-
1
-
-
0030718529
-
RfaH and the ops element, components of a novel system controlling bacterial transcription elongation
-
Bailey, M.J.A., Hughes, C., and Koronakis, V. (1997) RfaH and the ops element, components of a novel system controlling bacterial transcription elongation. Mol Microbiol 26: 845-851.
-
(1997)
Mol Microbiol
, vol.26
, pp. 845-851
-
-
Bailey, M.J.A.1
Hughes, C.2
Koronakis, V.3
-
2
-
-
0022345597
-
Autogenous regulation of transcription termination factor Rho
-
Barik, S., Bhattacharya, P., and Das, A. (1985) Autogenous regulation of transcription termination factor Rho. J Mol Biol 182: 495-508.
-
(1985)
J Mol Biol
, vol.182
, pp. 495-508
-
-
Barik, S.1
Bhattacharya, P.2
Das, A.3
-
3
-
-
0022402332
-
Evidence for the presence of cAMP, cAMP receptor and transcription termination factor Rho in different Gram-negative bacteria
-
Biville, F., and Guiso, N. (1985) Evidence for the presence of cAMP, cAMP receptor and transcription termination factor Rho in different Gram-negative bacteria. J Gen Microbiol 131: 2953-2960.
-
(1985)
J Gen Microbiol
, vol.131
, pp. 2953-2960
-
-
Biville, F.1
Guiso, N.2
-
4
-
-
0023666140
-
Transcription termination factor Rho is an RNA-DNA helicase
-
Brennan, C.A., Dombroski, A.J., and Platt, T. (1987) Transcription termination factor Rho is an RNA-DNA helicase. Cell 48: 945-952.
-
(1987)
Cell
, vol.48
, pp. 945-952
-
-
Brennan, C.A.1
Dombroski, A.J.2
Platt, T.3
-
5
-
-
0031921626
-
The NMR structure of the RNA binding domain of E. coli Rho factor suggests possible RNA-protein interactions
-
Briercheck, D.M., Wood, T.C., Allison, T.J., Richardson, J.P., and Rule, G.S. (1998) The NMR structure of the RNA binding domain of E. coli Rho factor suggests possible RNA-protein interactions. Nature Struct Biol 5: 393-399.
-
(1998)
Nature Struct Biol
, vol.5
, pp. 393-399
-
-
Briercheck, D.M.1
Wood, T.C.2
Allison, T.J.3
Richardson, J.P.4
Rule, G.S.5
-
6
-
-
0029002685
-
NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator
-
Burns, C.M., and Richardson, J.P. (1995) NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator. Proc Natl Acad Sci USA 92: 4738-4742.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 4738-4742
-
-
Burns, C.M.1
Richardson, J.P.2
-
7
-
-
0029076127
-
NusG overexpression inhibits Rho-dependent termination in E. coli
-
Burova, E., and Gottesman, M.E. (1995) NusG overexpression inhibits Rho-dependent termination in E. coli. Mol Microbiol 17: 633-641.
-
(1995)
Mol Microbiol
, vol.17
, pp. 633-641
-
-
Burova, E.1
Gottesman, M.E.2
-
8
-
-
0028261399
-
E. coli-S. typhimurium hybrid nusA genes: Identification of a short motif required for action of the λN transcription antitermination protein
-
Craven, M.G., Granston, A.E., Schauer, A.T., Zheng, C., Gray, T.A., and Friedman, D.I. (1994) E. coli-S. typhimurium hybrid nusA genes: identification of a short motif required for action of the λN transcription antitermination protein. J Bacteriol 176: 1394-1404.
-
(1994)
J Bacteriol
, vol.176
, pp. 1394-1404
-
-
Craven, M.G.1
Granston, A.E.2
Schauer, A.T.3
Zheng, C.4
Gray, T.A.5
Friedman, D.I.6
-
9
-
-
0025228699
-
Sequence and transcriptional pattern of the essential E. coli secE-nusG operon
-
Downing, W.L., Sullivan, S.L., Gottesman, M.E., and Dennis, P.P. (1990) Sequence and transcriptional pattern of the essential E. coli secE-nusG operon. J Bacteriol 172: 1621-1627.
-
(1990)
J Bacteriol
, vol.172
, pp. 1621-1627
-
-
Downing, W.L.1
Sullivan, S.L.2
Gottesman, M.E.3
Dennis, P.P.4
-
10
-
-
0028829125
-
The minimal gene complement of Mycoplasma genitalium
-
Fraser, C.M., Gocayne, J.D., White, O., Adams, M.D., Clayton, R.A., Fleischmann, R.D., et al. (1995) The minimal gene complement of Mycoplasma genitalium. Science 270: 397-403.
