메뉴 건너뛰기




Volumn 123, Issue , 2014, Pages 1-21

Markov modeling of ion channels: Implications for understanding disease

Author keywords

Action potential; Ion channel; Kinetic model; Markov chain; Model; Optimisation; Pain; Sodium channel; Voltage clamp; Voltage gated

Indexed keywords

SODIUM CHANNEL NAV1.1; SODIUM CHANNEL NAV1.2; SODIUM CHANNEL NAV1.3; SODIUM CHANNEL NAV1.4; SODIUM CHANNEL NAV1.5; SODIUM CHANNEL NAV1.6; SODIUM CHANNEL NAV1.7; SODIUM CHANNEL NAV1.8; SODIUM CHANNEL NAV1.9; VOLTAGE GATED SODIUM CHANNEL; ION CHANNEL;

EID: 84896725831     PISSN: 18771173     EISSN: None     Source Type: Book Series    
DOI: 10.1016/B978-0-12-397897-400009-7     Document Type: Article
Times cited : (16)

References (54)
  • 3
    • 33645300737 scopus 로고    scopus 로고
    • From molecule to malady
    • F.M. Ashcroft From molecule to malady Nature 440 2006 440 447
    • (2006) Nature , vol.440 , pp. 440-447
    • Ashcroft, F.M.1
  • 4
    • 77955566833 scopus 로고    scopus 로고
    • A Special Issue on channelopathies
    • B. Nilius A Special Issue on channelopathies Pflugers Arch 460 2010 221 222
    • (2010) Pflugers Arch , vol.460 , pp. 221-222
    • Nilius, B.1
  • 5
    • 84866372487 scopus 로고    scopus 로고
    • Neurological perspectives on voltage-gated sodium channels
    • N. Eijkelkamp, J.E. Linley, and M.D. Baker et al. Neurological perspectives on voltage-gated sodium channels Brain 135 2012 2585 2612
    • (2012) Brain , vol.135 , pp. 2585-2612
    • Eijkelkamp, N.1    Linley, J.E.2    Baker, M.D.3
  • 6
    • 77956300047 scopus 로고    scopus 로고
    • Sodium channel SCN1A and epilepsy: Mutations and mechanisms
    • A. Escayg, and A.L. Goldin Sodium channel SCN1A and epilepsy: mutations and mechanisms Epilepsia 51 2010 1650 1658
    • (2010) Epilepsia , vol.51 , pp. 1650-1658
    • Escayg, A.1    Goldin, A.L.2
  • 8
    • 53049098906 scopus 로고    scopus 로고
    • A pore-blocking hydrophobic motif at the cytoplasmic aperture of the closed-state Nav1.7 channel is disrupted by the erythromelalgia-associated F1449V mutation
    • A. Lampert, A.O. O'Reilly, S.D. Dib-Hajj, L. Tyrrell, B.A. Wallace, and S.G. Waxman A pore-blocking hydrophobic motif at the cytoplasmic aperture of the closed-state Nav1.7 channel is disrupted by the erythromelalgia-associated F1449V mutation J Biol Chem 283 2008 24118 24127
    • (2008) J Biol Chem , vol.283 , pp. 24118-24127
    • Lampert, A.1    O'Reilly, A.O.2    Dib-Hajj, S.D.3    Tyrrell, L.4    Wallace, B.A.5    Waxman, S.G.6
  • 9
    • 84861716984 scopus 로고    scopus 로고
    • Voltage-gated sodium channels at 60: Structure, function and pathophysiology
    • W.A. Catterall Voltage-gated sodium channels at 60: structure, function and pathophysiology J Physiol 590 2012 2577 2589
    • (2012) J Physiol , vol.590 , pp. 2577-2589
    • Catterall, W.A.1
  • 10
    • 0036846886 scopus 로고    scopus 로고
    • Tracking voltage-dependent conformational changes in skeletal muscle sodium channel during activation
    • B. Chanda, and F. Bezanilla Tracking voltage-dependent conformational changes in skeletal muscle sodium channel during activation J Gen Physiol 120 2002 629 645
    • (2002) J Gen Physiol , vol.120 , pp. 629-645
    • Chanda, B.1    Bezanilla, F.2
  • 11
    • 0032991943 scopus 로고    scopus 로고
    • Properties of slow, cumulative sodium channel inactivation in rat hippocampal CA1 pyramidal neurons
    • T. Mickus, H. Jung, and N. Spruston Properties of slow, cumulative sodium channel inactivation in rat hippocampal CA1 pyramidal neurons Biophys J 76 1999 846 860
    • (1999) Biophys J , vol.76 , pp. 846-860
    • Mickus, T.1    Jung, H.2    Spruston, N.3
  • 12
    • 84866135637 scopus 로고    scopus 로고
    • Altered fast and slow inactivation of the N440K Nav1.4 mutant in a periodic paralysis syndrome
