Biotechnological applications of wood-rotting fungi: A review

Biomass and Bioenergy

Volumn 62, Issue , 2014, Pages 198-206

  Singh, Adya P ^a   Singh, Tripti ^a  

^a SCION   (New Zealand)

Author keywords

Basidiomycetes; Bioenergy; Bioremediation; Fungal enzyme; Fungal pre treatment

Indexed keywords

BASIDIOMYCETES; BIO-ENERGY; BIOTECHNOLOGICAL APPLICATIONS; ECONOMIC PRODUCTION; FUNGAL ENZYMES; FUNGAL PRE TREATMENTS; FUTURE TECHNOLOGIES; TECHNOLOGICAL DEVELOPMENT;

BIOREMEDIATION; ENZYMES; FUNGI; INDUSTRIAL APPLICATIONS; PROTECTIVE COATINGS; WASTEWATER TREATMENT; WOOD;

BIOTECHNOLOGY;

BIOENERGY; BIOREMEDIATION; ECONOMIC ANALYSIS; ENZYME ACTIVITY; FUNGUS; INDUSTRIAL PRODUCTION; TECHNOLOGICAL DEVELOPMENT; TOXIC SUBSTANCE;

ENZYMES; FUNGI; PROTECTIVE COATINGS; WOOD;

BASIDIOMYCOTA; FUNGI;

EID: 84896700846     PISSN: 09619534     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biombioe.2013.12.013     Document Type: Review

References (102)

