메뉴 건너뛰기




Volumn 78, Issue 7, 2012, Pages 2359-2366

Ecological succession of bacterial communities during conventionalization of Germ-Free mice

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA GENE; AMPLICONS; BACTERIAL COMMUNITY; BACTEROIDES; C57BL/6 MICE; GASTROINTESTINAL TRACT; GERM-FREE MICE; PYROSEQUENCING; REASSEMBLY; STRUCTURAL HETEROGENEITY;

EID: 84861139714     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.05239-11     Document Type: Article
Times cited : (58)

References (33)
  • 1
    • 8144226856 scopus 로고    scopus 로고
    • The gut microbiota as an environmental factor that regulates fat storage
    • Bäckhed F, et al. 2004. The gut microbiota as an environmental factor that regulates fat storage. Proc. Natl. Acad. Sci. U. S. A. 101:15718 -15723.
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 15718-15723
    • Bäckhed, F.1
  • 3
    • 77950202391 scopus 로고    scopus 로고
    • Stressor exposure disrupts commensal microbial populations in the intestines and leads to increased colonization by Citrobacter rodentium
    • Bailey MT, et al. 2010. Stressor exposure disrupts commensal microbial populations in the intestines and leads to increased colonization by Citrobacter rodentium. Infect. Immun. 78:1509 -1519.
    • (2010) Infect. Immun. , vol.78 , pp. 1509-1519
    • Bailey, M.T.1
  • 4
    • 0021228694 scopus 로고
    • The intestinal microflora of infants: composition of fecal flora in breast-fed and bottle-fed infants
    • Benno Y, Sawada K, Mitsuoka T. 1984. The intestinal microflora of infants: composition of fecal flora in breast-fed and bottle-fed infants. Microbiol. Immunol. 28:975-986.
    • (1984) Microbiol. Immunol. , vol.28 , pp. 975-986
    • Benno, Y.1    Sawada, K.2    Mitsuoka, T.3
  • 5
    • 84861165134 scopus 로고    scopus 로고
    • Mucosal interactions and gastrointestinal microbiota
    • Ouwehand AC, Vaughan EE (ed). Taylor and Francis Group, New York, NY
    • Chow WL, Lee Y. 2006. Mucosal interactions and gastrointestinal microbiota, p 123-136. In Ouwehand AC, Vaughan EE (ed), Gastrointestinal microbiology. Taylor and Francis Group, New York, NY.
    • (2006) Gastrointestinal microbiology , pp. 123-136
    • Chow, W.L.1    Lee, Y.2
  • 6
    • 79956075540 scopus 로고    scopus 로고
    • Colonization-induced host-gut microbial metabolic interaction
    • Claus SP, et al. 2011. Colonization-induced host-gut microbial metabolic interaction. mBio 2:e00271-10.
    • (2011) mBio , vol.2
    • Claus, S.P.1
  • 7
    • 0032913517 scopus 로고    scopus 로고
    • Probiotics, prebiotics, and synbiotics: approaches for modulating the microbial ecology of the gut
    • Collins MD, Gibson GR.1999. Probiotics, prebiotics, and synbiotics: approaches for modulating the microbial ecology of the gut. Am. J. Clin. Nutr. 69:1052S-1057S.
    • (1999) Am. J. Clin. Nutr. , vol.69
    • Collins, M.D.1    Gibson, G.R.2
  • 8
    • 77955386857 scopus 로고    scopus 로고
    • Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
    • Dominguez-Bello MG, et al. 2010. Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc. Natl. Acad. Sci. U. S. A. 107:11971-11975.
    • (2010) Proc. Natl. Acad. Sci. U. S. A. , vol.107 , pp. 11971-11975
    • Dominguez-Bello, M.G.1
  • 9
    • 49549107771 scopus 로고    scopus 로고
    • Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)
    • Dowd SE, et al. 2008. Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP). BMC Microbiol. 8:125.
    • (2008) BMC Microbiol , vol.8 , pp. 125
    • Dowd, S.E.1
  • 11
    • 0032974177 scopus 로고    scopus 로고
    • Fecal microflora in healthy infants born by different methods of delivery: permanent changes in intestinal flora after cesarean delivery