    • C. Lossin, T.S. Nam, and S. Shahangian et al. Altered fast and slow inactivation of the N440K Nav1.4 mutant in a periodic paralysis syndrome Neurology 79 2012 1033 1040
    • (2012) Neurology , vol.79 , pp. 1033-1040
    • Lossin, C.1    Nam, T.S.2    Shahangian, S.3
  • 13
    • 84879782727 scopus 로고    scopus 로고
    • Painful Na-channelopathies: An expanding universe
    • S.G. Waxman Painful Na-channelopathies: an expanding universe Trends Mol Med 19 2013 406 409
    • (2013) Trends Mol Med , vol.19 , pp. 406-409
    • Waxman, S.G.1
  • 14
    • 37349071555 scopus 로고    scopus 로고
    • The investigational anticonvulsant lacosamide selectively enhances slow inactivation of voltage-gated sodium channels
    • 10.1124/mol.107.039867
    • A.C. Errington, T. Stoehr, C. Heers, and G. Lees The investigational anticonvulsant lacosamide selectively enhances slow inactivation of voltage-gated sodium channels Mol Pharmacol 73 2007 157 169 10.1124/mol.107. 039867
    • (2007) Mol Pharmacol , vol.73 , pp. 157-169
    • Errington, A.C.1    Stoehr, T.2    Heers, C.3    Lees, G.4
  • 15
    • 29844438166 scopus 로고    scopus 로고
    • International Union of Pharmacology. XLVII. Nomenclature and structure-function relationships of voltage-gated sodium channels
    • W.A. Catterall, A.L. Goldin, and S.G. Waxman International Union of Pharmacology. XLVII. Nomenclature and structure-function relationships of voltage-gated sodium channels Pharmacol Rev 57 2005 397 409
    • (2005) Pharmacol Rev , vol.57 , pp. 397-409
    • Catterall, W.A.1    Goldin, A.L.2    Waxman, S.G.3
  • 16
    • 34249791771 scopus 로고    scopus 로고
    • Nav1.1 localizes to axons of parvalbumin-positive inhibitory interneurons: A circuit basis for epileptic seizures in mice carrying an Scn1a gene mutation
    • I. Ogiwara, H. Miyamoto, and N. Morita et al. Nav1.1 localizes to axons of parvalbumin-positive inhibitory interneurons: a circuit basis for epileptic seizures in mice carrying an Scn1a gene mutation J Neurosci 27 2007 5903 5914
    • (2007) J Neurosci , vol.27 , pp. 5903-5914
    • Ogiwara, I.1    Miyamoto, H.2    Morita, N.3
  • 17
    • 34249980057 scopus 로고    scopus 로고
    • A Nav1.7 channel mutation associated with hereditary erythromelalgia contributes to neuronal hyperexcitability and displays reduced lidocaine sensitivity
    • P.L. Sheets, J.O. Jackson 2nd., S.G. Waxman, S.D. Dib-Hajj, and T.R. Cummins A Nav1.7 channel mutation associated with hereditary erythromelalgia contributes to neuronal hyperexcitability and displays reduced lidocaine sensitivity J Physiol 581 2007 1019 1031
    • (2007) J Physiol , vol.581 , pp. 1019-1031
    • Sheets, P.L.1    Jackson II, J.O.2    Waxman, S.G.3    Dib-Hajj, S.D.4    Cummins, T.R.5
  • 18
    • 12344332892 scopus 로고    scopus 로고
    • The molecular machinery of resurgent sodium current revealed
    • B.P. Bean The molecular machinery of resurgent sodium current revealed Neuron 45 2005 185 187
    • (2005) Neuron , vol.45 , pp. 185-187
    • Bean, B.P.1
  • 19
    • 12344303542 scopus 로고    scopus 로고
    • Open-channel block by the cytoplasmic tail of sodium channel beta4 as a mechanism for resurgent sodium current
    • T.M. Grieco, J.D. Malhotra, C. Chen, L.L. Isom, and I.M. Raman Open-channel block by the cytoplasmic tail of sodium channel beta4 as a mechanism for resurgent sodium current Neuron 45 2005 233 244
    • (2005) Neuron , vol.45 , pp. 233-244
    • Grieco, T.M.1    Malhotra, J.D.2    Chen, C.3    Isom, L.L.4    Raman, I.M.5
  • 20
    • 0031010957 scopus 로고    scopus 로고
    • Resurgent sodium current and action potential formation in dissociated cerebellar Purkinje neurons
    • I.M. Raman, and B.P. Bean Resurgent sodium current and action potential formation in dissociated cerebellar Purkinje neurons J Neurosci 17 1997 4517 4526