1. Koening W. Production of hydrogen-peroxide by wood rotting fungi in wood and its correlation with weight loss, depolymerization, and pH changes. Arch Microbiol 1974, 99(1):129-145.
2. Green F., Highley T.L. Mechanism of brown-rot decay: paradigm or paradox. Int Biodeterior Biodegradation 1997, 39(2-3):113-124.
3. Daniel G. Microview of wood under degradation by bacteria and fungi. Wood deterioration and preservation: advances in our changing world 2003, 34-72. American Chemical Society, Washington DC, [ACS Symposium Series No. 845]. B. Goodell, D.D. Nicholas, T.P. Schultz (Eds.).
4. Goodell B. Brown rot fungal degradation of wood: our evolving view. Wood deterioration and preservation: advances in our changing world 2003, 97-118. American Chemical Society, Washington DC, [ACS Symposium Series No. 845]. B. Goodell, D.D. Nicholas, T.P. Schultz (Eds.).
5. Messner K., Fackler K., Lamaipis P., Gindl W., Srebotnik E., Watanabe T. Overview of white rot research: where we are today. Wood deterioration and preservation: advances in our changing world 2003, 73-96. American Chemical Society, Washington DC, [ACS Symposium Series No. 845]. B. Goodell, D.D. Nicholas, T.P. Schultz (Eds.).
6. Blanchette R.A., Nilsson T., Daniel G.F., Abad A.R. Biological degradation of wood. Archaeological wood: properties, chemistry and preservation 1990, 147-174. American Chemical Society, Washington DC, [Advances in Chemistry; vol. 225]. R.M. Rowell, J. Barbour (Eds.).
7. Eriksson K.E., Blanchette R.A., Ander P. Microbial and enzymatic degradation of wood and wood components 1990, Springer, Berlin.
8. Eaton R.A., Hale M.D.C. Wood: decay, pests, and protection 1993, Chapman & Hall, London.
9. Fackler K., Gradinger C., Schmutzer M., Tavzes C., Burgert I., Schwanninger M. Biotechnological wood modification with selective white-rot fungi and its molecular mechanisms. Food Technol Biotech 2007, 45(3):269-276.
10. Kubicek C.P. The cellulose proteins of Trichoderma reesei: structure, multiplicity, mode of action and regulation of formation. Adv Biochem Eng Biotechnol 1992, 45:1-27.
11. Li X.L., Dien B.S., Cotta M.A., Wu Y.B., Saha B.C. Profile of enzyme production by Trichoderma reesei grown on corn fibre fractions. Appl Biochem Biotechnol 2005, 121(1-3):321-334.
12. Singh A.P. A review of microbial decay types found in wooden objects of cultural heritage recovered from buried and waterlogged environments. J Cult Herit 2012, 13(3):S16-S20.
13. Sabharwal H.S., Akhtar M., Blanchette R.A., Young R.A. Refiner mechanical and biomechanical pulping of Jute. Holzforschung 1995, 49(6):537-544.
14. Bar-Lev S.S., Kirk T.K., Chang H.-M. Fungal treatment can reduce energy requirement for secondary refining of TMP. Tappi J 1982, 65(10):111-113.
15. Abuhasan J., Pellinen J., Joyce T.W., Chang H.-M. Delignification of chemi-thermomechanical pulp by a fungal treatment. Proceedings of the AICHE A-annual meeting. New developments in pulp and bleaching, Washington, DC 1988, 1-7.
16. Leatham G.F., Myers G.C., Wegner T.H. Biomechanical pulping of aspen chips: energy savings resulting from different fungal treatments. Tappi J 1990, 73(5):197-200.
17. Akhtar M., Blanchette R.A., Myers G., Kirk T.K. An overview of biomechanical pulping research. Environmentally friendly technologies for the pulp and paper industry 1998, 309-339. Wiley, New York. R. Young, M. Akhtar (Eds.).
18. Bajpai P., Bajpai P.K., Akhtar M., Jauhari M.B. Biokraft pulping of eucalyptus with selected lignin-degrading fungi. J Pulp Pap Sci 2001, 27(7):235-242.
19. Mansfield S.D. Laccase impregnation during mechanical pulp processing - improved refining efficiency and sheet strength. Appita J 2002, 55(1):49-53.
20. Mendonca R., Guerra A., Ferraz A. Delignification of Pinus taeda wood chips treated with Ceriporiopsis subvermispora for preparing high-yield Kraft pulps. J Chem Technol Biotechnol 2002, 77(4):411-418.