-
(1995)
Science
, vol.270
, pp. 397-403
-
-
Fraser, C.M.1
Gocayne, J.D.2
White, O.3
Adams, M.D.4
Clayton, R.A.5
Fleischmann, R.D.6
-
11
-
-
0029927350
-
The R. sphaeroides 2.4.1. rho gene: Expression and genetic analysis of structure and function
-
Gomelsky, M., and Kaplan, S. (1996) The R. sphaeroides 2.4.1. rho gene: expression and genetic analysis of structure and function. J Bacteriol 178: 1946-1954.
-
(1996)
J Bacteriol
, vol.178
, pp. 1946-1954
-
-
Gomelsky, M.1
Kaplan, S.2
-
12
-
-
0032004953
-
Evidence that Spt4, Spt5 and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae
-
Hartzog, G.A., Wada, T., Handa, H., and Winston, F. (1998) Evidence that Spt4, Spt5 and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae. Genes Dev 12: 357-369.
-
(1998)
Genes Dev
, vol.12
, pp. 357-369
-
-
Hartzog, G.A.1
Wada, T.2
Handa, H.3
Winston, F.4
-
14
-
-
0030443623
-
Control of transcription termination in prokaryotes
-
Henkin, T.M. (1996) Control of transcription termination in prokaryotes. Annu Rev Genet 30: 35-57.
-
(1996)
Annu Rev Genet
, vol.30
, pp. 35-57
-
-
Henkin, T.M.1
-
15
-
-
0031580197
-
The quaternary geometry of transcription termination factor Rho: Assignment by chemical cross-linking
-
Horiguchi, T., Miwa, Y., and Shigesada, K. (1997) The quaternary geometry of transcription termination factor Rho: assignment by chemical cross-linking. J Mol Biol 269: 514-528.
-
(1997)
J Mol Biol
, vol.269
, pp. 514-528
-
-
Horiguchi, T.1
Miwa, Y.2
Shigesada, K.3
-
16
-
-
0018819841
-
Transcription termination factor Rho from B. subtilis
-
Hwang, J.-Y., and Doi, R.H. (1980) Transcription termination factor Rho from B. subtilis. Eur J Biochem 104: 313-320.
-
(1980)
Eur J Biochem
, vol.104
, pp. 313-320
-
-
Hwang, J.-Y.1
Doi, R.H.2
-
17
-
-
0028930044
-
Rho-independent terminators without 3′ poly-U tails from the early region of actinophage øC31
-
Ingham, C.J., Hunter, I.S., and Smith, M.C.M. (1995) Rho-independent terminators without 3′ poly-U tails from the early region of actinophage øC31. Nucleic Acids Res 23: 370-376.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 370-376
-
-
Ingham, C.J.1
Hunter, I.S.2
Smith, M.C.M.3
-
18
-
-
0029809110
-
Isolation and sequencing of the rho gene from Streptomyces lividans ZX7 and characterisation of the RNA-dependent ATPase activity of the overexpressed protein
-
Ingham, C.J., Hunter, I.S., and Smith, M.C.M. (1996) Isolation and sequencing of the rho gene from Streptomyces lividans ZX7 and characterisation of the RNA-dependent ATPase activity of the overexpressed protein. J Biol Chem 271: 21803-21807.
-
(1996)
J Biol Chem
, vol.271
, pp. 21803-21807
-
-
Ingham, C.J.1
Hunter, I.S.2
Smith, M.C.M.3
-
19
-
-
0027440950
-
Isolation and characterisation of the secE homologue gene of B. subtilis
-
Joeng, S.M., Yoshikawa, H., and Takahashi, H. (1993) Isolation and characterisation of the secE homologue gene of B. subtilis. Mol Microbiol 10: 133-142.
-
(1993)
Mol Microbiol
, vol.10
, pp. 133-142
-
-
Joeng, S.M.1
Yoshikawa, H.2
Takahashi, H.3
-
20
-
-
12044255564
-
Elongation factor NusG interacts with termination factor Rho to regulate termination and antitermination of transcription
-
Li, J., Mason, S.W., and Greenblatt, J. (1993) Elongation factor NusG interacts with termination factor Rho to regulate termination and antitermination of transcription. Genes Dev 7: 161-172.
-
(1993)
Genes Dev
, vol.7
, pp. 161-172
-
-
Li, J.1
Mason, S.W.2
Greenblatt, J.3
-
21
-
-
0029998144
-
A NusG-like protein from T. maritima binds to DNA and RNA
-
Liao, D., Lurz, R., Dobrinski, B., and Dennis, P.P. (1996) A NusG-like protein from T. maritima binds to DNA and RNA. J Bacteriol 178: 4089-4098.
