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Volumn 18, Issue 1, 2014, Pages 68-71

NusG/Spt5: Are there common functions of this ubiquitous transcription elongation factor?

Author keywords

[No Author keywords available]

Indexed keywords

DNA; MEMBRANE PROTEIN; NUSG PROTEIN; RFAH PROTEIN; RNA; RNA POLYMERASE; SPT5 PROTEIN; TRANSCRIPTION ELONGATION FACTOR; UNCLASSIFIED DRUG; DNA DIRECTED RNA POLYMERASE; ELONGATION FACTOR; ESCHERICHIA COLI PROTEIN; NONHISTONE PROTEIN; NUSG PROTEIN, E COLI; RFAH PROTEIN, E COLI; SPT5 TRANSCRIPTIONAL ELONGATION FACTOR; TRANSACTIVATOR PROTEIN; TRANSCRIPTION FACTOR;

EID: 84896000321     PISSN: 13695274     EISSN: 18790364     Source Type: Journal    
DOI: 10.1016/j.mib.2014.02.005     Document Type: Review
Times cited : (39)

References (39)
  • 1
    • 0030296854 scopus 로고    scopus 로고
    • KOW: a novel motif linking a bacterial transcription factor with ribosomal proteins
    • Kyrpides N.C., Woese C.R., Ouzounis C.A. KOW: a novel motif linking a bacterial transcription factor with ribosomal proteins. Trends Biochem Sci 1996, 21:425-426.
    • (1996) Trends Biochem Sci , vol.21 , pp. 425-426
    • Kyrpides, N.C.1    Woese, C.R.2    Ouzounis, C.A.3
  • 2
    • 0037009445 scopus 로고    scopus 로고
    • Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities
    • Steiner T., Kaiser J.T., Marinkoviç S., Huber R., Wahl M.C. Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities. EMBO J 2002, 21:4641-4653.
    • (2002) EMBO J , vol.21 , pp. 4641-4653
    • Steiner, T.1    Kaiser, J.T.2    Marinkoviç, S.3    Huber, R.4    Wahl, M.C.5
  • 3
    • 55249117324 scopus 로고    scopus 로고
    • Core structure of the yeast spt4-spt5 complex: a conserved module for regulation of transcription elongation
    • Guo M., Xu F., Yamada J., Egelhofer T., Gao Y., Hartzog G.A., Teng M., Niu L. Core structure of the yeast spt4-spt5 complex: a conserved module for regulation of transcription elongation. Structure 2008, 16:1649-1658.
    • (2008) Structure , vol.16 , pp. 1649-1658
    • Guo, M.1    Xu, F.2    Yamada, J.3    Egelhofer, T.4    Gao, Y.5    Hartzog, G.A.6    Teng, M.7    Niu, L.8
  • 4
    • 68149163147 scopus 로고    scopus 로고
    • Crystal structure of NusG N-terminal (NGN) domain from Methanocaldococcus jannaschii and its interaction with rpoE″
    • Zhou H., Liu Q., Gao Y., Teng M., Niu L. Crystal structure of NusG N-terminal (NGN) domain from Methanocaldococcus jannaschii and its interaction with rpoE″. Proteins 2009, 76:787-793.
    • (2009) Proteins , vol.76 , pp. 787-793
    • Zhou, H.1    Liu, Q.2    Gao, Y.3    Teng, M.4    Niu, L.5
  • 5
    • 67650676737 scopus 로고    scopus 로고
    • Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators
    • Mooney R.A., Schweimer K., Rosch P., Gottesman M., Landick R. Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators. J Mol Biol 2009, 391:341-358.
    • (2009) J Mol Biol , vol.391 , pp. 341-358
    • Mooney, R.A.1    Schweimer, K.2    Rosch, P.3    Gottesman, M.4    Landick, R.5
  • 6
    • 78649866419 scopus 로고    scopus 로고
    • Functional analysis of Thermus thermophilus transcription factor NusG
    • Sevostyanova A., Artsimovitch I. Functional analysis of Thermus thermophilus transcription factor NusG. Nucleic Acids Res 2010, 38:7432-7445.
    • (2010) Nucleic Acids Res , vol.38 , pp. 7432-7445
    • Sevostyanova, A.1    Artsimovitch, I.2
  • 9
    • 78650418915 scopus 로고    scopus 로고
    • Interaction surface of the transcription terminator Rho required to form a complex with the C-terminal domain of the antiterminator NusG
    • Chalissery J., Muteeb G., Kalarickal N.C., Mohan S., Jisha V., Sen R. Interaction surface of the transcription terminator Rho required to form a complex with the C-terminal domain of the antiterminator NusG. J Mol Biol 2011, 405:49-64.
    • (2011) J Mol Biol , vol.405 , pp. 49-64
    • Chalissery, J.1    Muteeb, G.2    Kalarickal, N.C.3    Mohan, S.4    Jisha, V.5    Sen, R.6
  • 11
    • 84870497149 scopus 로고    scopus 로고
    • Rho and NusG suppress pervasive antisense transcription in Escherichia coli
    • Peters J.M., Mooney R.A., Grass J.A., Jessen E.D., Tran F., Landick R. Rho and NusG suppress pervasive antisense transcription in Escherichia coli. Genes Dev 2012, 26:2621-2633.
    • (2012) Genes Dev , vol.26 , pp. 2621-2633
