100193.003121
    • (1993) Annu. Rev. Microbiol. , vol.47 , pp. 597-626
    • Schell, M.A.1
  • 24
    • 79955114649 scopus 로고    scopus 로고
    • Anticancer drugs from marine flora: an overview
    • 2010, doi:10.1155/2010/214186, 214186
    • Sithranga Boopathy, N., and K. Kathiresan . 2010. Anticancer drugs from marine flora: an overview. J. Oncol. 2010:214186, 18 pp. doi:10.1155/2010/214186
    • (2010) J. Oncol. , pp. 18
    • Sithranga Boopathy, N.1    Kathiresan, K.2
  • 26
    • 84861229491 scopus 로고    scopus 로고
    • A novel family of bacterial dioxygenases that catalyse the hydroxylation of free l-amino acids
    • doi:10.1111/j.1574-6968.2012.02558.x
    • Smirnov, S. V., P. M. Sokolov, T. Kodera, M. Sugiyama, M. Hibi, S. Shimizu, et al. 2012. A novel family of bacterial dioxygenases that catalyse the hydroxylation of free l-amino acids. FEMS Microbiol. Lett. 331:97-104. doi:10.1111/j.1574-6968.2012.02558.x
    • (2012) FEMS Microbiol. Lett. , vol.331 , pp. 97-104
    • Smirnov, S.V.1    Sokolov, P.M.2    Kodera, T.3    Sugiyama, M.4    Hibi, M.5    Shimizu, S.6
  • 27
    • 0038367945 scopus 로고    scopus 로고
    • Endophytes as sources of bioactive products
    • doi:10.1016/s1286-4579(03)00073-x
    • Strobel, G. A. 2003. Endophytes as sources of bioactive products. Microbes Infect. 5:535-544. doi:10.1016/s1286-4579(03)00073-x
    • (2003) Microbes Infect. , vol.5 , pp. 535-544
    • Strobel, G.A.1
  • 28
    • 22544447354 scopus 로고    scopus 로고
    • ywfE in Bacillus subtilis codes for a novel enzyme, l-amino acid ligase
    • doi:10.1128/JB.187.15.5195-5202.2005
    • Tabata, K., H. Ikeda, and S. Hashimoto . 2005. ywfE in Bacillus subtilis codes for a novel enzyme, l-amino acid ligase. J. Bacteriol. 187:5195-5202. doi:10.1128/JB.187.15.5195-5202.2005
    • (2005) J. Bacteriol. , vol.187 , pp. 5195-5202
    • Tabata, K.1    Ikeda, H.2    Hashimoto, S.3
  • 29
    • 79251595178 scopus 로고    scopus 로고
    • Unexpected applications of secondary metabolites
    • doi:10.1016/j.biotechadv.2010.11.006
    • Vaishnav, P., and A. L. Demain . 2011. Unexpected applications of secondary metabolites. Biotechnol. Adv. 29:223-229. doi:10.1016/j.biotechadv.2010.11.006
    • (2011) Biotechnol. Adv. , vol.29 , pp. 223-229
    • Vaishnav, P.1    Demain, A.L.2
  • 30
    • 0020442864 scopus 로고
    • The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers
    • Vieira, J., and J. Messing . 1982. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19:259-268.
    • (1982) Gene , vol.19 , pp. 259-268
    • Vieira, J.1    Messing, J.2
  • 31
    • 76849103858 scopus 로고    scopus 로고
    • A previously uncharacterized gene, yjfO (bsmA), influences Escherichia coli biofilm formation and stress response
    • doi:10.1099/mic.0.031468-0
    • Weber, M. M., C. L. French, M. B. Barnes, D. A. Siegele, and R. J. C. McLean . 2010. A previously uncharacterized gene, yjfO (bsmA), influences Escherichia coli biofilm formation and stress response. Microbiology 156:139-147. doi:10.1099/mic.0.031468-0
    • (2010) Microbiology , vol.156 , pp. 139-147
    • Weber, M.M.1    French, C.L.2    Barnes, M.B.3    Siegele, D.A.4    McLean, R.J.C.5
  • 32
    • 58149202163 scopus 로고    scopus 로고
    • HMDB: a knowledgebase for the human metabolome
    • doi:10.1093/nar/gkn810., Data issue
    • Wishart, D. S., C. Knox, A. C. Guo, R. Eisner, N. Young, B. Gautam, et al. 2009. HMDB: a knowledgebase for the human metabolome. Nucleic Acids Res. 37(Data issue):D603-D610 doi:10.1093/nar/gkn810.
    • (2009) Nucleic Acids Res. , vol.37
    • Wishart, D.S.1    Knox, C.2    Guo, A.C.3    Eisner, R.4    Young, N.5    Gautam, B.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.