메뉴 건너뛰기




Volumn 9, Issue 3, 2014, Pages

Characterization of intestinal bacteria in wild and domesticated adult black tiger shrimp (Penaeus monodon)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84897552321     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0091853     Document Type: Article
Times cited : (237)

References (81)
  • 4
    • 0036399823 scopus 로고    scopus 로고
    • How host-microbial interactions shape the nutrient environment of the mammalian intestine
    • DOI 10.1146/annurev.nutr.22.011602.092259
    • Hooper LV, Midtvedt T, Gordon JI (2002) How host-microbial interactions shape the nutrient environment of the mammalian intestine. Annu Rev Nutr 22: 283-307. (Pubitemid 35221463)
    • (2002) Annual Review of Nutrition , vol.22 , pp. 283-307
    • Hooper, L.V.1    Midwedt, T.2    Gordon, J.I.3
  • 7
    • 0035793372 scopus 로고    scopus 로고
    • Molecular analysis of commensal host-microbial relationships in the intestine
    • DOI 10.1126/science.291.5505.881
    • Hooper LV, Wong MH, Thelin A, Hansson L, Falk PG, et al. (2001) Molecular analysis of commensal host-microbial relationships in the intestine. Science 291: 881-884. (Pubitemid 32120760)
    • (2001) Science , vol.291 , Issue.5505 , pp. 881-884
    • Hooper, L.V.1    Wong, M.H.2    Thelin, A.3    Hansson, L.4    Falk, P.G.5    Gordon, J.I.6
  • 9
    • 0034044522 scopus 로고    scopus 로고
    • Microecology of the termite gut: Structure and function on a microscale
    • DOI 10.1016/S1369-5274(00)00087-4
    • Brune A, Friedrich M (2000) Microecology of the termite gut: structure and function on a microscale. Curr Opin Microbiol 3: 263-269. (Pubitemid 30368059)
    • (2000) Current Opinion in Microbiology , vol.3 , Issue.3 , pp. 263-269
    • Brune, A.1    Friedrich, M.2
  • 11
    • 56849106496 scopus 로고    scopus 로고
    • The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing
    • Dethlefsen L, Huse S, Sogin ML, Relman DA (2008) The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing. PLoS Biol 6: e280.
    • (2008) PLoS Biol , vol.6
    • Dethlefsen, L.1    Huse, S.2    Sogin, M.L.3    Relman, D.A.4
  • 12
    • 35348961403 scopus 로고    scopus 로고
    • An ecological and evolutionary perspective on humang-microbe mutualism and disease
    • DOI 10.1038/nature06245, PII NATURE06245
    • Dethlefsen L, McFall-Ngai M, Relman DA (2007) An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature 449: 811-818. (Pubitemid 47598621)
    • (2007) Nature , vol.449 , Issue.7164 , pp. 811-818
    • Dethlefsen, L.1    McFall-Ngai, M.2    Relman, D.A.3
  • 13
    • 33749997498 scopus 로고    scopus 로고
    • Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-free Recipients Reveal Host Habitat Selection
    • DOI 10.1016/j.cell.2006.08.043, PII S0092867406012268
    • Rawls JF, Mahowald MA, Ley RE, Gordon JI (2006) Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 127: 423-433. (Pubitemid 44572375)
    • (2006) Cell , vol.127 , Issue.2 , pp. 423-433
    • Rawls, J.F.1    Mahowald, M.A.2    Ley, R.E.3    Gordon, J.I.4
  • 14
    • 80054862011 scopus 로고    scopus 로고
    • Bile Acid Is a Host Factor That Regulates the Composition of the Cecal Microbiota in Rats
    • Islam KBMS, Fukiya S, Hagio M, Fujii N, Ishizuka S, et al. (2011) Bile Acid Is a Host Factor That Regulates the Composition of the Cecal Microbiota in Rats. Gastroenterology 141: 1773-1781.