21. Scott G.M., Akhtar M., Swaney R.E., Houtman C.J. Recent developments in biopulping technology at Madison, WI. Progress in biotechnology 21: biotechnology in the pulp and paper industry 2002, 61-72. Elsevier, Amsterdam. L. Viikari, R. Lantto (Eds.).
22. Kang K.Y., Jo B.M., Oh J.S., Mansfield S.D. The effects of biopulping on chemical and energy consumption during Kraft pulping of hybrid poplar. Wood Fiber Sci 2003, 35(4):594-600.
23. Chandra R.P., Ragauskas A.J. Modidfication of high lignin kraft pulps by laccase. Part 2. Xylanase-enhanced strength benefits. Biotechnol Prog 2005, 21(4):1302-1306.
24. Mardones L., Gomide J.L., Freer J., Ferrar A., Rodriguez J. Kraft pulping of Eucalyptus nitens wood chips biotreated by Ceriporiopsis subvermispora. J Chem Technol Biotechnol 2006, 81(4):608-613.
25. Yang Q., Zhan H., Wang S., Fu S., Li K. Modification of Eucalyptus CTMP fibres with white rot fungus Trametes hirsute - effects on fibre morphology and paper physical strengths. Bioresour Technol 2008, 99(17):8118-8124.
26. Wong K.K.Y., Richardson J.D., Mansfield S.D. Enzymatic treatment of mechanical pulp fibres for improving paper making properties. Biotechnol Prog 2000, 16(6):1025-1029. 10-1021/bp 000064d.
27. Maciel M.J.M., Silva A.C., Ribeiro H.C.T. Industrial and biotechnological applications of ligninolytic enzymes of the basidiomycota: a review. Electron J Biotechnol 2010, 13:1-13.
28. Hillis W.E., Sumimoto M. Effect of extractives on pulping. Natural products of woody plants: chemical extraneous to the lignocellulosic cell wall 1989, vol. 2:880-920. Springer-Verlag, Berlin.
29. Beatson R.P., Zhang X., Stebbing D., Saddler J.N. The dissolved and colloid fractions of white water: impact on paper quality and degradation by enzymes. ISWPC June 1999, 7-10. Yokohama, Japan.
30. Del Rio J.C., Gutiérrez A., González-Vila F.J., Martin F. Application of pyrolysis-gas chromatography-mass spectrometry to the analysis of pitch deposits and synthetic polymers in pulp and paper mills. J Anal Appl Pyrol 1999, 49(1-2):165-177.
31. Munkittrick K.R., Sandstrom O. Ecological assessment of pulp mill impacts: issues, concerns, myths, and research needs. Environmental impacts of pulp and paper waste streams 2003, 352-362. SETAC Press, Pensacola, Florida. T.R. Stuthridge, M.R. van den Heuvel, N.A. Marvin, A.H. Slade, J. Gifford (Eds.).
32. Gutiérrez A., del Rio J.C., Martinez A.T. Microbial and enzymatic control of pitch in the pulp and paper industry. Appl Microbiol Biotechnol 2009, 82(6):1005-1018.
33. Farrell R.L., Blanchette R.A., Brush T.S., Hadar Y., Iverson S., Krisa K., et al. Cartpip, a biopulping product for control of pitch and resin acid problems in pulp mills. J Biotechnol 1993, 30(1):115-122.
34. Martinez-Inigo M.J., Gutiérrez A., del Rio J.C., Martinez M.J., Martinez A.T. Time course of fungal removal of lipophilic extractives from Eucalyptus globulus wood. J Biotechnol 2000, 84(2):119-126.
35. Eberhardt T.L., Han J.S., Micales J.A., Young R.A. Decay resistance in conifer seed cones - role of resin acids as inhibitors of decomposition by white rot fungi. Holzforschung 1994, 48:278-284.
36. Van Beek T.A., Kuster B., Chassen F.W., Tienvieri T., Bertaud F., Lenon G., et al. Fungal biotreatment of spruce wood with Trametes versicolor for pitch control: influence of extractive contents, pulping process parameters, paper quality and effluent toxicity. Bioresour Technol 2007, 98(2):302-311.
37. Dorado J., Claassen F.W., van Beek T.A., Lenon G., Wijnberg J.B.P.A., Sierra-Alvarez R. Elimination and detoxification of softwood extractives by white rot fungi. J Biotechnol 2000, 80(3):231-240.
38. Dorado J., van Beek T.A., Claassen F.W., Sierra-Alvarez R. Degradation of lipophilic wood extractive constituents in Pinus sylvestris by the white rot fungi Bjerkandera sp. and Trametes versicolor. Wood Sci Technol 2001, 35(1-2):117-125.
