메뉴 건너뛰기




Volumn 10, Issue 1, 2014, Pages

NCYM, a Cis-Antisense Gene of MYCN, Encodes a De Novo Evolved Protein That Inhibits GSK3β Resulting in the Stabilization of MYCN in Human Neuroblastomas

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; DACTOLISIB; GLYCOGEN SYNTHASE KINASE 3BETA; MESSENGER RNA; MYCN PROTEIN; NCYM PROTEIN; UNCLASSIFIED DRUG;

EID: 84896730858     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1003996     Document Type: Article
Times cited : (83)

References (46)
  • 1
    • 0017771466 scopus 로고
    • Evolution and tinkering
    • Jacob F, (1977) Evolution and tinkering. Science 196: 1161-1166.
    • (1977) Science , vol.196 , pp. 1161-1166
    • Jacob, F.1
  • 3
    • 80052969570 scopus 로고    scopus 로고
    • The evolutionary origin of orphan genes
    • Tautz D, Domazet-Loso T, (2011) The evolutionary origin of orphan genes. Nat Rev Genet 12: 692-702.
    • (2011) Nat Rev Genet , vol.12 , pp. 692-702
    • Tautz, D.1    Domazet-Loso, T.2
  • 4
    • 78649231644 scopus 로고    scopus 로고
    • Origins, evolution, and phenotypic impact of new genes
    • Kaessmann H, (2010) Origins, evolution, and phenotypic impact of new genes. Genome Res 20: 1313-1326.
    • (2010) Genome Res , vol.20 , pp. 1313-1326
    • Kaessmann, H.1
  • 5
    • 69449089723 scopus 로고    scopus 로고
    • More than just orphans: are taxonomically-restricted genes important in evolution
    • Khalturin K, Hemmrich G, Fraune S, Augustin R, Bosch TC, (2009) More than just orphans: are taxonomically-restricted genes important in evolution? Trends Genet 25: 404-413.
    • (2009) Trends Genet , vol.25 , pp. 404-413
    • Khalturin, K.1    Hemmrich, G.2    Fraune, S.3    Augustin, R.4    Bosch, T.C.5
  • 7
    • 77950521826 scopus 로고    scopus 로고
    • A de novo originated gene depresses budding yeast mating pathway and is repressed by the protein encoded by its antisense strand
    • Li D, Dong Y, Jiang Y, Jiang H, Cai J, et al. (2010) A de novo originated gene depresses budding yeast mating pathway and is repressed by the protein encoded by its antisense strand. Cell Res 20: 408-420.
    • (2010) Cell Res , vol.20 , pp. 408-420
    • Li, D.1    Dong, Y.2    Jiang, Y.3    Jiang, H.4    Cai, J.5
  • 8
    • 33645241471 scopus 로고    scopus 로고
    • Recently evolved genes identified from Drosophila yakuba and D. erecta accessory gland expressed sequence tags
    • Begun DJ, Lindfors HA, Thompson ME, Holloway AK, (2006) Recently evolved genes identified from Drosophila yakuba and D. erecta accessory gland expressed sequence tags. Genetics 172: 1675-1681.
    • (2006) Genetics , vol.172 , pp. 1675-1681
    • Begun, D.J.1    Lindfors, H.A.2    Thompson, M.E.3    Holloway, A.K.4
  • 9
    • 34250748633 scopus 로고    scopus 로고
    • Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba/Drosophila erecta clade
    • Begun DJ, Lindfors HA, Kern AD, Jones CD, (2007) Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba/Drosophila erecta clade. Genetics 176: 1131-1137.
    • (2007) Genetics , vol.176 , pp. 1131-1137
    • Begun, D.J.1    Lindfors, H.A.2    Kern, A.D.3    Jones, C.D.4
  • 10
    • 50649090652 scopus 로고    scopus 로고
    • De novo origination of a new protein-coding gene in Saccharomyces cerevisiae
    • Cai J, Zhao R, Jiang H, Wang W, (2008) De novo origination of a new protein-coding gene in Saccharomyces cerevisiae. Genetics 179: 487-496.
    • (2008) Genetics , vol.179 , pp. 487-496
    • Cai, J.1    Zhao, R.2    Jiang, H.3    Wang, W.4
  • 11
    • 34547637650 scopus 로고    scopus 로고
    • Evolution of hydra, a recently evolved testis-expressed gene with nine alternative first exons in Drosophila melanogaster
    • Chen ST, Cheng HC, Barbash DA, Yang HP, (2007) Evolution of hydra, a recently evolved testis-expressed gene with nine alternative first exons in Drosophila melanogaster. PLoS Genet 3: e107.