    • (2011) Gastroenterology , vol.141 , pp. 1773-1781
    • Islam, K.B.M.S.1    Fukiya, S.2    Hagio, M.3    Fujii, N.4    Ishizuka, S.5
  • 17
    • 33947186284 scopus 로고    scopus 로고
    • Metabolic diversity of the intestinal microbiota: Implications for health and disease
    • Blaut M, Clavel T (2007) Metabolic diversity of the intestinal microbiota: implications for health and disease. J Nutr 137: 751S-755S. (Pubitemid 46397515)
    • (2007) Journal of Nutrition , vol.137 , Issue.3
    • Blaut, M.1    Clavel, T.2
  • 19
    • 0032171057 scopus 로고    scopus 로고
    • Effects of a probiotic bacterium on black tiger shrimp Penaeus monodon survival and growth
    • DOI 10.1016/S0044-8486(98)00305-6, PII S0044848698003056
    • Rengpipat S, Phianphak W, Piyatiratitivorakul S, Menasveta P (1998) Effects of a probiotic bacterium on black tiger shrimp Penaeus monodon survival and growth. Aquaculture 167: 301-313. (Pubitemid 28485912)
    • (1998) Aquaculture , vol.167 , Issue.3-4 , pp. 301-313
    • Rengpipat, S.1    Phianphak, W.2    Piyatiratitivorakul, S.3    Menasveta, P.4
  • 20
    • 0043269911 scopus 로고    scopus 로고
    • Enhanced growth and resistance to Vibrio challenge in pond-reared black tiger shrimp Penaeus monodon fed a Bacillus probiotic
    • Rengpipat S, Tunyanun A, Fast AW, Piyatiratitivorakul S, Menasveta P (2003) Enhanced growth and resistance to Vibrio challenge in pond-reared black tiger shrimp Penaeus monodon fed a Bacillus probiotic. Dis Aquat Organ 55: 169-173. (Pubitemid 36914513)
    • (2003) Diseases of Aquatic Organisms , vol.55 , Issue.2 , pp. 169-173
    • Rengpipat, S.1    Tunyanun, A.2    Fast, A.W.3    Piyatiratitivorakul, S.4    Menasveta, P.5
  • 21
    • 0032078515 scopus 로고    scopus 로고
    • Recent developments in penaeid broodstock and seed production technologies: Improving the outlook for superior captive stocks
    • Browdy CL (1998) Recent developments in penaeid broodstock and seed production technologies: improving the outlook for superior captive stocks. Aquaculture 164: 3-21.
    • (1998) Aquaculture , vol.164 , pp. 3-21
    • Browdy, C.L.1
  • 23
    • 84890263104 scopus 로고    scopus 로고
    • Genetic analysis of Black Tiger shrimp (Penaeus monodon) across its natural distribution range reveals more recent colonization of Fiji and other South Pacific islands
    • Waqairatu SS, Dierens L, Cowley JA, Dixon TJ, Johnson KN, et al. (2012) Genetic analysis of Black Tiger shrimp (Penaeus monodon) across its natural distribution range reveals more recent colonization of Fiji and other South Pacific islands. Ecol Evol 2: 2057-2071.
    • (2012) Ecol Evol , vol.2 , pp. 2057-2071
    • Waqairatu, S.S.1    Dierens, L.2    Cowley, J.A.3    Dixon, T.J.4    Johnson, K.N.5
  • 24
    • 77953612836 scopus 로고    scopus 로고
    • Innovation cycles, niches and sustainability in the shrimp aquaculture industry in Thailand
    • Lebel L, Mungkung R, Gheewala SH, Lebel P (2010) Innovation cycles, niches and sustainability in the shrimp aquaculture industry in Thailand. Environ Sci Policy 13: 291-302.
