-
1
-
-
0033019056
-
Identification of a new Pyk2 target protein with Arf-GAP activity
-
Andreev J, Simon JP, Sabatini DD, Kam J, Plowman G, Randazzo PA, Schlessinger J (1999) Identification of a new Pyk2 target protein with Arf-GAP activity. Mol Cell Biol 19(3):2338-2350
-
(1999)
Mol Cell Biol
, vol.19
, Issue.3
, pp. 2338-2350
-
-
Andreev, J.1
Simon, J.P.2
Sabatini, D.D.3
Kam, J.4
Plowman, G.5
Randazzo, P.A.6
Schlessinger, J.7
-
2
-
-
84934443216
-
Radiation treatment effects on the proteome of the tumour microenvironment
-
10.1007/978-94-007-5896-4-3 10.1007/978-94-007-5896-4-3
-
Atkinson MJ (2013) Radiation treatment effects on the proteome of the tumour microenvironment. Adv Exp Med Biol 990:49-60. doi: 10.1007/978-94-007- 5896-4-3
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 49-60
-
-
Atkinson, M.J.1
-
3
-
-
77956327955
-
Formalin-fixed paraffin-embedded (FFPE) proteome analysis using gel-free and gel-based proteomics
-
10.1021/pr1004168 10.1021/pr1004168
-
Azimzadeh O, Barjaktarovic Z, Aubele M, Calzada-Wack J, Sarioglu H, Atkinson MJ, Tapio S (2010) Formalin-fixed paraffin-embedded (FFPE) proteome analysis using gel-free and gel-based proteomics. J Proteome Res 9(9):4710-4720. doi: 10.1021/pr1004168
-
(2010)
J Proteome Res
, vol.9
, Issue.9
, pp. 4710-4720
-
-
Azimzadeh, O.1
Barjaktarovic, Z.2
Aubele, M.3
Calzada-Wack, J.4
Sarioglu, H.5
Atkinson, M.J.6
Tapio, S.7
-
4
-
-
79960820563
-
Rapid proteomic remodeling of cardiac tissue caused by total body ionizing radiation
-
10.1002/pmic.201100178 10.1002/pmic.201100178
-
Azimzadeh O, Scherthan H, Sarioglu H, Barjaktarovic Z, Conrad M, Vogt A, Calzada-Wack J, Neff F, Aubele M, Buske C, Atkinson MJ, Tapio S (2011) Rapid proteomic remodeling of cardiac tissue caused by total body ionizing radiation. Proteomics 11(16):3299-3311. doi: 10.1002/pmic.201100178
-
(2011)
Proteomics
, vol.11
, Issue.16
, pp. 3299-3311
-
-
Azimzadeh, O.1
Scherthan, H.2
Sarioglu, H.3
Barjaktarovic, Z.4
Conrad, M.5
Vogt, A.6
Calzada-Wack, J.7
Neff, F.8
Aubele, M.9
Buske, C.10
Atkinson, M.J.11
Tapio, S.12
-
5
-
-
84859270363
-
Label-free protein profiling of formalin-fixed paraffin-embedded (FFPE) heart tissue reveals immediate mitochondrial impairment after ionising radiation
-
10.1016/j.jprot.2012.02.019 10.1016/j.jprot.2012.02.019
-
Azimzadeh O, Scherthan H, Yentrapalli R, Barjaktarovic Z, Ueffing M, Conrad M, Neff F, Calzada-Wack J, Aubele M, Buske C, Atkinson MJ, Hauck SM, Tapio S (2012) Label-free protein profiling of formalin-fixed paraffin-embedded (FFPE) heart tissue reveals immediate mitochondrial impairment after ionising radiation. J Proteomics 75(8):2384-2395. doi: 10.1016/j.jprot.2012.02.019
-
(2012)
J Proteomics
, vol.75
, Issue.8
, pp. 2384-2395
-
-
Azimzadeh, O.1
Scherthan, H.2
Yentrapalli, R.3
Barjaktarovic, Z.4
Ueffing, M.5
Conrad, M.6
Neff, F.7
Calzada-Wack, J.8
Aubele, M.9
Buske, C.10
Atkinson, M.J.11
Hauck, S.M.12
Tapio, S.13
-
6
-
-
84879354970
-
PPAR alpha: A novel radiation target in locally exposed Mus musculus heart revealed by quantitative proteomics
-
10.1021/pr400071g
-
Azimzadeh O, Sievert W, Sarioglu H, Yentrapalli R, Barjaktarovic Z, Sriharshan A, Ueffing M, Janik D, Aichler M, Atkinson M, Multhoff G, Tapio S (2013) PPAR alpha: a novel radiation target in locally exposed Mus musculus heart revealed by quantitative proteomics. J Proteome Res. doi: 10.1021/pr400071g
-
(2013)
J Proteome Res
-
-
Azimzadeh, O.1
Sievert, W.2
Sarioglu, H.3
Yentrapalli, R.4
Barjaktarovic, Z.5
Sriharshan, A.6
Ueffing, M.7
Janik, D.8
Aichler, M.9
Atkinson, M.10
Multhoff, G.11
Tapio, S.12
-
7
-
-
84867483822
-
Ionizing radiation-induced metabolic oxidative stress and prolonged cell injury
-
10.1016/j.canlet.2011.12.012 10.1016/j.canlet.2011.12.012
-