-
(1996)
J Bacteriol
, vol.178
, pp. 4089-4098
-
-
Liao, D.1
Lurz, R.2
Dobrinski, B.3
Dennis, P.P.4
-
22
-
-
0029816948
-
The antibiotic bicyclomycin affects the secondary RNA binding site of E. coli transcription termination factor Rho
-
Magyar, A., Zhang, X., Kohn, H., and Widger, W.R. (1996) The antibiotic bicyclomycin affects the secondary RNA binding site of E. coli transcription termination factor Rho. J Biol Chem 271: 25369-25374.
-
(1996)
J Biol Chem
, vol.271
, pp. 25369-25374
-
-
Magyar, A.1
Zhang, X.2
Kohn, H.3
Widger, W.R.4
-
23
-
-
0022637897
-
Autogenous regulation of the gene for transcription termination factor Rho in E. coli - Localization and function of its attenuators
-
Matsumoto, Y., Shigesada, K., Hirano, M., and Imai, M. (1986) Autogenous regulation of the gene for transcription termination factor Rho in E. coli - localization and function of its attenuators. J Bacteriol 166: 945-958.
-
(1986)
J Bacteriol
, vol.166
, pp. 945-958
-
-
Matsumoto, Y.1
Shigesada, K.2
Hirano, M.3
Imai, M.4
-
24
-
-
0029565119
-
Structural and functional dissections of transcription termination factor Rho by random mutagenesis
-
Miwa, Y., Horiguchi, T., and Shigesada, K. (1995) Structural and functional dissections of transcription termination factor Rho by random mutagenesis. J Mol Biol 254: 815-835.
-
(1995)
J Mol Biol
, vol.254
, pp. 815-835
-
-
Miwa, Y.1
Horiguchi, T.2
Shigesada, K.3
-
26
-
-
0028935455
-
SubtiList: A relational database for the Bacillus subtilis genome
-
Moszer, I., Glaser, P., and Danchin, A. (1995) SubtiList: a relational database for the Bacillus subtilis genome. Microbiology 141: 261-268.
-
(1995)
Microbiology
, vol.141
, pp. 261-268
-
-
Moszer, I.1
Glaser, P.2
Danchin, A.3
-
27
-
-
0027944318
-
A quaternary transcription termination complex - Reciprocal stabilisation by Rho-factor and NusG protein
-
Nehrke, K.W., and Platt, T. (1994) A quaternary transcription termination complex - reciprocal stabilisation by Rho-factor and NusG protein. J Mol Biol 243: 830-839.
-
(1994)
J Mol Biol
, vol.243
, pp. 830-839
-
-
Nehrke, K.W.1
Platt, T.2
-
28
-
-
0015406798
-
Bicyclomycin: A new antibiotic. III. In vitro and in vivo antimicrobial activity
-
Nishida, M., Mine, Y., and Matsubara, T. (1972) Bicyclomycin: a new antibiotic. III. In vitro and in vivo antimicrobial activity. J Antibiot 25: 582-593.
-
(1972)
J Antibiot
, vol.25
, pp. 582-593
-
-
Nishida, M.1
Mine, Y.2
Matsubara, T.3
-
29
-
-
0030026271
-
Characterization of an unusual Rho factor from the high GC gram-positive bacterium M. luteus
-
Nowatzke, W.L., and Richardson, J.P. (1996) Characterization of an unusual Rho factor from the high GC gram-positive bacterium M. luteus. J Biol Chem 271: 742-747.
-
(1996)
J Biol Chem
, vol.271
, pp. 742-747
-
-
Nowatzke, W.L.1
Richardson, J.P.2
-
30
-
-
0030755556
-
Transcription termination factor Rho is essential for M. luteus
-
Nowatzke, W.L., Keller, E., Koch, G., and Richardson, J.P. (1997a) Transcription termination factor Rho is essential for M. luteus. J Bacteriol 179: 5238-5240.
-
(1997)
J Bacteriol
, vol.179
, pp. 5238-5240
-
-
Nowatzke, W.L.1
Keller, E.2
Koch, G.3
Richardson, J.P.4
-
31
-
-
0031018527
-
Function of the novel subdomain in the RNA binding domain of transcription termination factor Rho from M. luteus
-
Nowatzke, W.L., Burns, C.M., and Richardson, J.P. (1997b) Function of the novel subdomain in the RNA binding domain of transcription termination factor Rho from M. luteus. J Biol Chem 272: 2207-2211.