    • (2010) Environ Sci Policy , vol.13 , pp. 291-302
    • Lebel, L.1    Mungkung, R.2    Gheewala, S.H.3    Lebel, P.4
  • 25
    • 0036367246 scopus 로고    scopus 로고
    • Bacterial flora from the gut of the wild and cultured banana prawn, Penaeus merguiensis
    • DOI 10.1046/j.1365-2672.2002.01673.x
    • Oxley AP, Shipton W, Owens L, McKay D (2002) Bacterial flora from the gut of the wild and cultured banana prawn, Penaeus merguiensis. J Appl Microbiol 93: 214-223. (Pubitemid 34989139)
    • (2002) Journal of Applied Microbiology , vol.93 , Issue.2 , pp. 214-223
    • Oxley, A.P.A.1    Shipton, W.2    Owens, L.3    McKay, D.4
  • 26
    • 0036690693 scopus 로고    scopus 로고
    • Phylogenetic analysis of intestinal microflora indicates a novel Mycoplasma phylotype in farmed and wild salmon
    • DOI 10.1007/s00248-002-1011-6
    • Holben WE, Williams P, Gilbert M, Saarinen M, Sarkilahti LK, et al. (2002) Phylogenetic analysis of intestinal microflora indicates a novel Mycoplasma phylotype in farmed and wild salmon. Microb Ecol 44: 175-185. (Pubitemid 36941385)
    • (2002) Microbial Ecology , vol.44 , Issue.2 , pp. 175-185
    • Holben, W.E.1    Williams, P.2    Saarinen, M.3    Sarkilahti, L.K.4    Apajalahti, J.H.A.5
  • 27
    • 78650678402 scopus 로고    scopus 로고
    • Changes in the intestinal microbiota of wild Atlantic cod Gadus morhua L. Upon captive rearing
    • Dhanasiri AK, Brunvold L, Brinchmann MF, Korsnes K, Bergh O, et al. (2011) Changes in the intestinal microbiota of wild Atlantic cod Gadus morhua L. upon captive rearing. Microb Ecol 61: 20-30.
    • (2011) Microb Ecol , vol.61 , pp. 20-30
    • Dhanasiri, A.K.1    Brunvold, L.2    Brinchmann, M.F.3    Korsnes, K.4    Bergh, O.5
  • 28
    • 84864374779 scopus 로고    scopus 로고
    • Bacterial Community Associated with the Intestinal Tract of P. Monodon in Commercial Farms
    • Chaiyapechara S, Rungrassamee W, Suriyachay I, Kuncharin Y, Klanchui A, et al. (2011) Bacterial Community Associated with the Intestinal Tract of P. monodon in Commercial Farms. Microb Ecol 63: 938-953.
    • (2011) Microb Ecol , vol.63 , pp. 938-953
    • Chaiyapechara, S.1    Rungrassamee, W.2    Suriyachay, I.3    Kuncharin, Y.4    Klanchui, A.5
  • 29
    • 84875922674 scopus 로고    scopus 로고
    • Bacterial Population in Intestines of the Black Tiger Shrimp (Penaeus monodon) under Different Growth Stages
    • Rungrassamee W, Klanchui A, Chaiyapechara S, Maibunkaew S, Tangphatsornruang S, et al. (2013) Bacterial Population in Intestines of the Black Tiger Shrimp (Penaeus monodon) under Different Growth Stages. PLoS ONE 8: e60802.
    • (2013) PLoS ONE , vol.8
    • Rungrassamee, W.1    Klanchui, A.2    Chaiyapechara, S.3    Maibunkaew, S.4    Tangphatsornruang, S.5
  • 30
    • 85119615244 scopus 로고
    • The food and feeding habit of Penaeus monodon Fabricius collected from Makato River, Aklan, Philippines (Decapoda Natantia)
    • Marte CL (1980) The food and feeding habit of Penaeus monodon Fabricius collected from Makato River, Aklan, Philippines (Decapoda Natantia). Crustaceana 38: 225-236.
    • (1980) Crustaceana , vol.38 , pp. 225-236
    • Marte, C.L.1
  • 32
    • 44149097554 scopus 로고    scopus 로고
    • Pyrosequence analysis of expressed sequence tags for Manduca sexta hemolymph proteins involved in immune responses
    • Zou Z, Najar F, Wang Y, Roe B, Jiang H (2008) Pyrosequence analysis of expressed sequence tags for Manduca sexta hemolymph proteins involved in immune responses. Insect Biochem Mol Biol 38: 677-682.
    • (2008) Insect Biochem Mol Biol , vol.38 , pp. 677-682
    • Zou, Z.1    Najar, F.2    Wang, Y.3    Roe, B.4    Jiang, H.5
  • 33
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
    • Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, et al. (2009) Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities. Appl Environ Microbiol 75: 7537-7541.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3    Hall, J.R.4    Hartmann, M.5
  • 35
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • DOI 10.1128/AEM.00062-07
    • Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267. (Pubitemid 47326658)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.16 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 36
    • 73349110099 scopus 로고    scopus 로고
    • Wrinkles in the rare biosphere: Pyrosequencing errors can lead to artificial inflation of diversity estimates
    • Kunin V, Engelbrektson A, Ochman H, Hugenholtz P (2010) Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. Environ Microbiol 12: 118-123.