    • (2007) PLoS Genet , vol.3
    • Chen, S.T.1    Cheng, H.C.2    Barbash, D.A.3    Yang, H.P.4
  • 13
    • 70349645640 scopus 로고    scopus 로고
    • Recent de novo origin of human protein-coding genes
    • Knowles DG, McLysaght A, (2009) Recent de novo origin of human protein-coding genes. Genome Res 19: 1752-1759.
    • (2009) Genome Res , vol.19 , pp. 1752-1759
    • Knowles, D.G.1    McLysaght, A.2
  • 14
    • 77950801106 scopus 로고    scopus 로고
    • A human-specific de novo protein-coding gene associated with human brain functions
    • Li CY, Zhang Y, Wang Z, Cao C, Zhang PW, et al. (2010) A human-specific de novo protein-coding gene associated with human brain functions. PLoS Comput Biol 6: e1000734.
    • (2010) PLoS Comput Biol , vol.6
    • Li, C.Y.1    Zhang, Y.2    Wang, Z.3    Cao, C.4    Zhang, P.W.5
  • 16
    • 81755187310 scopus 로고    scopus 로고
    • De novo origin of human protein-coding genes
    • Wu DD, Irwin DM, Zhang YP, (2011) De novo origin of human protein-coding genes. PLoS Genet 7: e1002379.
    • (2011) PLoS Genet , vol.7
    • Wu, D.D.1    Irwin, D.M.2    Zhang, Y.P.3
  • 17
    • 84866952741 scopus 로고    scopus 로고
    • Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs
    • Xie C, Zhang YE, Chen JY, Liu CJ, Zhou WZ, et al. (2012) Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs. PLoS Genet 8: e1002942.
    • (2012) PLoS Genet , vol.8
    • Xie, C.1    Zhang, Y.E.2    Chen, J.Y.3    Liu, C.J.4    Zhou, W.Z.5
  • 18
    • 0037366067 scopus 로고    scopus 로고
    • Neuroblastoma: biological insights into a clinical enigma
    • Brodeur GM, (2003) Neuroblastoma: biological insights into a clinical enigma. Nat Rev Cancer 3: 203-216.
    • (2003) Nat Rev Cancer , vol.3 , pp. 203-216
    • Brodeur, G.M.1
  • 19
    • 0021261878 scopus 로고
    • Amplification of N-myc in untreated human neuroblastomas correlates with advanced disease stage
    • Brodeur GM, Seeger RC, Schwab M, Varmus HE, Bishop JM, (1984) Amplification of N-myc in untreated human neuroblastomas correlates with advanced disease stage. Science 224: 1121-1124.
    • (1984) Science , vol.224 , pp. 1121-1124
    • Brodeur, G.M.1    Seeger, R.C.2    Schwab, M.3    Varmus, H.E.4    Bishop, J.M.5
  • 20
    • 0021276218 scopus 로고
    • Chromosome localization in normal human cells and neuroblastomas of a gene related to c-myc
    • Schwab M, Varmus HE, Bishop JM, Grzeschik KH, Naylor SL, et al. (1984) Chromosome localization in normal human cells and neuroblastomas of a gene related to c-myc. Nature 308: 288-291.
    • (1984) Nature , vol.308 , pp. 288-291
    • Schwab, M.1    Varmus, H.E.2    Bishop, J.M.3    Grzeschik, K.H.4    Naylor, S.L.5
  • 21
  • 22
    • 0034327928 scopus 로고    scopus 로고
    • MYCN expression is not prognostic of adverse outcome in advanced-stage neuroblastoma with nonamplified MYCN
    • Cohn SL, London WB, Huang D, Katzenstein HM, Salwen HR, et al. (2000) MYCN expression is not prognostic of adverse outcome in advanced-stage neuroblastoma with nonamplified MYCN. J Clin Oncol 18: 3604-3613.
    • (2000) J Clin Oncol , vol.18 , pp. 3604-3613
    • Cohn, S.L.1    London, W.B.2    Huang, D.3    Katzenstein, H.M.4    Salwen, H.R.5
  • 23
    • 0026552457 scopus 로고
    • Inverse relationship between trk expression and N-myc amplification in human neuroblastomas
    • Nakagawara A, Arima M, Azar CG, Scavarda NJ, Brodeur GM, (1992) Inverse relationship between trk expression and N-myc amplification in human neuroblastomas. Cancer Res 52: 1364-1368.
    • (1992) Cancer Res , vol.52 , pp. 1364-1368
    • Nakagawara, A.1    Arima, M.2    Azar, C.G.3    Scavarda, N.J.4    Brodeur, G.M.5
  • 24
    • 0026881782 scopus 로고
    • Isolation and characterization of complementary DNA for N-cym, a gene encoded by the DNA strand opposite to N-myc
    • Armstrong BC, Krystal GW, (1992) Isolation and characterization of complementary DNA for N-cym, a gene encoded by the DNA strand opposite to N-myc. Cell Growth Differ 3: 385-390.
