An in-advance stable isotope labeling strategy for relative analysis of multiple acidic plant hormones in sub-milligram Arabidopsis thaliana seedling and a single seed

Journal of Chromatography A

Volumn 1338, Issue , 2014, Pages 67-76

  Sun, Xiaohong ^a   Ouyang, Yue ^a,b   Chu, Jinfang ^a   Yan, Jing ^b   Yu, Yan ^c   Li, Xiaoqiang ^c   Yang, Jun ^c   Yan, Cunyu ^a  

^a INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

^b HEILONGJIANG UNIVERSITY OF CHINESE MEDICINE   (China)

^c SHANGHAI INSTITUTE OF ORGANIC CHEMISTRY   (China)

Author keywords

Arabidopsis thaliana; LC MS MS; Plant hormones; Relative quantification; Stable isotope labeling

Indexed keywords

EXTRACTION; HORMONES; ISOTOPES;

ARABIDOPSIS THALIANA; LC-MS/MS; PLANT HORMONE; RELATIVE QUANTIFICATION; STABLE-ISOTOPE LABELING;

SEED;

7 ISO JASMONOYL ISOLEUCINE; ABSCISIC ACID; BROMIDE; BROMOCHOLINE BROMIDE; GIBBERELLIC ACID; INDOLE 3 BURYTIC ACID; INDOLEACETIC ACID; INDOLEPROPIONIC ACID; PHYTOHORMONE; PLANT EXTRACT; SALICYLIC ACID; UNCLASSIFIED DRUG;

ARABIDOPSIS THALIANA; ARTICLE; CALCULATION; CALIBRATION; CONTROLLED STUDY; DRY WEIGHT; ELECTROSPRAY; GERMINATION; ISOTOPE LABELING; LIMIT OF DETECTION; LIMIT OF QUANTITATION; NONHUMAN; PRIORITY JOURNAL; SEED DORMANCY; SEEDLING; SOLID PHASE EXTRACTION; TANDEM MASS SPECTROMETRY; ULTRA PERFORMANCE LIQUID CHROMATOGRAPHY;

ARABIDOPSIS THALIANA;

ARABIDOPSIS THALIANA; LC-MS/MS; PLANT HORMONES; RELATIVE QUANTIFICATION; STABLE ISOTOPE LABELING;

ARABIDOPSIS; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; ISOTOPE LABELING; PLANT GROWTH REGULATORS; REPRODUCIBILITY OF RESULTS; SEEDLING; SEEDS; SOLID PHASE EXTRACTION; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TANDEM MASS SPECTROMETRY;

EID: 84897034793     PISSN: 00219673     EISSN: 18733778     Source Type: Journal    
DOI: 10.1016/j.chroma.2014.02.056     Document Type: Article

References (50)