39. Martinez-Inigo M.J., Immerzeal P., Gutiérrez A., del Rio J.C., Sierra-Alvarez R. Biodegradability of extractives in sapwood and heartwood from Scots pine by sapstain and white rot fungi. Holzforschung 1999, 53(3):247-252.
40. Hata K., Matsukura M., Taneda H., Fujita Y. Mill-scale application of enzymatic pitch control during paper production. Enzymes for pulp and paper processing 1996, 280-296. American Chemical Society, Washington DC, [ACS Symposium Series No. 655]. L. Viikari, T.W. Jeffries (Eds.).
41. Fischer K., Messner K. Adsorption of lipase on pulp fibres during biological pitch control in paper industry. Enzyme Microb Technol 1992, 14(6):470-473.
42. Dubé E., Shareck F., Hurtubise Y., Beauregard M., Daneault C. Enzyme-based approaches for pitch control in thermomechanical pulping of softwood and pitch removal in process water. J Chem Technol Biotechnol 2008, 83(9):1261-1266.
43. Karlsson S., Holmbom B., Spetz P., Mustranta A., Buchert J. Reactivity of Trametes laccases with fatty and resin acids. Appl Microbiol Biotechnol 2001, 55(3):317-320.
44. Buchert J., Mustranta A., Tamminen T., Spetz P., Holmbom B. Modification of spruce lignans with Trametes hirsuta laccase. Holzforschung 2002, 56(6):579-584.
45. Zhang X., Renaud S., Paice M. The potential of laccase to remove extractives present in pulp and white water from TMP newsprint mills. J Pulp Pap Sci 2005, 31(4):175-180.
46. Gutiérrez A., del Rio J.C., Rencoret J., Ibarra D., Martinez A.T. Main lipophilic extractives in different paper pulp types can be removed using the laccase-mediator system. Appl Microbiol Biotechnol 2006, 72(4):845-851.
47. Singh A.P., McDonald A.G. Comparison of radiata pine and rubberwood MDF fibres by microscopy. New horizons in wood anatomy 2000, 334-339. Chonnam National University Press, Gwangju. K. YS (Ed.).
48. Singh A.P., Kim Y.S., Chung G.C., Park B.D., Wong A.H.H. TEM examination of surface characteristics of rubberwood (Hevea brasiliensis) HTMP fibres. Holzforschung 2003, 57(6):579-584.
49. Widsten P., Kandelbauer A. Adhesion improvement of lignocellulosic products by enzymatic pretreatment. Biotechnol Adv 2008, 26(4):379-386.
50. Widsten P., Laine J.E., Qvintus-Leino P., Tuoninen S. Effect of high temperature fiberization on the chemical structure of softwood. J Wood Chem Technol 2001, 21(3):237-245.
51. Widsten P., Laine J.E., Qvintus-Leino P., Tuominen S. Effect of high temperature fiberization on the chemical structure of hardwood. Holzforschung 2002, 56(1):51-59.
52. Felby C., Thygesen L.G., Sanadi A., Barsberg S. Native lignin for bonding of fibre boards - evaluation of bonding mechanisms in boards made from laccase treated fibres of beech (Fagus sylvatica). Indust Crops Prod 2004, 20(2):181-189.
53. Leonowicz A., Cho N.S., Luterek J., Wilkolazka A., Wojtas-Wasilewska M., Matuszewska A., et al. Fungal laccase: properties and activity on lignin. J Basic Microbiol 2001, 41(3-4):185-227.
54. Li K.C. The role of enzymes and mediators in white rot fungal degradation of lignocelluloses. Wood deterioration and preservation: advances in our changing world 2003, 196-209. American Chemical Society, Washington DC, [ACS Symposium Series No. 845]. B. Goodell, D.D. Nicholas, T.P. Schultz (Eds.).
55. Regalado C., Garcia-Almendárez B.E., Duarte-Vázquez M.A. Biotechnological applications of peroxidases. Phytochem Rev 2004, 3(1):243-256.
56. Thurston C.F. The structure and function of fungal laccases. Microbiologica 1994, 140(1):19-26.
57. Enoki A., Tanaka H., Fuse G. Degradation of lignin-related compounds, pure cellulose and wood components by white rot and brown rot fungi. Holzforschung 1988, 42(2):85-93.
58. Zheng Y., Pan Z., Zhang R. Overview of biomass pretreatment for cellulosic ethanol production. Int J Agric Biol Eng 2009, 2(3):51-68.
59. Vaidya A., Singh T. Pre-treatment of Pinus radiata substrates by basidiomycetes fungi to enhance enzymatic hydrolysis. Biotechnol Lett 2012, 34(7):1263-1267.