    • (2010) Environ Microbiol , vol.12 , pp. 118-123
    • Kunin, V.1    Engelbrektson, A.2    Ochman, H.3    Hugenholtz, P.4
  • 37
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good IJ (1953) The population frequencies of species and the estimation of population parameters. Biometrica 40: 237-264.
    • (1953) Biometrica , vol.40 , pp. 237-264
    • Good, I.J.1
  • 38
    • 33847702910 scopus 로고    scopus 로고
    • MEGAN analysis of metagenomic data
    • DOI 10.1101/gr.5969107
    • Huson DH, Auch AF, Qi J, Schuster SC (2007) MEGAN analysis of metagenomic data. Genome Res 17: 377-386. (Pubitemid 46376747)
    • (2007) Genome Research , vol.17 , Issue.3 , pp. 377-386
    • Huson, D.H.1    Auch, A.F.2    Qi, J.3    Schuster, S.C.4
  • 39
    • 40249113895 scopus 로고    scopus 로고
    • Evaluating different approaches that test whether microbial communities have the same structure
    • Schloss PD (2008) Evaluating different approaches that test whether microbial communities have the same structure. ISME J 2: 265-275.
    • (2008) ISME J , vol.2 , pp. 265-275
    • Schloss, P.D.1
  • 40
    • 0036324293 scopus 로고    scopus 로고
    • Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities
    • Martin AP (2002) Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities. Appl Environ Microbiol 68: 3673-3682.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3673-3682
    • Martin, A.P.1
  • 41
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59: 695-700. (Pubitemid 23072343)
    • (1993) Applied and Environmental Microbiology , vol.59 , Issue.3 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 43
    • 52149085893 scopus 로고    scopus 로고
    • The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains
    • Yarza P, Richter M, Peplies J, Euzeby J, Amann R, et al. (2008) The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. Syst Appl Microbiol 31: 241-250.
    • (2008) Syst Appl Microbiol , vol.31 , pp. 241-250
    • Yarza, P.1    Richter, M.2    Peplies, J.3    Euzeby, J.4    Amann, R.5
  • 45
    • 0032579167 scopus 로고    scopus 로고
    • Lactic acid bacteria in fish: A review
    • DOI 10.1016/S0044-8486(97)00299-8, PII S0044848697002998
    • Ringo E, Gatesoupe F-J (1998) Lactic acid bacteria in fish: a review. Aquaculture 160: 177-203. (Pubitemid 28314114)
    • (1998) Aquaculture , vol.160 , Issue.3-4 , pp. 177-203
    • Ringo, E.1    Gatesoupe, F.-J.2
  • 46
    • 77957020936 scopus 로고    scopus 로고
    • Screening and selection of stress resistant Lactobacillus spp. Isolated from the marine oyster (Crassostrea gigas)
    • Lee H-I, Kim MH, Kim KY, So J-S (2010) Screening and selection of stress resistant Lactobacillus spp. isolated from the marine oyster (Crassostrea gigas). Anaerobe 16: 522-526.
