Comprehensive hormone profiling in developing arabidopsis seeds: Examination of the site of ABA biosynthesis, ABA transport and hormone interactions

Plant and Cell Physiology

Volumn 51, Issue 12, 2010, Pages 1988-2001

  Kanno, Yuri ^a   Jikumaru, Yusuke ^a   Hanada, Atsushi ^a   Nambara, Eiji ^a,c   Abrams, Suzanne R ^b   Kamiya, Yuji ^a   Seo, Mitsunori ^a  

^a RIKEN Center for Sustainable Resource Science   (Japan)

^b NATIONAL RESEARCH COUNCIL CANADA   (Canada)

^c UNIVERSITY OF TORONTO   (Canada)

Author keywords

Abscisic acid (ABA); Dormancy; Hormone interaction; Liquid chromatography electrospray ionizationtandem mass spectrometry (LC ESI MS MS); Seed development; Seed maturation

Indexed keywords

ABSCISIC ACID; PHYTOHORMONE; SALICYLIC ACID;

ARABIDOPSIS; ARTICLE; BIOSYNTHESIS; GENE EXPRESSION REGULATION; GENETICS; GERMINATION; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION; PLANT SEED; PRENATAL DEVELOPMENT; SEED DORMANCY; TIME; TRANSPORT AT THE CELLULAR LEVEL;

ABSCISIC ACID; ARABIDOPSIS; BIOLOGICAL TRANSPORT; GENE EXPRESSION REGULATION, PLANT; GERMINATION; MUTATION; PLANT GROWTH REGULATORS; SALICYLIC ACID; SEED DORMANCY; SEEDS; TIME FACTORS;

ARABIDOPSIS;

EID: 78651310442     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcq158     Document Type: Article

References (53)