    • Peters, J.M.1    Mooney, R.A.2    Grass, J.A.3    Jessen, E.D.4    Tran, F.5    Landick, R.6
  • 12
    • 0033032384 scopus 로고    scopus 로고
    • Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG
    • Zellars M., Squires C.L. Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG. Mol Microbiol 1999, 32:1296-1304.
    • (1999) Mol Microbiol , vol.32 , pp. 1296-1304
    • Zellars, M.1    Squires, C.L.2
  • 13
    • 0036275511 scopus 로고    scopus 로고
    • Requirement for NusG for transcription antitermination in vivo by the lambda N protein
    • Zhou Y., Filter J.J., Court D.L., Gottesman M.E., Friedman D.I. Requirement for NusG for transcription antitermination in vivo by the lambda N protein. J Bacteriol 2002, 184:3416-3418.
    • (2002) J Bacteriol , vol.184 , pp. 3416-3418
    • Zhou, Y.1    Filter, J.J.2    Court, D.L.3    Gottesman, M.E.4    Friedman, D.I.5
  • 14
  • 16
    • 0030950638 scopus 로고    scopus 로고
    • RNA polymerase switches between inactivated and activated states by translocating back and forth along the DNA and the RNA
    • Komissarova N., Kashlev M. RNA polymerase switches between inactivated and activated states by translocating back and forth along the DNA and the RNA. J Biol Chem 1997, 272:15329-15338.
    • (1997) J Biol Chem , vol.272 , pp. 15329-15338
    • Komissarova, N.1    Kashlev, M.2
  • 17
    • 84862673628 scopus 로고    scopus 로고
    • RNA polymerase backtracking in gene regulation and genome instability
    • Nudler E. RNA polymerase backtracking in gene regulation and genome instability. Cell 2012, 149:1438-1445.
    • (2012) Cell , vol.149 , pp. 1438-1445
    • Nudler, E.1
  • 18
    • 77951589688 scopus 로고    scopus 로고
    • Cooperation between translating ribosomes and RNA polymerase in transcription elongation
    • Proshkin S., Rahmouni A.R., Mironov A., Nudler E. Cooperation between translating ribosomes and RNA polymerase in transcription elongation. Science 2010, 328:504-508.
    • (2010) Science , vol.328 , pp. 504-508
    • Proshkin, S.1    Rahmouni, A.R.2    Mironov, A.3    Nudler, E.4
  • 19
    • 84872424651 scopus 로고    scopus 로고
    • The Spt4-Spt5 complex: a multi-faceted regulator of transcription elongation
    • Hartzog G.A., Fu J. The Spt4-Spt5 complex: a multi-faceted regulator of transcription elongation. Biochim Biophys Acta 2013, 1829:105-115.
    • (2013) Biochim Biophys Acta , vol.1829 , pp. 105-115
    • Hartzog, G.A.1    Fu, J.2
  • 20
    • 0011189690 scopus 로고
    • Isolation and characterization of conditional lethal mutants of Escherichia coli defective in transcription termination factor rho
    • Das A., Court D., Adhya S. Isolation and characterization of conditional lethal mutants of Escherichia coli defective in transcription termination factor rho. Proc Natl Acad Sci USA 1976, 73:1959-1963.
    • (1976) Proc Natl Acad Sci USA , vol.73 , pp. 1959-1963
    • Das, A.1    Court, D.2    Adhya, S.3
  • 21
    • 0032904686 scopus 로고    scopus 로고
    • Autogenous regulation of transcription termination factor Rho and the requirement for Nus factors in Bacillus subtilis
    • Ingham C.J., Dennis J., Furneaux P.A. Autogenous regulation of transcription termination factor Rho and the requirement for Nus factors in Bacillus subtilis. Mol Microbiol 1999, 31:651-663.
    • (1999) Mol Microbiol , vol.31 , pp. 651-663
    • Ingham, C.J.1    Dennis, J.2    Furneaux, P.A.3
  • 24
    • 77954889072 scopus 로고    scopus 로고
    • Interactions between DSIF (DR B sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex
    • Missra A., Gilmour D.S. Interactions between DSIF (DR B sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex. Proc Natl Acad Sci USA 2010, 107:11301-11306.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 11301-11306
    • Missra, A.1    Gilmour, D.S.2
  • 25
    • 79953779997 scopus 로고    scopus 로고
    • Architecture of the RNA polymerase-Spt4/5 complex and basis of universal transcription processivity
    • Martinez-Rucobo F.W., Sainsbury S., Cheung A.C., Cramer P. Architecture of the RNA polymerase-Spt4/5 complex and basis of universal transcription processivity. EMBO J 2011, 30:1302-1310.
    • (2011) EMBO J , vol.30 , pp. 1302-1310
    • Martinez-Rucobo, F.W.1    Sainsbury, S.2    Cheung, A.C.3    Cramer, P.4