    • (2010) Anaerobe , vol.16 , pp. 522-526
    • Lee, H.-I.1    Kim, M.H.2    Kim, K.Y.3    So, J.-S.4
  • 47
    • 33847243354 scopus 로고    scopus 로고
    • Sediminibacter furfurosus gen. Nov., sp. Nov. And Gilvibacter sediminis gen. Nov., sp. Nov., novel members of the family Flavobacteriaceae
    • Khan ST, Nakagawa Y, Harayama S (2007) Sediminibacter furfurosus gen. nov., sp. nov. and Gilvibacter sediminis gen. nov., sp. nov., novel members of the family Flavobacteriaceae. Int J Syst Evol Microbiol 57: 265-269.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 265-269
    • Khan, S.T.1    Nakagawa, Y.2    Harayama, S.3
  • 48
    • 70350695950 scopus 로고    scopus 로고
    • Microbulbifer donghaiensis sp. Nov., isolated from marine sediment of the East China Sea
    • Wang CS, Wang Y, Xu XW, Zhang DS, Wu YH, et al. (2009) Microbulbifer donghaiensis sp. nov., isolated from marine sediment of the East China Sea. Int J Syst Evol Microbiol 59: 545-549.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 545-549
    • Wang, C.S.1    Wang, Y.2    Xu, X.W.3    Zhang, D.S.4    Wu, Y.H.5
  • 49
    • 67649824105 scopus 로고    scopus 로고
    • Donghicola xiamenensis sp. Nov., a marine bacterium isolated from seawater of the Taiwan Strait in China
    • Tan T, Wang B, Shao Z (2009) Donghicola xiamenensis sp. nov., a marine bacterium isolated from seawater of the Taiwan Strait in China. Int J Syst Evol Microbiol 59: 1143-1147.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1143-1147
    • Tan, T.1    Wang, B.2    Shao, Z.3
  • 50
    • 69449084003 scopus 로고    scopus 로고
    • Tenacibaculum crassostreae sp. Nov., isolated from the Pacific oyster, Crassostrea gigas
    • Lee YS, Baik KS, Park SY, Kim EM, Lee DH, et al. (2009) Tenacibaculum crassostreae sp. nov., isolated from the Pacific oyster, Crassostrea gigas. Int J Syst Evol Microbiol 59: 1609-1614.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1609-1614
    • Lee, Y.S.1    Baik, K.S.2    Park, S.Y.3    Kim, E.M.4    Lee, D.H.5
  • 51
    • 34547478181 scopus 로고    scopus 로고
    • Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales
    • DOI 10.1099/ijs.0.64960-0
    • Lee K, Choo YJ, Giovannoni SJ, Cho JC (2007) Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales. Int J Syst Evol Microbiol 57: 1653-1658. (Pubitemid 47163024)
    • (2007) International Journal of Systematic and Evolutionary Microbiology , vol.57 , Issue.7 , pp. 1653-1658
    • Lee, K.1    Choo, Y.-J.2    Giovannoni, S.J.3    Cho, J.-C.4
  • 52
    • 34248198910 scopus 로고    scopus 로고
    • Phaeobacter daeponensis sp. Nov., isolated from a tidal flat of the Yellow Sea in Korea
    • Yoon JH, Kang SJ, Lee SY, Oh TK (2007) Phaeobacter daeponensis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 57: 856-861.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 856-861
    • Yoon, J.H.1    Kang, S.J.2    Lee, S.Y.3    Oh, T.K.4
  • 53
    • 67649824107 scopus 로고    scopus 로고
    • Roseovarius pacificus sp. Nov., isolated from deepsea sediment
    • Wang B, Tan T, Shao Z (2009) Roseovarius pacificus sp. nov., isolated from deepsea sediment. Int J Syst Evol Microbiol 59: 1116-1121.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1116-1121
    • Wang, B.1    Tan, T.2    Shao, Z.3
  • 54
    • 0025123273 scopus 로고
    • Janthinocins A, B and C, novel peptide lactone antibiotics produced by Janthinobacterium lividum. I. Taxonomy, fermentation, isolation, physico-chemical and biological characteristics
    • O'Sullivan J, McCullough J, Johnson JH, Bonner DP, Clark JC, et al. (1990) Janthinocins A, B and C, novel peptide lactone antibiotics produced by Janthinobacterium lividum. I. Taxonomy, fermentation, isolation, physico-chemical and biological characterization. J Antibiot (Tokyo) 43: 913-919. (Pubitemid 20274051)
    • (1990) Journal of Antibiotics , vol.43 , Issue.8 , pp. 913-919
    • O'Sullivan, J.1    McCullough, J.2    Johnson, J.H.3    Bonner, D.P.4    Clark, J.C.5    Dean, L.6    Trejo, W.H.7
  • 57
    • 78649282034 scopus 로고    scopus 로고
    • Vibrio atypicus sp. Nov., isolated from the digestive tract of the Chinese prawn (Penaeus chinensis O'sbeck)
    • Wang Y, Zhang X-H, Yu M, Wang H, Austin B (2010) Vibrio atypicus sp. nov., isolated from the digestive tract of the Chinese prawn (Penaeus chinensis O'sbeck). Int J Syst Evol Microbiol 60: 2517-2523.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 2517-2523
    • Wang, Y.1    Zhang, X.-H.2    Yu, M.3    Wang, H.4    Austin, B.5
  • 58
    • 0027965478 scopus 로고
    • Numerical taxonomy of Vibrionaceae isolated from oysters and seawater along an annual cycle
    • Ortigosa M, Garay E, Pujalte Ma-Js (1994) Numerical Taxonomy of Vibrionaceae Isolated from Oysters and Seawater Along an Annual Cycle. Syst Appl Microbiol 17: 216-225. (Pubitemid 24285689)
    • (1994) Systematic and Applied Microbiology , vol.17 , Issue.2 , pp. 216-225
    • Ortigosa, M.1    Garay, E.2    Pujalte, M.-J.3
  • 59
    • 85042619897 scopus 로고    scopus 로고
    • Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)
    • Navarrete P, Espejo RT, Romero J (2009) Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.). Microb Ecol 57: 550-561.