    • (1997) J Neurosci , vol.17 , pp. 4517-4526
    • Raman, I.M.1    Bean, B.P.2
  • 21
    • 0030834501 scopus 로고    scopus 로고
    • Altered subthreshold sodium currents and disrupted firing patterns in Purkinje neurons of Scn8a mutant mice
    • I.M. Raman, L.K. Sprunger, M.H. Meisler, and B.P. Bean Altered subthreshold sodium currents and disrupted firing patterns in Purkinje neurons of Scn8a mutant mice Neuron 19 1997 881 891
    • (1997) Neuron , vol.19 , pp. 881-891
    • Raman, I.M.1    Sprunger, L.K.2    Meisler, M.H.3    Bean, B.P.4
  • 22
    • 18944369617 scopus 로고    scopus 로고
    • Electrophysiological properties of two axonal sodium channels, Nav1.2 and Nav1.6, expressed in mouse spinal sensory neurones
    • A.M. Rush, S.D. Dib-Hajj, and S.G. Waxman Electrophysiological properties of two axonal sodium channels, Nav1.2 and Nav1.6, expressed in mouse spinal sensory neurones J Physiol 564 2005 803 815
    • (2005) J Physiol , vol.564 , pp. 803-815
    • Rush, A.M.1    Dib-Hajj, S.D.2    Waxman, S.G.3
  • 23
    • 74949144432 scopus 로고    scopus 로고
    • Human voltage-gated sodium channel mutations that cause inherited neuronal and muscle channelopathies increase resurgent sodium currents
    • B.W. Jarecki, A.D. Piekarz, J.O. Jackson 2nd., and T.R. Cummins Human voltage-gated sodium channel mutations that cause inherited neuronal and muscle channelopathies increase resurgent sodium currents J Clin Invest 120 2010 369 378
    • (2010) J Clin Invest , vol.120 , pp. 369-378
    • Jarecki, B.W.1    Piekarz, A.D.2    Jackson II, J.O.3    Cummins, T.R.4
  • 24
    • 79251569257 scopus 로고    scopus 로고
    • Nav1.7 mutations associated with paroxysmal extreme pain disorder, but not erythromelalgia, enhance Navbeta4 peptide-mediated resurgent sodium currents
    • J.W. Theile, B.W. Jarecki, A.D. Piekarz, and T.R. Cummins Nav1.7 mutations associated with paroxysmal extreme pain disorder, but not erythromelalgia, enhance Navbeta4 peptide-mediated resurgent sodium currents J Physiol 589 2011 597 608
    • (2011) J Physiol , vol.589 , pp. 597-608
    • Theile, J.W.1    Jarecki, B.W.2    Piekarz, A.D.3    Cummins, T.R.4
  • 26
  • 27
    • 82455171777 scopus 로고    scopus 로고
    • Intra- and interfamily phenotypic diversity in pain syndromes associated with a gain-of-function variant of NaV1.7
    • M. Estacion, C. Han, and J.S. Choi et al. Intra- and interfamily phenotypic diversity in pain syndromes associated with a gain-of-function variant of NaV1.7 Mol Pain 7 2011 92
    • (2011) Mol Pain , vol.7 , pp. 92
    • Estacion, M.1    Han, C.2    Choi, J.S.3
  • 28
    • 53049109133 scopus 로고    scopus 로고
    • A novel LQT-3 mutation disrupts an inactivation gate complex with distinct rate-dependent phenotypic consequences
    • J.R. Bankston, K.J. Sampson, and S. Kateriya et al. A novel LQT-3 mutation disrupts an inactivation gate complex with distinct rate-dependent phenotypic consequences Channels (Austin) 1 2007 273 280
    • (2007) Channels (Austin) , vol.1 , pp. 273-280
    • Bankston, J.R.1    Sampson, K.J.2    Kateriya, S.3
  • 29
    • 77952514412 scopus 로고    scopus 로고
    • Trafficking defects and gating abnormalities of a novel SCN5A mutation question gene-specific therapy in long QT syndrome type 3
    • Y. Ruan, M. Denegri, and N. Liu et al. Trafficking defects and gating abnormalities of a novel SCN5A mutation question gene-specific therapy in long QT syndrome type 3 Circ Res 106 2010 1374 1383
    • (2010) Circ Res , vol.106 , pp. 1374-1383
    • Ruan, Y.1    Denegri, M.2    Liu, N.3
  • 31
    • 33846231066 scopus 로고    scopus 로고
    • In silico assessment of Y1795C and Y1795H SCN5A mutations: Implication for inherited arrhythmogenic syndromes