    • (1992) Cell Growth Differ , vol.3 , pp. 385-390
    • Armstrong, B.C.1    Krystal, G.W.2
  • 25
    • 0025288707 scopus 로고
    • N-myc mRNA forms an RNA-RNA duplex with endogenous antisense transcripts
    • Krystal GW, Armstrong BC, Battey JF, (1990) N-myc mRNA forms an RNA-RNA duplex with endogenous antisense transcripts. Mol Cell Biol 10: 4180-4191.
    • (1990) Mol Cell Biol , vol.10 , pp. 4180-4191
    • Krystal, G.W.1    Armstrong, B.C.2    Battey, J.F.3
  • 28
    • 77749279644 scopus 로고    scopus 로고
    • Myc proteins as therapeutic targets
    • Gustafson WC, Weiss WA, (2010) Myc proteins as therapeutic targets. Oncogene 29: 1249-1259.
    • (2010) Oncogene , vol.29 , pp. 1249-1259
    • Gustafson, W.C.1    Weiss, W.A.2
  • 29
    • 24144441250 scopus 로고    scopus 로고
    • The Cdk1 complex plays a prime role in regulating N-myc phosphorylation and turnover in neural precursors
    • Sjostrom SK, Finn G, Hahn WC, Rowitch DH, Kenney AM, (2005) The Cdk1 complex plays a prime role in regulating N-myc phosphorylation and turnover in neural precursors. Dev Cell 9: 327-338.
    • (2005) Dev Cell , vol.9 , pp. 327-338
    • Sjostrom, S.K.1    Finn, G.2    Hahn, W.C.3    Rowitch, D.H.4    Kenney, A.M.5
  • 31
    • 33750040886 scopus 로고    scopus 로고
    • S6K1 regulates GSK3 under conditions of mTOR-dependent feedback inhibition of Akt
    • Zhang HH, Lipovsky AI, Dibble CC, Sahin M, Manning BD, (2006) S6K1 regulates GSK3 under conditions of mTOR-dependent feedback inhibition of Akt. Mol Cell 24: 185-197.
    • (2006) Mol Cell , vol.24 , pp. 185-197
    • Zhang, H.H.1    Lipovsky, A.I.2    Dibble, C.C.3    Sahin, M.4    Manning, B.D.5
  • 33
    • 84870242293 scopus 로고    scopus 로고
    • Next-generation RNA sequencing reveals differential expression of MYCN target genes and suggests the mTOR pathway as a promising therapy target in MYCN-amplified neuroblastoma
    • Schramm A, Köster J, Marschall T, Martin M, Schwermer M, et al. (2013) Next-generation RNA sequencing reveals differential expression of MYCN target genes and suggests the mTOR pathway as a promising therapy target in MYCN-amplified neuroblastoma. Int J Cancer 132: E106-115.
    • (2013) Int J Cancer , vol.132
    • Schramm, A.1    Köster, J.2    Marschall, T.3    Martin, M.4    Schwermer, M.5
  • 34
    • 42949133285 scopus 로고    scopus 로고
    • Inhibitors of mammalian target of rapamycin downregulate MYCN protein expression and inhibit neuroblastoma growth in vitro and in vivo
    • Johnsen JI, Segerström L, Orrego A, Elfman L, Henriksson M, et al. (2008) Inhibitors of mammalian target of rapamycin downregulate MYCN protein expression and inhibit neuroblastoma growth in vitro and in vivo. Oncogene 27: 2910-2922.
    • (2008) Oncogene , vol.27 , pp. 2910-2922
    • Johnsen, J.I.1    Segerström, L.2    Orrego, A.3    Elfman, L.4    Henriksson, M.5
  • 35
    • 84901245290 scopus 로고    scopus 로고
    • RUNX3 interacts with MYCN and facilitates protein degradation in neuroblastoma
    • Yu F, Gao W, Yokochi T, Suenaga Y, Ando K, et al. (2013) RUNX3 interacts with MYCN and facilitates protein degradation in neuroblastoma. Oncogene [epub ahead of print].
    • (2013) Oncogene
    • Yu, F.1    Gao, W.2    Yokochi, T.3    Suenaga, Y.4    Ando, K.5
  • 36
    • 57849107571 scopus 로고    scopus 로고
    • Stabilization of N-Myc is a critical function of Aurora A in human neuroblastoma
    • Otto T, Horn S, Brockmann M, Eilers U, Schüttrumpf L, et al. (2009) Stabilization of N-Myc is a critical function of Aurora A in human neuroblastoma. Cancer Cell 15: 67-78.