    • (2009) Microb Ecol , vol.57 , pp. 550-561
    • Navarrete, P.1    Espejo, R.T.2    Romero, J.3
  • 60
    • 0347724164 scopus 로고    scopus 로고
    • Abundance of potentially pathogenic micro-organisms in Penaeus monodon larvae rearing systems in India
    • DOI 10.1078/0944-5013-00208
    • Vaseeharan B, Ramasamy P (2003) Abundance of potentially pathogenic microorganisms in Penaeus monodon larvae rearing systems in India. Microbiol Res 158: 299-308. (Pubitemid 38078137)
    • (2003) Microbiological Research , vol.158 , Issue.4 , pp. 299-308
    • Vaseeharan, B.1    Ramasamy, P.2
  • 61
    • 84987538975 scopus 로고
    • Vibrio harveyi, an opportunistic pathogen of common snook, Centropomus undecimalis (Bloch), held in captivity
    • Kraxberger-Beatty T, McGarey DJ, Grier HJ, Lim DV (1990) Vibrio harveyi, an opportunistic pathogen of common snook, Centropomus undecimalis (Bloch), held in captivity. J Fish Dis 13: 557-560.
    • (1990) J Fish Dis , vol.13 , pp. 557-560
    • Kraxberger-Beatty, T.1    McGarey, D.J.2    Grier, H.J.3    Lim, D.V.4
  • 62
    • 84861896952 scopus 로고    scopus 로고
    • Fusibacter tunisiensis sp. Nov., isolated from an anaerobic reactor used to treat olive-mill wastewater
    • Ben Hania W, Fraj B, Postec A, Fadhlaoui K, Hamdi M, et al. (2012) Fusibacter tunisiensis sp. nov., isolated from an anaerobic reactor used to treat olive-mill wastewater. Int J Syst Evol Microbiol 62: 1365-1368.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 1365-1368
    • Ben Hania, W.1    Fraj, B.2    Postec, A.3    Fadhlaoui, K.4    Hamdi, M.5
  • 63
    • 0033030032 scopus 로고    scopus 로고
    • Fusibacter paucivorans gen. Nov., sp. Nov., an anaerobic, thiosulfate-reducing bacterium from an oil-producing well
    • Ravot G, Magot M, Fardeau M-L, Patel BKC, Thomas P, et al. (1999) Fusibacter paucivorans gen. nov., sp. nov., an anaerobic, thiosulfate-reducing bacterium from an oil-producing well. Int J Syst Bacteriol 49: 1141-1147.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 1141-1147
    • Ravot, G.1    Magot, M.2    Fardeau, M.-L.3    Patel, B.K.C.4    Thomas, P.5
  • 65
    • 77952564878 scopus 로고    scopus 로고
    • Bacteriocin as Weapons in the Marine Animal-Associated Bacteria Warfare: Inventory and Potential Applications as an Aquaculture Probiotic
    • Desriac F, Defer D, Bourgougnon N, Brillet B, Le Chevalier P, et al. (2010) Bacteriocin as Weapons in the Marine Animal-Associated Bacteria Warfare: Inventory and Potential Applications as an Aquaculture Probiotic. Marine Drugs 8: 1153-1177.