60. Mosier N., Wyman C., Dale B., Elander R., Lee Y.Y., Holtzapple M., et al. Features of promising technologies for pretreatment of lignocellulosic biomass. Bioresour Technol 2005, 96(6):673-686.
61. Taherzadeh M.J., Karami K. Pretreatment of lignocellulosic wastes to improve ethanol and biogas production: a review. Int J Mol Sci 2008, 9(9):1621-1651.
62. Keller F.A., Hamilton J.E., Nguyen Q.A. Microbial pretreatment of biomass - potential for reducing severity of thermomechanical biomass pretreatment. Appl Biochem Biotechnol 2003, 105(1-3):27-41.
63. Lee J.-W., Gwak K.-S., Park J.-Y., Park M.-J., Choi D.-H., Kwon M., et al. Biological pretreatment of softwood Pinus densiflora by three white rot fungi. J Microbiol 2007, 45(6):485-491.
64. Zhang X.Y., Yu H.B., Huang H.Y., Liu Y.X. Evaluation of biological pretreatment with white rot fungi for the enzymatic hydrolysis of bamboo culms. Int Biodeterior Biodegradation 2007, 60(3):159-164.
65. Shi J., Chinn M.S., Sharma-Shivappa R.R. Microbial pretreatment of cotton stalks by solid state cultivation of Phanerochaete chrysosporium. Bioresour Technol 2008, 99(14):6556-6564.
66. Ferraz A., Córdova A.M., Machuka A. Wood biodegradation and enzyme production by Ceriporiopsis subvermispora during solid-state fermentation of Eucalyptus grandis. Enzyme Microb Technol 2003, 32(1):59-65.
67. Ray M.J., Leak D.J., Spanu P.D., Murphy R.J. Brown rot fungal early stage decay mechanism as a biological pretreatment for softwood biomass in biofuel production. Biomass Bioenergy 2010, 34(8):1257-1262.
68. Lee J.-W., Kim H.-Y., Koo B.-W., Choi D.-H., Kwon M., Choi I.-G. Enzymatic saccharification of biologically pretreated Pinus densiflora using enzymes from brown rot fungi. J Biosci Bioeng 2008, 106(2):162-167.
69. Schilling J.S., Tewalt J.P., Duncan S.M. Synergy between pre-treatment lignocellulose modifications and saccharification efficiency in two brown rot fungal system. Appl Microbiol Biotechnol 2009, 84(3):465-475.
70. Mai C., Kües U., Militz H. Biotechnology in the wood industry. Appl Microbiol Biotechnol 2004, 63(5):477-494.
71. Singh A.P., Schmitt U., Dawson B.S.W., Rickard C.L. Biological modification of Pinus radiata wood to enhance penetrability. NZ J Sci 2009, 39(1):145-151.
72. Lehringer C., Richter K., Schwarze F.W.M.R., Militz H. A review on promising approaches for liquid permeability improvement in softwoods. Wood Fiber Sci 2009, 41(4):373-385.
73. Schmidt O., Schmitt U., Moreth U., Potsch T. Wood decay by white rotting basidiomycete Physisporinus vitreus from a cooling tower. Holzforschung 1997, 51(3):193-200.
74. Schwarze F.W.M.R., Landmesser H., Zgraggen B., Heeb M. Permeability changes in heartwood of Picea abies and Abies alba induced by incubation with Physisporinus vitreus. Holzforschung 2006, 60(4):450-454.
75. Lehringer C., Hillebrand K., Richter K., Arnold M., Schwarze F.W.M.R., Militz H. Anatomy of bioincised Norway spruce wood. Int Biodeterior Biodegradation 2010, 64(5):346-355.
76. Nicell J.A., Bewtra J.K., Biswas N., Taylor E. Reactor development for peroxidase catalysed polymerisation and precipitation of phenols from wastewater. Water Res 1993, 27(11):1629-1639.
77. Karam J., Nicell J.A. Potential application of enzymes in waste treatment. J Chem Technol Biotechnol 1997, 69(2):141-153.
78. Singh A.D., Kumar S.R. Ligninolytic fungal laccases and their biotechnological applications. Appl Biochem Biotechnol 2010, 160(6):1760-1788.
79. D'souza T.D., Tiwari R., Sah A.K., Raghukumar C. Enhanced production of laccase by a marine fungus during treatment of coloured effluents and synthetic dyes. Enzyme Microb Technol 2006, 38(3-4):504-511.
80. Raghukumar C., D'souza T.D., Verma A.K. Treatment of coloured effluents with lignin-degrading enzymes: an emerging role of marine derived fungi. Crit Rev Microbiol 2008, 34(3-4):189-206.
81. Rabinovich M.L., Bolobova A.V., Vasilchenko L.G. Fungal decomposition of natural aromatic structures and xenobiotics: a review. Appl Biochem Microbiol 2004, 40(1):1-17.