    • (2009) Cancer Cell , vol.15 , pp. 67-78
    • Otto, T.1    Horn, S.2    Brockmann, M.3    Eilers, U.4    Schüttrumpf, L.5
  • 37
    • 84863753157 scopus 로고    scopus 로고
    • The ALK(F1174L) mutation potentiates the oncogenic activity of MYCN in neuroblastoma
    • Berry T, Luther W, Bhatnagar N, Jamin Y, Poon E, et al. (2012) The ALK(F1174L) mutation potentiates the oncogenic activity of MYCN in neuroblastoma. Cancer Cell 22: 117-130.
    • (2012) Cancer Cell , vol.22 , pp. 117-130
    • Berry, T.1    Luther, W.2    Bhatnagar, N.3    Jamin, Y.4    Poon, E.5
  • 38
    • 84863569496 scopus 로고    scopus 로고
    • Targeted expression of mutated ALK induces neuroblastoma in transgenic mice
    • Heukamp LC, Thor T, Schramm A, De Preter K, Kumps C, et al. (2012) Targeted expression of mutated ALK induces neuroblastoma in transgenic mice. Sci Transl Med 4: 141ra191.
    • (2012) Sci Transl Med , vol.4
    • Heukamp, L.C.1    Thor, T.2    Schramm, A.3    De Preter, K.4    Kumps, C.5
  • 39
    • 84868210731 scopus 로고    scopus 로고
    • LIN28B induces neuroblastoma and enhances MYCN levels via let-7 suppression
    • Molenaar JJ, Domingo-Fernandez R, Ebus ME, Lindner S, Koster J, et al. (2012) LIN28B induces neuroblastoma and enhances MYCN levels via let-7 suppression. Nat Genet 44: 1199-1206.
    • (2012) Nat Genet , vol.44 , pp. 1199-1206
    • Molenaar, J.J.1    Domingo-Fernandez, R.2    Ebus, M.E.3    Lindner, S.4    Koster, J.5
  • 40
    • 84869779376 scopus 로고    scopus 로고
    • Functional MYCN signature predicts outcome of neuroblastoma irrespective of MYCN amplification
    • Valentijn LJ, Koster J, Haneveld F, Aissa RA, van Sluis P, et al. (2012) Functional MYCN signature predicts outcome of neuroblastoma irrespective of MYCN amplification. Proc Natl Acad Sci U S A 109: 19190-19195.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 19190-19195
    • Valentijn, L.J.1    Koster, J.2    Haneveld, F.3    Aissa, R.A.4    van Sluis, P.5
  • 41
    • 37549065194 scopus 로고    scopus 로고
    • Inactivation of glycogen synthase kinase-3beta contributes to brain-derived neutrophic factor/TrkB-induced resistance to chemotherapy in neuroblastoma cells
    • Li Z, Tan F, Thiele CJ, (2007) Inactivation of glycogen synthase kinase-3beta contributes to brain-derived neutrophic factor/TrkB-induced resistance to chemotherapy in neuroblastoma cells. Mol Cancer Ther 6: 3113-3121.
    • (2007) Mol Cancer Ther , vol.6 , pp. 3113-3121
    • Li, Z.1    Tan, F.2    Thiele, C.J.3
  • 42
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-the BLAST-like alignment tool
    • Kent WJ, (2002) BLAT-the BLAST-like alignment tool. Genome Res 12: 656-664.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 43
    • 1542748076 scopus 로고    scopus 로고
    • Aligning multiple genomic sequences with the threaded blockset aligner
    • Blanchette M, Kent WJ, Riemer C, Elnitski L, Smit AF, et al. (2004) Aligning multiple genomic sequences with the threaded blockset aligner. Genome Res 14: 708-715.
    • (2004) Genome Res , vol.14 , pp. 708-715
    • Blanchette, M.1    Kent, W.J.2    Riemer, C.3    Elnitski, L.4    Smit, A.F.5
  • 44
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5
  • 45
    • 77951682635 scopus 로고    scopus 로고
    • KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies
    • Wang D, Zhang Y, Zhang Z, Zhu J, Yu J, (2010) KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies. Genomics Proteomics Bioinformatics 8: 77-80.
    • (2010) Genomics Proteomics Bioinformatics , vol.8 , pp. 77-80
    • Wang, D.1    Zhang, Y.2    Zhang, Z.3    Zhu, J.4    Yu, J.5
  • 46
    • 20244385561 scopus 로고    scopus 로고
    • Expression profiling using a tumor-specific cDNA microarray predicts the prognosis of intermediate risk neuroblastomas
    • Ohira M, Oba S, Nakamura Y, Isogai E, Kaneko S, et al. (2005) Expression profiling using a tumor-specific cDNA microarray predicts the prognosis of intermediate risk neuroblastomas. Cancer Cell 7: 337-350.
    • (2005) Cancer Cell , vol.7 , pp. 337-350
    • Ohira, M.1    Oba, S.2    Nakamura, Y.3    Isogai, E.4    Kaneko, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.