    • (2010) Marine Drugs , vol.8 , pp. 1153-1177
    • Desriac, F.1    Defer, D.2    Bourgougnon, N.3    Brillet, B.4    Le Chevalier, P.5
  • 66
    • 84859219905 scopus 로고    scopus 로고
    • Effect of Lactobacillus plantarum isolated from digestive tract of wild shrimp on growth and survival of white shrimp (Litopenaeus vannamei) challenged with Vibrio harveyi
    • Kongnum K, Hongpattarakere T (2012) Effect of Lactobacillus plantarum isolated from digestive tract of wild shrimp on growth and survival of white shrimp (Litopenaeus vannamei) challenged with Vibrio harveyi. Fish & Shellfish Immunology 32: 170-177.
    • (2012) Fish & Shellfish Immunology , vol.32 , pp. 170-177
    • Kongnum, K.1    Hongpattarakere, T.2
  • 67
    • 79956030046 scopus 로고    scopus 로고
    • The intestinal microbial diversity in Chinese shrimp (Fenneropenaeus chinensis) as determined by PCRDGGE and clone library analyses
    • Liu H, Wang L, Liu M, Wang B, Jiang K, et al. (2011) The intestinal microbial diversity in Chinese shrimp (Fenneropenaeus chinensis) as determined by PCRDGGE and clone library analyses. Aquaculture 317: 32-36.
    • (2011) Aquaculture , vol.317 , pp. 32-36
    • Liu, H.1    Wang, L.2    Liu, M.3    Wang, B.4    Jiang, K.5
  • 68
    • 84868680379 scopus 로고    scopus 로고
    • Gut bacteria associated with different diets in reared Nephrops norvegicus
    • Meziti A, Mente E, Kormas KA (2012) Gut bacteria associated with different diets in reared Nephrops norvegicus. Syst Appl Microbiol 35: 473-482.
    • (2012) Syst Appl Microbiol , vol.35 , pp. 473-482
    • Meziti, A.1    Mente, E.2    Kormas, K.A.3
  • 69
    • 79957714527 scopus 로고    scopus 로고
    • Regulation of innate and adaptive immunity by the commensal microbiota
    • Jarchum I, Pamer EG (2011) Regulation of innate and adaptive immunity by the commensal microbiota. Curr Opin Immunol 23: 353-360.
    • (2011) Curr Opin Immunol , vol.23 , pp. 353-360
    • Jarchum, I.1    Pamer, E.G.2
  • 71
    • 84870266477 scopus 로고    scopus 로고
    • The Evolution of Mutualism in Gut Microbiota Via Host Epithelial Selection
    • Schluter J, Foster KR (2012) The Evolution of Mutualism in Gut Microbiota Via Host Epithelial Selection. PLoS Biol 10: e1001424.
    • (2012) PLoS Biol , vol.10
    • Schluter, J.1    Foster, K.R.2
  • 72
    • 70349985733 scopus 로고    scopus 로고
    • Expression of immune-related genes in the digestive organ of shrimp, Penaeus monodon, after an oral infection by Vibrio harveyi
    • Soonthornchai W, Rungrassamee W, Karoonuthaisiri N, Jarayabhand P, Klinbunga S, et al. (2010) Expression of immune-related genes in the digestive organ of shrimp, Penaeus monodon, after an oral infection by Vibrio harveyi. Dev Comp Immunol 34: 19-28.
    • (2010) Dev Comp Immunol , vol.34 , pp. 19-28
    • Soonthornchai, W.1    Rungrassamee, W.2    Karoonuthaisiri, N.3    Jarayabhand, P.4    Klinbunga, S.5
  • 73
    • 33750500202 scopus 로고    scopus 로고
    • Comparison of fecal biota from specific pathogen free and feral mice
    • DOI 10.1016/j.anaerobe.2006.09.002, PII S1075996406000710
    • Wilson KH, Brown RS, Andersen GL, Tsang J, Sartor B (2006) Comparison of fecal biota from specific pathogen free and feral mice. Anaerobe 12: 249-253. (Pubitemid 44666470)
    • (2006) Anaerobe , vol.12 , Issue.5-6 , pp. 249-253
    • Wilson, K.H.1    Brown, R.S.2    Andersen, G.L.3    Tsang, J.4    Sartor, B.5
  • 74
    • 34147172817 scopus 로고    scopus 로고
    • Native microbial colonization of Drosophila melanogaster and its use as a model of Enterococcus faecalis pathogenesis
    • DOI 10.1128/IAI.01496-06
    • Cox CR, Gilmore MS (2007) Native microbial colonization of Drosophila melanogaster and its use as a model of Enterococcus faecalis pathogenesis. Infect Immun 75: 1565-1576. (Pubitemid 46559420)
    • (2007) Infection and Immunity , vol.75 , Issue.4 , pp. 1565-1576
    • Cox, C.R.1    Gilmore, M.S.2
  • 75
    • 84862770956 scopus 로고    scopus 로고
    • Environmental and ecological factors that shape the gut bacterial communities of fish: A meta-analysis
    • Sullam KE, Essinger SD, Lozupone CA, O'Connor MP, Rosen GL, et al. (2012) Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis. Mol Ecol 21: 3363-3378.