1. Abrams, S. R., Nelson, K. and Ambrose, S. J. (2003) Deuterated abscisic acid analogs for mass spectrometry and metabolism studies. J. Label. Cmpd. Radiopharm. 46:273-283.
2. Beaudoin, N., Serizet, C., Gosti, F. and Giraudat, J. (2000) Interactions between abscisic acid and ethylene signaling cascades. Plant Cell 12:1103-1115.
3. Berger, S., Bell, E. and Mullet, J. E. (1996) Two methyl jasmonateinsensitive mutants show altered expression of AtVsp in response to methyl jasmonate and wounding. Plant Physiol. 111:525-531.
4. Bewley, J. D. (1997) Seed germination and dormancy. Plant Cell 9:1055-1066.
5. Chiwocha, S. D., Abrams, S. R., Ambrose, S. J., Cutler, A. J., Loewen, M., Ross, A. R., et al. (2003) A method for profiling classes of plant hormones and their metabolites using liquid chromatographyelectrospray ionization tandem mass spectrometry: an analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds. Plant J. 35:405-417.
6. Chiwocha, S. D., Cutler, A. J., Abrams, S. R., Ambrose, S. J., Yang, J., Ross, A. R., et al. (2005) The etr1-2 mutation in Arabidopsis thaliana affects the abscisic acid, auxin, cytokinin and gibberellin metabolic pathways during maintenance of seed dormancy, moist-chilling and germination. Plant J. 42:35-48.
7. Creelman, R. A. and Mullet, J. E. (1997) Biosynthesis and action of jasmonates in plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 48:355-381.
8. Curaba, J., Moritz, T., Blervaque, R., Parcy, F., Raz, V., Herzog, M., et al. (2004) AtGA3ox2, a key gene responsible for bioactive gibberellin biosynthesis, is regulated during embryogenesis by LEAFY COTYLEDON2 and FUSCA3 in Arabidopsis. Plant Physiol. 136:3660-3669.
9. de Torres-Zabala, M., Truman, W., Bennett, M. H., Lafforgue, G., Mansfield, J. W., Egea, P. R., et al. (2007) Pseudomonas syringae pv. tomato hijacks the Arabidopsis abscisic acid signalling pathway to cause disease. EMBO J. 26:1434-1443.
10. Finkelstein, R. R. (2004) The role of hormones during seed development and germination. In Plant Hormones: Biosynthesis, Signal Transduction, Action! Edited by Davies, P. J. pp. 513-537. Kluwer Academic Publishers, Dordrecht, The Netherlands.
11. Finkelstein, R. R., Gampala, S. S. and Rock, C. D. (2002) Abscisic acid signaling in seeds and seedlings. Plant Cell 14 Suppl: S15-S45.
12. Finkelstein, R., Reeves, W., Ariizumi, T. and Steber, C. (2008) Molecular aspects of seed dormancy. Annu. Rev. Plant Biol. 59:387-415.
13. Frey, A., Godin, B., Bonnet, M., Sotta, B. and Marion-Poll, A. (2004) Maternal synthesis of abscisic acid controls seed development and yield in Nicotiana plumbaginifolia. Planta 218:958-964.
14. Gazzarrini, S., Tsuchiya, Y., Lumba, S., Okamoto, M. and McCourt, P. (2004) The transcription factor FUSCA3 controls developmental timing in Arabidopsis through the hormones gibberellin and abscisic acid. Dev. Cell 7:373-385.
15. Ghassemian, M., Nambara, E., Cutler, S., Kawaide, H., Kamiya, Y. and McCourt, P. (2000) Regulation of abscisic acid signaling by the ethylene response pathway in Arabidopsis. Plant Cell 12:1117-1126.
16. Gutierrez, L., Van Wuytswinkel, O., Castelain, M. and Bellini, C. (2007) Combined networks regulating seed maturation. Trends Plant Sci. 12:294-300.
17. Hu, J. H., Mitchum, M. G., Barnaby, N., Ayele, B. T., Ogawa, M., Nam, E., et al. (2008) Potential sites of bioactive gibberellin production during reproductive growth in Arabidopsis. Plant Cell 20:320-336.
18. Ishiguro, S., Kawai-Oda, A., Ueda, J., Nishida, I. and Okada, K. (2001) The DEFECTIVE IN ANTHER DEHISCIENCE gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis. Plant Cell 13:2191-2209.
19. Jadhav, A. S., Taylor, D. C., Giblin, M., Ferrie, A. M., Ambrose, S. J., Ross, A. R., et al. (2008) Hormonal regulation of oil accumulation in Brassica seeds: metabolism and biological activity of ABA, 7′-, 8′- and 9′-hydroxy ABA in microspore derived embryos of B. napus. Phytochemistry 69:2678-2688.
20. Karssen, C. M., Brinkhorst-van der Swan, D. L. C., Breekland, A. E. and Koornneef, M. (1983) Induction of dormancy during seed development by endogenous abscisic acid: studies on abscisic acid deficient genotypes of Arabidopsis thaliana (L.) Heynh. Planta 157:158-165.
21. Kojima, M., Kamada-Nobusada, T., Komatsu, H., Takei, K., Kuroha, T., Mizutani, M., et al. (2009) Highly sensitive and high-throughput analysis of plant hormones using MS-probe modification and liquid chromatography-tandem mass spectrometry: an application for hormone profiling in Oryza sativa. Plant Cell Physiol. 50:1201-1214.
22. Koornneef, M., Hanhart, C. J., Hilhorst, H. W. M. and Karssen, C. M. (1989) In vivo inhibition of seed development and reserve protein accumulation in recombinants of abscisic-acid biosynthesis and responsiveness mutants in Arabidopsis thaliana. Plant Physiol. 90:463-469.
23. Koornneef, M., Jorna, M. L., Brinkhorst-van der Swan, D. L. C. and Karssen, C. M. (1982) The isolation of abscisic acid (ABA) deficient mutants by selection of induced revertants in non-germinating gibberellin sensitive lines of Arabidopsis thaliana (L.) Heynh. Theor. Appl. Genet. 61:385-393.
24. Kushiro, T., Okamoto, M., Nakabayashi, K., Yamagishi, K., Kitamura, S., Asami, T., et al. (2004) The Arabidopsis cytochrome P450 CYP707A encodes ABA 8′-hydroxylases: key enzymes in ABA catabolism. EMBO J. 23:1647-1656.
25. Lefebvre, V., North, H., Frey, A., Sotta, B., Seo, M., Okamoto, M., et al. (2006) Functional analysis of Arabidopsis NCED6 and NCED9 genes indicates that ABA synthesized in the endosperm is involved in the induction of seed dormancy. Plant J. 45:309-319.