  • 26
    • 77953082083 scopus 로고    scopus 로고
    • E. coli NusG inhibits backtracking and accelerates pause-free transcription by promoting forward translocation of RNA polymerase
    • Herbert K.M., Zhou J., Mooney R.A., Porta A.L., Landick R., Block S.M. E. coli NusG inhibits backtracking and accelerates pause-free transcription by promoting forward translocation of RNA polymerase. J Mol Biol 2010, 399:17-30.
    • (2010) J Mol Biol , vol.399 , pp. 17-30
    • Herbert, K.M.1    Zhou, J.2    Mooney, R.A.3    Porta, A.L.4    Landick, R.5    Block, S.M.6
  • 29
    • 55849112295 scopus 로고    scopus 로고
    • Function of the Bacillus subtilis transcription elongation factor NusG in hairpin-dependent RNA polymerase pausing in the trp leader
    • Yakhnin A.V., Yakhnin H., Babitzke P. Function of the Bacillus subtilis transcription elongation factor NusG in hairpin-dependent RNA polymerase pausing in the trp leader. Proc Natl Acad Sci USA 2008, 105:16131-16136.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 16131-16136
    • Yakhnin, A.V.1    Yakhnin, H.2    Babitzke, P.3
  • 30
    • 0037143667 scopus 로고    scopus 로고
    • NusA-stimulated RNA polymerase pausing and termination participates in the Bacillus subtilis trp operon attenuation mechanism in vitro
    • Yakhnin A.V., Babitzke P. NusA-stimulated RNA polymerase pausing and termination participates in the Bacillus subtilis trp operon attenuation mechanism in vitro. Proc Natl Acad Sci USA 2002, 99:11067-11072.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 11067-11072
    • Yakhnin, A.V.1    Babitzke, P.2
  • 31
    • 33750972017 scopus 로고    scopus 로고
    • RNA polymerase pausing regulates translation initiation by providing additional time for TRAP-RNA interaction
    • Yakhnin A.V., Yakhnin H., Babitzke P. RNA polymerase pausing regulates translation initiation by providing additional time for TRAP-RNA interaction. Mol Cell 2006, 24:547-557.
    • (2006) Mol Cell , vol.24 , pp. 547-557
    • Yakhnin, A.V.1    Yakhnin, H.2    Babitzke, P.3
  • 32
    • 77951565527 scopus 로고    scopus 로고
    • Mechanism of NusG-stimulated pausing, hairpin-dependent pause site selection and intrinsic termination at overlapping pause and termination sites in the Bacillus subtilis trp leader
    • Yakhnin A.V., Babitzke P. Mechanism of NusG-stimulated pausing, hairpin-dependent pause site selection and intrinsic termination at overlapping pause and termination sites in the Bacillus subtilis trp leader. Mol Microbiol 2010, 76:690-705.
    • (2010) Mol Microbiol , vol.76 , pp. 690-705
    • Yakhnin, A.V.1    Babitzke, P.2
  • 33
    • 0037133970 scopus 로고    scopus 로고
    • The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand
    • Artsimovitch I., Landick R. The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand. Cell 2002, 109:193-203.
    • (2002) Cell , vol.109 , pp. 193-203
    • Artsimovitch, I.1    Landick, R.2
  • 34
    • 84873323216 scopus 로고    scopus 로고
    • Structural basis of transcriptional pausing in bacteria
    • Weixlbaumer A., Leon K., Landick R., Darst S.A. Structural basis of transcriptional pausing in bacteria. Cell 2013, 152:431-441.
    • (2013) Cell , vol.152 , pp. 431-441
    • Weixlbaumer, A.1    Leon, K.2    Landick, R.3    Darst, S.A.4
  • 37
    • 80052008241 scopus 로고    scopus 로고
    • Linking RNA polymerase backtracking to genome instability in E. coli
    • Dutta D., Shatalin K., Epshtein V., Gottesman M.E., Nudler E. Linking RNA polymerase backtracking to genome instability in E. coli. Cell 2011, 146:533-543.
    • (2011) Cell , vol.146 , pp. 533-543
    • Dutta, D.1    Shatalin, K.2    Epshtein, V.3    Gottesman, M.E.4    Nudler, E.5
  • 39
    • 0031058485 scopus 로고    scopus 로고
    • Nuclease cleavage of the upstream half of the nontemplate strand DNA in an Escherichia coli transcription elongation complex causes upstream translocation and transcriptional arrest
    • Wang D., Landick R. Nuclease cleavage of the upstream half of the nontemplate strand DNA in an Escherichia coli transcription elongation complex causes upstream translocation and transcriptional arrest. J Biol Chem 1997, 272:5989-5994.
    • (1997) J Biol Chem , vol.272 , pp. 5989-5994
    • Wang, D.1    Landick, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.