    • (2012) Mol Ecol , vol.21 , pp. 3363-3378
    • Sullam, K.E.1    Essinger, S.D.2    Lozupone, C.A.3    O'Connor, M.P.4    Rosen, G.L.5
  • 76
    • 47749155640 scopus 로고    scopus 로고
    • Microbial community analysis of water, foregut, and hindgut during growth of pacific white shrimp, Litopenaeus vannamei, in closed-system aquaculture
    • DOI 10.1111/j.1749-7345.2008.00155.x
    • Johnson CN, Barnes S, Ogle J, Grimes DJ, Chang Y-J, et al. (2008) Microbial Community Analysis of Water, Foregut, and Hindgut during Growth of Pacific White Shrimp, Litopenaeus vannamei, in Closed-System Aquaculture. J World Aquacult Soc 39: 251-258. (Pubitemid 352024616)
    • (2008) Journal of the World Aquaculture Society , vol.39 , Issue.2 , pp. 251-258
    • Johnson, C.N.1    Barnes, S.2    Ogle, J.3    Grimes, D.J.4    Chang, Y.-J.5    Peacock, A.D.6    Kline, L.7
  • 78
    • 0035153070 scopus 로고    scopus 로고
    • Pyrosequencing Sheds Light on DNA Sequencing
    • Ronaghi M (2001) Pyrosequencing Sheds Light on DNA Sequencing. Genome Research 11: 3-11.
    • (2001) Genome Research , vol.11 , pp. 3-11
    • Ronaghi, M.1
  • 79
    • 84872323101 scopus 로고    scopus 로고
    • Biased Diversity Metrics Revealed by Bacterial 16S Pyrotags Derived from Different Primer Sets
    • Cai L, Ye L, Tong AHY, Lok S, Zhang T (2013) Biased Diversity Metrics Revealed by Bacterial 16S Pyrotags Derived from Different Primer Sets. PLoS One 8.
    • (2013) PLoS One , pp. 8
    • Cai, L.1    Ye, L.2    Tong, A.H.Y.3    Lok, S.4    Zhang, T.5
  • 80
    • 84892488033 scopus 로고    scopus 로고
    • The Effect of Primer Choice and Short Read Sequences on the Outcome of 16S rRNA Gene Based Diversity Studies
    • Ghyselinck J, Pfeiffer S, Heylen K, Sessitsch A, De Vos P (2013) The Effect of Primer Choice and Short Read Sequences on the Outcome of 16S rRNA Gene Based Diversity Studies. PLoS ONE 8: e71360.
    • (2013) PLoS ONE , vol.8
    • Ghyselinck, J.1    Pfeiffer, S.2    Heylen, K.3    Sessitsch, A.4    De Vos, P.5
  • 81
    • 84855706676 scopus 로고    scopus 로고
    • Assessment of variation in bacterial composition among microhabitats in a mangrove environment using DGGE fingerprints and barcoded pyrosequencing
    • Cleary DF, Smalla K, Mendonca-Hagler LC, Gomes NC (2012) Assessment of variation in bacterial composition among microhabitats in a mangrove environment using DGGE fingerprints and barcoded pyrosequencing. PLoS ONE 7: e29380.
    • (2012) PLoS ONE , vol.7
    • Cleary, D.F.1    Smalla, K.2    Mendonca-Hagler, L.C.3    Gomes, N.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.