    • S. Vecchietti, E. Grandi, and S. Severi et al. In silico assessment of Y1795C and Y1795H SCN5A mutations: implication for inherited arrhythmogenic syndromes Am J Physiol Heart Circ Physiol 292 2007 H56 H65
    • (2007) Am J Physiol Heart Circ Physiol , vol.292
    • Vecchietti, S.1    Grandi, E.2    Severi, S.3
  • 32
    • 33751108977 scopus 로고    scopus 로고
    • Impaired Inactivation Gate Stabilization Predicts Increased Persistent Current for an Epilepsy-Associated SCN1A Mutation
    • K.M. Kahlig, S.N. Misra, and A.L. George Jr. Impaired Inactivation Gate Stabilization Predicts Increased Persistent Current for an Epilepsy-Associated SCN1A Mutation J Neurosci 26 2006 10958 10966
    • (2006) J Neurosci , vol.26 , pp. 10958-10966
    • Kahlig, K.M.1    Misra, S.N.2    George, Jr.A.L.3
  • 33
    • 0000410893 scopus 로고
    • The principles of the stochastic interpretation if ion-channel mechanisms
    • B. Sakmann, E. Neher, Plenum Press New York, NY
    • D. Colquhoun, and A.G. Hawkes The principles of the stochastic interpretation if ion-channel mechanisms B. Sakmann, E. Neher, Single-Channel Recording 1995 Plenum Press New York, NY 397 482
    • (1995) Single-Channel Recording , pp. 397-482
    • Colquhoun, D.1    Hawkes, A.G.2
  • 34
    • 0001774017 scopus 로고
    • Fitting and staistical analysis of single channels records
    • B. Sakmann, E. Neher, Plenum Press New York, NY
    • D. Colquhoun, and J.F. Sigworh Fitting and staistical analysis of single channels records B. Sakmann, E. Neher, Single-Channel Recording 1995 Plenum Press New York, NY 483 589
    • (1995) Single-Channel Recording , pp. 483-589
    • Colquhoun, D.1    Sigworh, J.F.2
  • 35
    • 2942694522 scopus 로고    scopus 로고
    • How to impose microscopic reversibility in complex reaction mechanisms
    • D. Colquhoun, K.A. Dowsland, M. Beato, and A.J. Plested How to impose microscopic reversibility in complex reaction mechanisms Biophys J 86 2004 3510 3518
    • (2004) Biophys J , vol.86 , pp. 3510-3518
    • Colquhoun, D.1    Dowsland, K.A.2    Beato, M.3    Plested, A.J.4
  • 37
    • 0034528895 scopus 로고    scopus 로고
    • Nonlinear thermodynamic models of voltage-dependent currents
    • A. Destexhe, and J.R. Huguenard Nonlinear thermodynamic models of voltage-dependent currents J Comput Neurosci 9 2000 259 270
    • (2000) J Comput Neurosci , vol.9 , pp. 259-270
    • Destexhe, A.1    Huguenard, J.R.2
  • 38
    • 35649001607 scopus 로고
    • A quantitative description of membrane current and its application to conduction and excitation in nerve
    • A.L. Hodgkin, and A.F. Huxley A quantitative description of membrane current and its application to conduction and excitation in nerve J Physiol 117 1952 500 544
    • (1952) J Physiol , vol.117 , pp. 500-544
    • Hodgkin, A.L.1    Huxley, A.F.2
  • 39
    • 76949125485 scopus 로고
    • The components of membrane conductance in the giant axon of Loligo
    • A.L. Hodgkin, and A.F. Huxley The components of membrane conductance in the giant axon of Loligo J Physiol 116 1952 473 496
    • (1952) J Physiol , vol.116 , pp. 473-496
    • Hodgkin, A.L.1    Huxley, A.F.2
  • 40
    • 77956677051 scopus 로고
    • The dual effect of membrane potential on sodium conductance in the giant axon of Loligo
    • A.L. Hodgkin, and A.F. Huxley The dual effect of membrane potential on sodium conductance in the giant axon of Loligo J Physiol 116 1952 497 506
    • (1952) J Physiol , vol.116 , pp. 497-506
    • Hodgkin, A.L.1    Huxley, A.F.2
  • 41
    • 77956707015 scopus 로고
    • Currents carried by sodium and potassium ions through the membrane of the giant axon of Loligo
    • A.L. Hodgkin, and A.F. Huxley Currents carried by sodium and potassium ions through the membrane of the giant axon of Loligo J Physiol 116 1952 449 472