    • Grönlund MM, Lehtonen OP, Eerola E, Kero P. 1999. Fecal microflora in healthy infants born by different methods of delivery: permanent changes in intestinal flora after cesarean delivery. J. Pediatr. Gastroenterol. Nutr. 28:19 -25.
    • (1999) J. Pediatr. Gastroenterol. Nutr. , vol.28 , pp. 19-25
    • Grönlund, M.M.1    Lehtonen, O.P.2    Eerola, E.3    Kero, P.4
  • 12
    • 84861144259 scopus 로고    scopus 로고
    • The intestinal microbiota of the elderly
    • Ouwehand AC, Vaughan EE (ed), Taylor and Francis Group, New York
    • He F. 2006. The intestinal microbiota of the elderly, p 75-91. In Ouwehand AC, Vaughan EE (ed), Gastrointestinal microbiology. Taylor and Francis Group, New York, NY.
    • (2006) NY Gastrointestinal microbiology , pp. 75-91
    • He, F.1
  • 13
    • 0034952363 scopus 로고    scopus 로고
    • Escherichia coli strains colonising the gastrointestinal tract protect germfree mice against Salmonella typhimurium infection
    • Hudault S, Guignot J, Servin AL. 2001. Escherichia coli strains colonising the gastrointestinal tract protect germfree mice against Salmonella typhimurium infection. Gut 49:47-55.
    • (2001) Gut , vol.49 , pp. 47-55
    • Hudault, S.1    Guignot, J.2    Servin, A.L.3
  • 14
    • 79952763661 scopus 로고    scopus 로고
    • Succession of microbial consortia in the developing infant gut microbiome
    • Koenig JE, et al. 2011. Succession of microbial consortia in the developing infant gut microbiome. Proc. Natl. Acad. Sci. U. S. A. 108:4578-4585.
    • (2011) Proc. Natl. Acad. Sci. U. S. A. , vol.108 , pp. 4578-4585
    • Koenig, J.E.1
  • 15
    • 77954755690 scopus 로고    scopus 로고
    • Adaptation in a mouse colony monoassociated with Escherichia coli K-12 for more than 1,000 days
    • Lee SM, et al. 2010. Adaptation in a mouse colony monoassociated with Escherichia coli K-12 for more than 1,000 days. Appl. Environ. Microbiol. 76:4655-4663.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 4655-4663
    • Lee, S.M.1
  • 16
    • 23344442120 scopus 로고    scopus 로고
    • Obesity alters gut microbial ecology
    • Ley RE, et al. 2005. Obesity alters gut microbial ecology. Proc. Natl. Acad. Sci. U. S. A. 102:11070 -11075.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 11070-11075
    • Ley, R.E.1
  • 17
    • 54549106898 scopus 로고    scopus 로고
    • Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
    • Liu ZZ, DeSantis TZ, Andersen GL, Knight R. 2008. Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers. Nucleic Acids Res. 36:e120.
    • (2008) Nucleic Acids Res , vol.36
    • Liu, Z.Z.1    DeSantis, T.Z.2    Andersen, G.L.3    Knight, R.4
  • 18
    • 0030031911 scopus 로고    scopus 로고
    • Transmission of mother's microflora to the newborn at birth
    • Mändar R, Mikelsaar M. 1996. Transmission of mother's microflora to the newborn at birth. Biol. Neonate 69:30 -35.
    • (1996) Biol. Neonate , vol.69 , pp. 30-35
    • Mändar, R.1    Mikelsaar, M.2
  • 19
    • 0035139746 scopus 로고    scopus 로고
    • The gastrointestinal ecosystem: a precarious alliance among epithelium, immunity and microbiota
    • McCracken VJ, Lorenz RG. 2001. The gastrointestinal ecosystem: a precarious alliance among epithelium, immunity and microbiota. Cell. Microbiol. 3:1-11.
    • (2001) Cell. Microbiol. , vol.3 , pp. 1-11
    • McCracken, V.J.1    Lorenz, R.G.2
  • 21
    • 0028832576 scopus 로고
    • Physiological state of Escherichia coli BJ4 growing in the large intestines of streptomycin-treated mice
    • Poulsen LK, Licht TR, Rang C, Krogfelt KA, Molin S. 1995. Physiological state of Escherichia coli BJ4 growing in the large intestines of streptomycin-treated mice. J. Bacteriol. 177:5840 -5845.