82. Gianfreda L., Iamarino G., Scelza R., Rao M.A. Oxidative catalysts for the transformation of phenolic pollutants: a brief review. Biocatal Biotransform 2006, 24(3):177-187.
83. Minussi R.C., Pastore M.G., Duran N. Laccase induction in fungi and laccase/N-OH mediator systems applied in paper mill effluent. Bioresour Technol 2007, 98(1):158-164.
84. Caza N., Bewtra J.K., Biswas N., Taylor K.E. Removal of phenolic compounds from synthetic wastewater using soybean peroxidase. Water Res 1999, 33(13):3012-3018.
85. Kennedy K., Alemany K., Warith M. Optimisation of soybean peroxidase treatment of 2,4-dichlorophenol. Water SA 2002, 28(2):149-158.
86. Duarte-Vázquez M.A., Ortega-Tovar M.A., García-Almendárez B.E., Regalado C. Removal of aqueous phenolic compounds from a model system by oxidative polymerization with turnip (Brasica napus L. var. purple top white globe) peroxidase. J Chem Technol Biotechnol 2003, 78(1):42-47.
87. Leontievsky A.A., Myasoedova N.M., Baskunov B.P., Evans C.S., Golovleva L.A. Transformation of 2,4,6-trichlorophenol by the white rot fungi Panus tigrinus and Coriolus versicolor. Biodegradation 2000, 11(5):331-340.
88. Ehlers G.A., Rose P.D. Immobilized white-rot fungal biodegradation of phenol and chlorinated phenol in trickling packed-bed reactors by employing sequencing batch operation. Bioresour Technol 2005, 96(11):1264-1275.
89. Reddy G.V.B., Gelpke M.D.S., Gold M.H. Degradation of 2,4,6-trichlorophenol by Phanerochaete chrysosporium: involvement of reductive dechlorination. J Bacteriol 1998, 180(19):5159-5164.
90. Humphrey D.G. The chemistry of chromated copper arsenate wood preservatives. Rev Inorg Chem 2002, 22(1):1-40.
91. Jamberck J.R., Townsend T., Solo-Gabriele H. Leaching of chromated copper arsenate (CCA) - treated wood in a simulated monofil and its potential impacts to landfill leachate. J Hazard Mater 2006, 135(1-3):21-31.
92. Wolfe-Simon F., Blum J.S., Kulp T.R., Gordon G.W., Hoeft S.E., Pett-Ridge J., et al. A bacterium that can grow by using arsenic instead of phosphorus. Science 2011, 332(6034):1163-1166.
93. Clausen C.A., Smith R.L. Removal of CCA from treated wood by oxalic acid extraction, steam explosion, and bacterial fermentation. J Ind Microbiol Biotechnol 1998, 20(3-4):251-257.
94. Kartal S.N., Munir E., Kakitani T., Imamura Y. Bioremediation of CCA-treated wood by brown rot fungi Fomitopsis palustris, Coniophora puteana, and Laetiporus sulphureus. J Wood Sci 2004, 50(2):182-188.
95. Kartal S.N., Kose C. Remediation of CCA-C treated wood using chelating agents. Holz Roh Werst 2003, 61(5):382-387.
96. Sierra-Alvarez R. Removal of copper, chromium and arsenic from preservative-treated wood by chemical extraction-fungal bioleaching. Waste Manag 2009, 29(6):1885-1891.
97. Mileski G.J., Bumpus J.A., Jurek M.A., Aust S.D. Biodegradation of pentachlorophenol by the white rot fungus Phanerochaete chrysosporium. Appl Environ Microbiol 1988, 54(12):2885-2889.
98. Field J.A., De Jong E., Costa G.F., De Bont J.A.M. Biodegradation of poly cyclic aromatic hydrocarbons by new isolates of white rot fungi. Appl Environ Microbiol 1992, 58(7):2219-2226.
99. Sack U., Heinze T.M., Deck J., Cerniglia C.E., Martens R., Zadrazil F., et al. Comparison of phenanthrene and pyrene degradation by different wood decay fungi. Appl Environ Microbiol 1997, 63(10):3919-3925.
100. Ribichich K.F., Lopez S.E. Fungal decay in creosote-treated Eucalyptus power transmission poles. Mat U Org 1996, 30(1):63-72.
101. Flores C., Vidal C., Trejo-Hernandez H.R., Galindo E., Serano-Carreon L. Selection of Trichoderma strains capable of increasing laccase production by Pleurotus ostreatus and Agaricus bisporus in dual cultures. J Appl Micobiol 2009, 106(1):249-257.
102. Sarma V.V., Hyde K.D. A review of frequently occurring fungi in mangroves. Fungal Divers 2001, 8:1-34.