    • (1952) J Physiol , vol.116 , pp. 449-472
    • Hodgkin, A.L.1    Huxley, A.F.2
  • 43
    • 0037114731 scopus 로고    scopus 로고
    • NEUROFIT: Software for fitting Hodgkin-Huxley models to voltage-clamp data
    • A.R. Willms NEUROFIT: software for fitting Hodgkin-Huxley models to voltage-clamp data J Neurosci Methods 121 2002 139 150
    • (2002) J Neurosci Methods , vol.121 , pp. 139-150
    • Willms, A.R.1
  • 44
    • 17844405808 scopus 로고    scopus 로고
    • Maximum likelihood estimation of ion channel kinetics from macroscopic currents
    • L.S. Milescu, G. Akk, and F. Sachs Maximum likelihood estimation of ion channel kinetics from macroscopic currents Biophys J 88 2005 2494 2515
    • (2005) Biophys J , vol.88 , pp. 2494-2515
    • Milescu, L.S.1    Akk, G.2    Sachs, F.3
  • 47
  • 48
    • 34548446631 scopus 로고    scopus 로고
    • Recording, analysis, and function of dendritic voltage-gated channels
    • M. Gurkiewicz, and A. Korngreen Recording, analysis, and function of dendritic voltage-gated channels Pflugers Arch 453 2006 283 292
    • (2006) Pflugers Arch , vol.453 , pp. 283-292
    • Gurkiewicz, M.1    Korngreen, A.2
  • 49
    • 34548403017 scopus 로고    scopus 로고
    • A numerical approach to ion channel modelling using whole-cell voltage-clamp recordings and a genetic algorithm
    • M. Gurkiewicz, and A. Korngreen A numerical approach to ion channel modelling using whole-cell voltage-clamp recordings and a genetic algorithm PLoS Comput Biol 3 2007 e169
    • (2007) PLoS Comput Biol , vol.3 , pp. 169
    • Gurkiewicz, M.1    Korngreen, A.2
  • 50
    • 28044461220 scopus 로고    scopus 로고
    • Constraining compartmental models using multiple voltage recordings and genetic algorithms
    • N. Keren, N. Peled, and A. Korngreen Constraining compartmental models using multiple voltage recordings and genetic algorithms J Neurophysiol 94 2005 3730 3742
    • (2005) J Neurophysiol , vol.94 , pp. 3730-3742
    • Keren, N.1    Peled, N.2    Korngreen, A.3
  • 51
    • 63849182984 scopus 로고    scopus 로고
    • Experimentally guided modelling of dendritic excitability in rat neocortical pyramidal neurones
    • N. Keren, D. Bar-Yehuda, and A. Korngreen Experimentally guided modelling of dendritic excitability in rat neocortical pyramidal neurones J Physiol 587 2009 1413 1437
    • (2009) J Physiol , vol.587 , pp. 1413-1437
    • Keren, N.1    Bar-Yehuda, D.2    Korngreen, A.3
  • 52
    • 79955149190 scopus 로고    scopus 로고
    • Kinetic modeling of Nav1.7 provides insight into erythromelalgia- associated F1449V mutation
    • M. Gurkiewicz, A. Korngreen, S.G. Waxman, and A. Lampert Kinetic modeling of Nav1.7 provides insight into erythromelalgia-associated F1449V mutation J Neurophysiol 105 2011 1546 1557
    • (2011) J Neurophysiol , vol.105 , pp. 1546-1557
    • Gurkiewicz, M.1    Korngreen, A.2    Waxman, S.G.3    Lampert, A.4
  • 53
    • 84887297057 scopus 로고    scopus 로고
    • Accelerating compartmental modeling on a graphical processing unit
    • R. Ben-Shalom, G. Liberman, and A. Korngreen Accelerating compartmental modeling on a graphical processing unit Front Neuroinform 7 2013 4
    • (2013) Front Neuroinform , vol.7 , pp. 4
    • Ben-Shalom, R.1    Liberman, G.2    Korngreen, A.3
  • 54
    • 84859062903 scopus 로고    scopus 로고
    • Optimizing ion channel models using a parallel genetic algorithm on graphical processors
    • R. Ben-Shalom, A. Aviv, B. Razon, and A. Korngreen Optimizing ion channel models using a parallel genetic algorithm on graphical processors J Neurosci Methods 206 2012 183 194
    • (2012) J Neurosci Methods , vol.206 , pp. 183-194
    • Ben-Shalom, R.1    Aviv, A.2    Razon, B.3    Korngreen, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.