1. Santner A., Calderon-Villalobos L.I., Estelle M. Nat. Chem. Biol. 2009, 5:301.
2. P.J. Davies, in: Plant Hormones: Physiology, Biochemistry and Molecular Biology, Kluwer Academic, Dordrecht, 1st ed., 1995.
3. Vert G., Nemhauser J.L., Geldner N., Hong F., Chory J. Annu. Rev. Cell Dev. Biol. 2005, 21:177.
4. Browse J. Vitam. Horm. 2005, 72:431.
5. Loake G., Grant M. Curr. Opin. Plant. Biol. 2007, 10:466.
6. Grun S., Lindermayr C., Sell S., Durner J. J. Exp. Bot. 2006, 57:507.
7. Gomez-Roldan V., Fermas S., Brewer P.B., Puech-Pages V., Dun E.A., Pillot J.P., Letisse F., Matusova R., Danoun S., Portais J.C., Bouwmeester H., Becard G., Beveridge C.A., Rameau C., Rochange S.F. Nature 2008, 455:189.
8. Umehara M., Hanada A., Yoshida S., Akiyama K., Arite T., Takeda-Kamiya N., Magome H., Kamiya Y., Shirasu K., Yoneyama K., Kyozuka J., Yamaguchi S. Nature 2008, 455:195.
9. Jun J.H., Fiume E., Fletcher J.C. Cell Mol. Life Sci. 2008, 65:743.
10. Schmelz E.A., Engelberth J., Alborn H.T., O'Donnell P., Sammons M., Toshima H., Tumlinson J.H. Proc. Natl. Acad. Sci. U.S.A. 2003, 100:10552.
11. Izumi Y., Okazawa A., Bamba T., Kobayashi A., Fukusaki E. Anal. Chim. Acta 2009, 648:215.
12. M. Seo, Y. Jikumaru, Y. Kamiya, in: A.R. Kermode (Ed.), Methods in Molecular Biology, Springer, New York, 2011, p. 99.
13. Izumi Y., Kajiyama S., Nakamura R., Ishihara A., Okazawa A., Fukusaki E., Kanematsu Y., Kobayashi A. Planta 2009, 229:931.
14. Kanno Y., Jikumaru Y., Hanada A., Nambara E., Abrams S.R., Kamiya Y., Seo M. Plant. Cell Physiol. 2010, 51:1988.
15. Depuydt S., Hardtke C.S. Curr. Biol. 2011, 21:R365.
16. Thaler J.S., Humphrey P.T., Whiteman N.K. Trends Plant Sci. 2012, 17:260.
17. Gallego-Bartolomé J., Minguet E.G., Grau-Enguix F., Abbas M., Locascio A., Thomas S.G., Alabadí D., Blázquez M.A. Proc. Natl. Acad. Sci. U.S.A. 2012, 109:13446.
18. Hou S., Zhu J., Ding M., Lv G. Talanta 2008, 76:798.
19. Kojima M., Kamada-Nobusada T., Komatsu H., Takei K., Kuroha T., Mizutani M., Ashikari M., Ueguchi-Tanaka M., Matsuoka M., Suzuki K., Sakakibara H. Plant Cell Physiol. 2009, 50:1201.
20. Pan X., Welti R., Wang X. Nat. Protoc. 2010, 5:986.
21. O. Novák, E. Hényková, I. Sairanen, M. Kowalczyk, T. Pospíšil, K. Ljung, Plant J. 72 (2012) 523.
22. Chen M.L., Fu X.M., Liu J.Q., Ye T.T., Hou S.Y., Huang Y.Q., Yuan B.F., Wu Y., Feng Y.Q. J. Chromatogr. B 2012, 905:67.
23. Ong S.E., Blagoev B., Kratchmarova I., Kristensen D.B., Steen H., Pandey A., Mann M. Mol. Cell Proteomics 2002, 1:376.
24. Rinschen M.M., Yu M.J., Wang G.H., Boja E.S., Hoffert J.D., Pisitkun T., Knepper M.A. Proc. Natl. Acad. Sci. U.S.A. 2010, 107:3882.
25. Guo G., Li N. Phytochemistry 2011, 72:1028.
26. Gygi S.P., Rist B., Gerber S.A., Turecek F., Gelb M.H., Aebersold R. Nat. Biotechnol. 1999, 17:994.
27. Thompson A., Schafer J., Kuhn K., Kienle S., Schwarz J., Schmidt G., Neumann T., Johnstone R., Mohammed A.K., Hamon C. Anal. Chem. 2003, 75:1895.
28. Bao Y., Hu G.J., Flagel L.E., Salmon A., Bezanilla M., Paterson A.H., Wang Z.N., Wendel J.F. Proc. Natl. Acad. Sci. U.S.A. 2011, 108:21152.
29. Guo K., Li L. Anal. Chem. 2009, 81:3919.
30. Guo K., Li L. Anal. Chem. 2010, 82:8789.
31. Zhang R.J., Regnier F.E. J. Proteome Res. 2002, 1:139.
32. Hansen K.C., Schmitt-Ulms G., Chalkley R.J., Hirsch J., Baldwin M.A., Burlingame A.L. Mol. Cell Proteomics 2003, 2:299.
33. C. Hamon, J. Schwarz, W. Becker, S. Kienle, K. Kuhn, J. Schafer, WO 2007/012849 A3, Patent, 2007.
34. Zhang R.J., Sioma C.S., Thompson R.A., Xiong L., Regnier F.E. Anal. Chem. 2002, 74:3662.
35. Huang Y.Q., Liu J.Q., Gong H., Yang J., Li Y., Feng Y.Q. Analyst 2011, 136:1515.
36. Sun J., Xu Y., Ye S., Jiang H., Chen Q., Liu F., Zhou W., Chen R., Li X., Tietz O., Wu X., Cohen J.D., Palme K., Li C. Plant Cell 2009, 21:1495.
37. Preston J., Tatematsu K., Kanno Y., Hobo T., Kimura M., Jikumaru Y., Yano R., Kamiya Y., Nambara E. Plant Cell Physiol. 2009, 50:1786.
38. Caban M., Migowska N., Stepnowski P., Kwiatkowski M., Kumirska J. J. Chromatogr. A 2012, 1258:117.
39. Hebeler R., Oeljeklaus S., Reidegeld K.A., Eisenacher M., Stephan C., Sitek B., Stuhler K., Meyer H.E., Sturre M.J., Dijkwel P.P., Warscheid B. Mol. Cell Proteomics 2008, 7:108.
40. Taylor J. An Introduction to Error Analysis: The Study of Uncertainties in Physical Measurements 1997, University Science Books, New York.
41. Keller B.O., Suj J., Young A.B., Whittal R.M. Anal. Chim. Acta 2008, 627:71.
42. Zhang S.J., You J.M., Ning S.J., Song C.U., Suo Y.R. J. Chromatogr. A 2013, 1280:84.
43. E.L. Huttlin, A.D. Hegeman, M.R. Sussman, in: J.P. Whitelegge (Ed.), Protein Mass Spectrometry, Elsevier, Amsterdam, 2008.
44. Fukaki H., Tasaka M. Plant Mol. Biol. 2009, 69:437.
45. Barkawi L.S., Tam Y.Y., Tillman J.A., Pederson B., Calio J., Al-Amier H., Emerick M., Normanly J., Cohen J.D. Anal. Biochem. 2008, 372:177.
46. Barkawi L.S., Tam Y.Y., Tillman J.A., Normanly J., Cohen J.D. Nat. Protoc. 2010, 5:1609.
47. Liu X., Hegeman A.D., Gardner G., Cohen J.D. Plant Methods 2012, 8:31.
48. Ludwig-Müller J. Plant Growth Regul. 2000, 32:219.
49. Finkelstein R., Reeves W., Ariizumi T., Steber C. Annu. Rev. Plant Biol. 2008, 59:387.
50. Seo M., Nambara E., Choi G., Yamaguchi S. Plant Mol. Biol. 2009, 69:463.