    • (1995) J. Bacteriol. , vol.177 , pp. 5840-5845
    • Poulsen, L.K.1    Licht, T.R.2    Rang, C.3    Krogfelt, K.A.4    Molin, S.5
  • 22
    • 0035136311 scopus 로고    scopus 로고
    • Chemostat modeling of Escherichia coli persistence in conventionalized mono-associated and streptomycin-treated mice
    • Rang C, Midtvedt T, Molin S, Chao L. 2001. Chemostat modeling of Escherichia coli persistence in conventionalized mono-associated and streptomycin-treated mice. Can. J. Microbiol. 47:86 -90.
    • (2001) Can. J. Microbiol. , vol.47 , pp. 86-90
    • Rang, C.1    Midtvedt, T.2    Molin, S.3    Chao, L.4
  • 23
    • 0032955085 scopus 로고    scopus 로고
    • Estimation of growth rates of Escherichia coli BJ4 in streptomycin-treated and previously germfree mice by in situ rRNA hybridization
    • Rang CU, et al. 1999. Estimation of growth rates of Escherichia coli BJ4 in streptomycin-treated and previously germfree mice by in situ rRNA hybridization. Clin. Diagn. Lab. Immunol. 6:434-436.
    • (1999) Clin. Diagn. Lab. Immunol. , vol.6 , pp. 434-436
    • Rang, C.U.1
  • 24
    • 33749997498 scopus 로고    scopus 로고
    • Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
    • Rawls JF, Mahowald MA, Ley RE, Gordon JI. 2006. Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 127:423- 433.
    • (2006) Cell , vol.127 , pp. 423-433
    • Rawls, J.F.1    Mahowald, M.A.2    Ley, R.E.3    Gordon, J.I.4
  • 26
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: open-source, platformindependent, community-supported software for describing and comparing microbial communities
    • Schloss PD, et al. 2009. Introducing mothur: open-source, platformindependent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75:7537-7541.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 7537-7541
    • Schloss, P.D.1
  • 27
    • 44949231424 scopus 로고    scopus 로고
    • Analyzing real-time PCR data by the comparative C-T method
    • Schmittgen TD, Livak KJ. 2008. Analyzing real-time PCR data by the comparative C-T method. Nat. Protoc. 3:1101-1108.
    • (2008) Nat. Protoc. , vol.3 , pp. 1101-1108
    • Schmittgen, T.D.1    Livak, K.J.2
  • 28
    • 0020052321 scopus 로고
    • The microbial ecology of the large bowel of breastfed and formula-fed infants during the first year of life
    • Stark PL, Lee A. 1982. The microbial ecology of the large bowel of breastfed and formula-fed infants during the first year of life. J. Med. Microbiol. 15:189 -203.
    • (1982) J. Med. Microbiol. , vol.15 , pp. 189-203
    • Stark, P.L.1    Lee, A.2
  • 29
    • 9644267200 scopus 로고    scopus 로고
    • Impact of consumption of oligosaccharidecontaining biscuits on the fecal microbiota of humans
    • Tannock GW, et al. 2004. Impact of consumption of oligosaccharidecontaining biscuits on the fecal microbiota of humans. Appl. Environ. Microbiol. 70:2129 -2136.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 2129-2136
    • Tannock, G.W.1
  • 30
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • Turnbaugh PJ, et al. 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027-1031.
    • (2006) Nature , vol.444 , pp. 1027-1031
    • Turnbaugh, P.J.1
  • 31
    • 77950669604 scopus 로고    scopus 로고
    • The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice
    • Turnbaugh PJ, et al. 2009. The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci. Transl. Med. 1:6ra14.
    • (2009) Sci. Transl. Med. , vol.1 , Issue.6
    • Turnbaugh, P.J.1
  • 32
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang Q, Garrity GM, Tiedje JM, Cole JR. 2007. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73:5261-5267.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.