-
(1997)
J Biol Chem
, vol.272
, pp. 2207-2211
-
-
Nowatzke, W.L.1
Burns, C.M.2
Richardson, J.P.3
-
32
-
-
0028128864
-
Phylogenetic analysis of sequences from diverse bacteria with homology to the E. coli rho gene
-
Opperman, T., and Richardson, J.P. (1994) Phylogenetic analysis of sequences from diverse bacteria with homology to the E. coli rho gene. J Bacteriol 176: 5033-5043.
-
(1994)
J Bacteriol
, vol.176
, pp. 5033-5043
-
-
Opperman, T.1
Richardson, J.P.2
-
33
-
-
0028826041
-
Bicyclomycin and dihydrobicyclomycin inhibition kinetics of E. coli Rho-dependent transcription
-
Park, H., Zhang, X., Moon, H., Zwiefka, A., and Cox, K. (1995) Bicyclomycin and dihydrobicyclomycin inhibition kinetics of E. coli Rho-dependent transcription. Arch Biochem Biophys 323: 447-454.
-
(1995)
Arch Biochem Biophys
, vol.323
, pp. 447-454
-
-
Park, H.1
Zhang, X.2
Moon, H.3
Zwiefka, A.4
Cox, K.5
-
34
-
-
0028223611
-
Rho and RNA - Models for recognition and response
-
Platt, T. (1994) Rho and RNA - models for recognition and response. Mol Microbiol 11: 983-990.
-
(1994)
Mol Microbiol
, vol.11
, pp. 983-990
-
-
Platt, T.1
-
35
-
-
0028937429
-
Cloning, nucleotide sequence and transcriptional analysis of the nusG gene of S. coelicolor A3(2)
-
Puttikhunt, C., Nihara, T., and Yamada, Y. (1995) Cloning, nucleotide sequence and transcriptional analysis of the nusG gene of S. coelicolor A3(2). Mol Gen Genet 247: 118-122.
-
(1995)
Mol Gen Genet
, vol.247
, pp. 118-122
-
-
Puttikhunt, C.1
Nihara, T.2
Yamada, Y.3
-
36
-
-
0027457186
-
Identification of a putative B. subtilis Rho gene
-
Quirk, P.G., Dunkley, E.A., Lee, P., and Krulwich, T.A. (1993) Identification of a putative B. subtilis Rho gene. J Bacteriol 175: 647-654.
-
(1993)
J Bacteriol
, vol.175
, pp. 647-654
-
-
Quirk, P.G.1
Dunkley, E.A.2
Lee, P.3
Krulwich, T.A.4
-
37
-
-
0026035521
-
Preventing the synthesis of unused transcripts by Rho
-
Richardson, J.P. (1991) Preventing the synthesis of unused transcripts by Rho. Cell 64: 1047-1051.
-
(1991)
Cell
, vol.64
, pp. 1047-1051
-
-
Richardson, J.P.1
-
38
-
-
0029831394
-
Rho-Dependent termination of transcription is governed primarily by the upstream Rho-utilization (Rut) sequences of a terminator
-
Richardson, L.V., and Richardson, J.P. (1996) Rho-Dependent termination of transcription is governed primarily by the upstream Rho-utilization (Rut) sequences of a terminator. J Biol Chem 271: 21597-21603.
-
(1996)
J Biol Chem
, vol.271
, pp. 21597-21603
-
-
Richardson, L.V.1
Richardson, J.P.2
-
39
-
-
0004136246
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Sambrook, J., Fritsch, E.F., and Maniatis, T., eds. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
40
-
-
0021739701
-
Binding of rho factor to E. coli RNA polymerase mediated by nusA protein
-
Schmidt, M.C., and Chamberlin, M.J. (1984) Binding of rho factor to E. coli RNA polymerase mediated by nusA protein. J Biol Chem 259: 15000-15002.
-
(1984)
J Biol Chem
, vol.259
, pp. 15000-15002
-
-
Schmidt, M.C.1
Chamberlin, M.J.2
-
41
-
-
0022445885
-
Construction of a single-copy integration vector and its use in analysis of regulation of the trp operon in B. subtilis
-
Shimotsu, H., and Henner, D.J. (1986) Construction of a single-copy integration vector and its use in analysis of regulation of the trp operon in B. subtilis. Gene 43: 85-94.
-
(1986)
Gene
, vol.43
, pp. 85-94
-
-
Shimotsu, H.1
Henner, D.J.2
-
42
-
-
15644383855
-
Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: Functional analysis and comparative genomics
-
Smith, D.R., Doucette-Stamm, L.A., Deloughery, C., Lee, H.M., Dubois, J., Aldredge, T., et al. (1997) Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: functional analysis and comparative genomics. J Bacteriol 179: 7135-7155.