26. Liu, P. P., Montgomery, T. A., Fahlgren, N., Kasschau, K. D., Nonogaki, H. and Carrington, J. C. (2007) Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages. Plant J. 52:133-146.
27. McCarty, D. R. (1995) Genetic control and integration of maturation and germination pathways in seed development. Annu. Rev. Plant Physiol. Plant Mol. Biol. 46:71-93.
28. Meinke, D. W. (1995) Molecular-genetics of plant embryogenesis. Annu. Rev. Plant Physiol. 46:369-394.
29. Meinke, D. W., Franzmann, L. H., Nickle, T. C. and Yeung, E. C. (1994) Leafy cotyledon mutants of Arabidopsis. Plant Cell 6:1049-1064.
30. Meurs, C., Basra, A. S., Karssen, C. M. and Vanloon, L. C. (1992) Role of abscisic-acid in the induction of desiccation tolerance in developing seeds of Arabidopsis thaliana. Plant Physiol. 98:1484-1493.
31. Moller, B. and Weijers, D. (2009) Auxin control of embryo patterning. Cold Spring Harb. Perspect. Biol. 1: a001545.
32. Nambara, E., Hayama, R., Tsuchiya, Y., Nishimura, M., Kawaide, H., Kamiya, Y., et al. (2000) The role of ABI3 and FUS3 loci in Arabidopsis thaliana on phase transition from late embryo development to germination. Dev. Biol. 220:412-423.
33. Nambara, E., Kawaide, H., Kamiya, Y. and Naito, S. (1998) Characterization of an Arabidopsis thaliana mutant that has a defect in ABA accumulation: ABA-dependent and ABA-independent accumulation of free amino acids during dehydration. Plant Cell Physiol. 39:853-858.
34. Nambara, E. and Marion-Poll, A. (2005) Abscisic acid biosynthesis and catabolism. Annu. Rev. Plant Biol. 56:165-185.
35. Okamoto, M., Kuwahara, A., Seo, M., Kushiro, T., Asami, T., Hirai, N., et al. (2006) CYP707A1 and CYP707A2, which encode abscisic acid 8′-hydroxylases, are indispensable for proper control of seed dormancy and germination in Arabidopsis. Plant Physiol. 141:97-107.
36. Parcy, F., Valon, C., Kohara, A., Misera, S. and Giraudat, J. (1997) The ABSCISIC ACID-INSENSITIVE3, FUSCA3, and LEAFY COTYLEDON1 loci act in concert to control multiple aspects of Arabidopsis seed development. Plant Cell 9:1265-1277.
37. Parcy, F., Valon, C., Raynal, M., Gaubiercomella, P., Delseny, M. and Giraudat, J. (1994) Regulation of gene expression programs during Arabidopsis seed development: roles of the ABI3 locus and of endogenous abscisic acid. Plant Cell 6:1567-1582.
38. Preston, J., Tatematsu, K., Kanno, Y., Hobo, T., Kimura, M., Jikumaru, Y., et al. (2009) Temporal expression patterns of hormone metabolism genes during imbibition of Arabidopsis thaliana seeds: a comparative study on dormant and non-dormant accessions. Plant Cell Physiol. 50:1786-1800.
39. Raz, V., Bergervoet, J. H. and Koornneef, M. (2001) Sequential steps for developmental arrest in Arabidopsis seeds. Development 128:243-252.
40. Riefler, M., Novak, O., Strnad, M. and Schmulling, T. (2006) Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism. Plant Cell 18:40-54.
41. Saika, H., Okamoto, M., Miyoshi, K., Kushiro, T., Shinoda, S., Jikumaru, Y., et al. (2007) Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8′-hydroxylase in rice. Plant Cell Physiol. 48:287-298.
42. Saito, S., Hirai, N., Matsumoto, C., Ohigashi, H., Ohta, D., Sakata, K., et al. (2004) Arabidopsis CYP707As encode (+)-abscisic acid 8′- hydroxylase, a key enzyme in the oxidative catabolism of abscisic acid. Plant Physiol. 134:1439-1449.
43. Seo, M., Hanada, A., Kuwahara, A., Endo, A., Okamoto, M., Yamauchi, Y., et al. (2006) Regulation of hormone metabolism in Arabidopsis seeds: phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism. Plant J. 48:354-366.
44. Staswick, P. E., Su, W. and Howell, S. H. (1992) Methyl jasmonate inhibition of root growth and induction of a leaf protein are decreased in an Arabidopsis thaliana mutant. Proc. Natl Acad. Sci. USA 89:6837-6840.
45. Staswick, P. E. and Tiryaki, I. (2004) The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis. Plant Cell 16:2117-2127.
46. Stone, S. L., Braybrook, S. A., Paula, S. L., Kwong, L. W., Meuser, J., Pelletier, J., et al. (2008) Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: implications for somatic embryogenesis. Proc. Natl Acad. Sci. USA 105:3151-3156.
47. To, A., Valon, C., Savino, G., Guilleminot, J., Devic, M., Giraudat, J., et al. (2006) A network of local and redundant gene regulation governs Arabidopsis seed maturation. Plant Cell 18:1642-1651.
48. Varbanova, M., Yamaguchi, S., Yang, Y., McKelvey, K., Hanada, A., Borochov, R., et al. (2007) Methylation of gibberellins by Arabidopsis GAMT1 and GAMT2. Plant Cell 19:32-45.
49. White, C. N., Proebsting, W. M., Hedden, P. and Rivin, C. J. (2000) Gibberellins and seed development in maize. I. Evidence that gibberellin/abscisic acid balance governs germination versus maturation pathways. Plant Physiol, 122:1081-1088.
50. Yamaguchi, S. (2008) Gibberellin metabolism and its regulation. Annu. Rev. Plant Biol. 59:225-251.
51. Yasuda, M., Ishikawa, A., Jikumaru, Y., Seki, M., Umezawa, T., Asami, T., et al. (2008) Antagonistic interaction between systemic acquired resistance and the abscisic acid-mediated abiotic stress response in Arabidopsis. Plant Cell 20:1678-1692.
52. Yoshimoto, K., Jikumaru, Y., Kamiya, Y., Kusano, M., Consonni, C., Panstruga, R., et al. (2009) Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in Arabidopsis. Plant Cell 21:2914-2927.
53. Zaharia, L. I., Galka, M. M., Ambrose, S. J. and Abrams, S. R. (2005) Preparation of deuterated abscisic acid metabolites for use in mass spectrometry and feeding studies. J. Label. Cmpd. Radiopharm. 48:435-445.