-
(1997)
J Bacteriol
, vol.179
, pp. 7135-7155
-
-
Smith, D.R.1
Doucette-Stamm, L.A.2
Deloughery, C.3
Lee, H.M.4
Dubois, J.5
Aldredge, T.6
-
43
-
-
0031574910
-
Effects on mRNA degradation by E. coli transcription termination factor Rho and pBR322 copy number control protein Rop
-
Sozhamannan, S., and Stitt, B.L. (1997) Effects on mRNA degradation by E. coli transcription termination factor Rho and pBR322 copy number control protein Rop. J Mol Biol 268: 689-700.
-
(1997)
J Mol Biol
, vol.268
, pp. 689-700
-
-
Sozhamannan, S.1
Stitt, B.L.2
-
44
-
-
0026527997
-
Requirement for E. coli NusG protein in factor-dependent transcription termination
-
Sullivan, S.L., and Gottesman, M.E. (1992) Requirement for E. coli NusG protein in factor-dependent transcription termination. Cell 68: 989-994.
-
(1992)
Cell
, vol.68
, pp. 989-994
-
-
Sullivan, S.L.1
Gottesman, M.E.2
-
45
-
-
0026671638
-
Insertional disruption of the nusB (ssyb) gene leads to cold-sensitive growth of Escherichia coli and suppression of the secy24 mutation
-
Taura, T., Ueguchi, C., Shiba, K., and Ito, K. (1992) Insertional disruption of the nusB (ssyb) gene leads to cold-sensitive growth of Escherichia coli and suppression of the secy24 mutation. Mol Gen Genet 234: 429-432.
-
(1992)
Mol Gen Genet
, vol.234
, pp. 429-432
-
-
Taura, T.1
Ueguchi, C.2
Shiba, K.3
Ito, K.4
-
46
-
-
0030979021
-
NusA is required for ribosomal antitermination and for modulation of the transcription elongation rate of both antiterminated RNA and mRNA
-
Vogel and Jensen, F. (1997) NusA is required for ribosomal antitermination and for modulation of the transcription elongation rate of both antiterminated RNA and mRNA. J Biol Chem 272: 12265-12271.
-
(1997)
J Biol Chem
, vol.272
, pp. 12265-12271
-
-
Vogel1
Jensen, F.2
-
47
-
-
0030848285
-
Kinetics of the RNA-DNA helicase activity of E. coli transcription termination factor Rho. 2. Processivity, ATP consumption and RNA binding
-
Walstrom, K.M., Dozono, J.M., and von Hippel, P.H. (1997) Kinetics of the RNA-DNA helicase activity of E. coli transcription termination factor Rho. 2. Processivity, ATP consumption and RNA binding. Biochemistry 36: 7993-8004.
-
(1997)
Biochemistry
, vol.36
, pp. 7993-8004
-
-
Walstrom, K.M.1
Dozono, J.M.2
Von Hippel, P.H.3
-
48
-
-
0030002447
-
Properties of a B. subtilis polynucleotide phosphorylase deletion strain
-
Wang, W., and Bechhofer, D.H. (1996) Properties of a B. subtilis polynucleotide phosphorylase deletion strain. J Bacteriol 178: 2375-2382.
-
(1996)
J Bacteriol
, vol.178
, pp. 2375-2382
-
-
Wang, W.1
Bechhofer, D.H.2
-
49
-
-
0001323636
-
Transcript elongation and termination in E. coli and S. typhimurium
-
Neidhardt, F.C., Ingraham, J.L., Low, K.B., Magasanik, B., Schechter, M., and Umbarger, H.E. (eds). New York: American Society for Microbiology Press
-
Yager, T.D., and von Hippel, P.H. (1987) Transcript elongation and termination in E. coli and S. typhimurium. In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. Neidhardt, F.C., Ingraham, J.L., Low, K.B., Magasanik, B., Schechter, M., and Umbarger, H.E. (eds). New York: American Society for Microbiology Press, pp. 1241-1274.
-
(1987)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
, pp. 1241-1274
-
-
Yager, T.D.1
Von Hippel, P.H.2
-
50
-
-
0028108756
-
Reduced Rho dependent termination permits NusA independent growth of E. coli
-
Zheng, C.H., and Friedman, D.I. (1994) Reduced Rho dependent termination permits NusA independent growth of E. coli. Proc Natl Acad Sci USA 91: 7543-7547.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 7543-7547
-
-
Zheng, C.H.1
Friedman, D.I.2
|