Azzam EI, Jay-Gerin JP, Pain D (2012) Ionizing radiation-induced metabolic oxidative stress and prolonged cell injury. Cancer Lett 327(1-2):48-60. doi: 10.1016/j.canlet.2011.12.012
-
(2012)
Cancer Lett
, vol.327
, Issue.1-2
, pp. 48-60
-
-
Azzam, E.I.1
Jay-Gerin, J.P.2
Pain, D.3
-
8
-
-
28844509735
-
Gel-based versus gel-free proteomics: A review
-
10.2174/138620705774962490
-
Baggerman G, Vierstraete E, De Loof A, Schoofs L (2005) Gel-based versus gel-free proteomics: a review. Comb Chem High Throughput Screen 8(8):669-677
-
(2005)
Comb Chem High Throughput Screen
, vol.8
, Issue.8
, pp. 669-677
-
-
Baggerman, G.1
Vierstraete, E.2
De Loof, A.3
Schoofs, L.4
-
9
-
-
82955241393
-
Radiation-induced signaling results in mitochondrial impairment in mouse heart at 4 weeks after exposure to X-rays
-
10.1371/journal.pone.0027811 2011PLoSO.627811B 10.1371/journal.pone. 0027811
-
Barjaktarovic Z, Schmaltz D, Shyla A, Azimzadeh O, Schulz S, Haagen J, Dorr W, Sarioglu H, Schafer A, Atkinson MJ, Zischka H, Tapio S (2011) Radiation-induced signaling results in mitochondrial impairment in mouse heart at 4 weeks after exposure to X-rays. PLoS ONE 6(12):e27811. doi: 10.1371/journal.pone.0027811
-
(2011)
PLoS ONE
, vol.6
, Issue.12
, pp. 27811
-
-
Barjaktarovic, Z.1
Schmaltz, D.2
Shyla, A.3
Azimzadeh, O.4
Schulz, S.5
Haagen, J.6
Dorr, W.7
Sarioglu, H.8
Schafer, A.9
Atkinson, M.J.10
Zischka, H.11
Tapio, S.12
-
10
-
-
84874389322
-
Integrative proteomic and microRNA analysis of primary human coronary artery endothelial cells exposed to low-dose gamma radiation
-
10.1007/s00411-012-0439-4 10.1007/s00411-012-0439-4
-
Barjaktarovic Z, Anastasov N, Azimzadeh O, Sriharshan A, Sarioglu H, Ueffing M, Tammio H, Hakanen A, Leszczynski D, Atkinson MJ, Tapio S (2013a) Integrative proteomic and microRNA analysis of primary human coronary artery endothelial cells exposed to low-dose gamma radiation. Radiat Environ Biophys 52(1):87-98. doi: 10.1007/s00411-012-0439-4
-
(2013)
Radiat Environ Biophys
, vol.52
, Issue.1
, pp. 87-98
-
-
Barjaktarovic, Z.1
Anastasov, N.2
Azimzadeh, O.3
Sriharshan, A.4
Sarioglu, H.5
Ueffing, M.6
Tammio, H.7
Hakanen, A.8
Leszczynski, D.9
Atkinson, M.J.10
Tapio, S.11
-
11
-
-
84876145300
-
Ionising radiation induces persistent alterations in the cardiac mitochondrial function of C57BL/6 mice 40 weeks after local heart exposure
-
10.1016/j.radonc.2013.01.017 10.1016/j.radonc.2013.01.017
-
Barjaktarovic Z, Shyla A, Azimzadeh O, Schulz S, Haagen J, Dorr W, Sarioglu H, Atkinson MJ, Zischka H, Tapio S (2013b) Ionising radiation induces persistent alterations in the cardiac mitochondrial function of C57BL/6 mice 40 weeks after local heart exposure. Radiother Oncol J Eur Soc Therapeutic Radiol Oncol 106(3):404-410. doi: 10.1016/j.radonc.2013.01.017
-
(2013)
Radiother Oncol J Eur Soc Therapeutic Radiol Oncol
, vol.106
, Issue.3
, pp. 404-410
-
-
Barjaktarovic, Z.1
Shyla, A.2
Azimzadeh, O.3
Schulz, S.4
Haagen, J.5
Dorr, W.6
Sarioglu, H.7
Atkinson, M.J.8
Zischka, H.9
Tapio, S.10
-
12
-
-
0019940244
-
Changes in serum amylase and its isoenzymes after whole body irradiation
-
10.1136/bmj.285.6336.170
-
Barrett A, Jacobs A, Kohn J, Raymond J, Powles RL (1982) Changes in serum amylase and its isoenzymes after whole body irradiation. Br Med J (Clin Res Ed) 285(6336):170-171
-
(1982)
Br Med J (Clin Res Ed)
, vol.285
, Issue.6336
, pp. 170-171
-
-
Barrett, A.1
Jacobs, A.2
Kohn, J.3
Raymond, J.4
Powles, R.L.5
-
13
-
-
84907111815
-
Plasma amylase activity as a biochemical indicator of radiation injury to salivary glands
-
10.3109/02841868409135978
-
Becciolini A, Giannardi G, Cionini L, Porciani S, Fallai C, Pirtoli L (1984) Plasma amylase activity as a biochemical indicator of radiation injury to salivary glands. Acta Radiol Oncol 23(1):9-14
-
(1984)
Acta Radiol Oncol
, vol.23
, Issue.1
, pp. 9-14
-
-
Becciolini, A.1
Giannardi, G.2
Cionini, L.3
Porciani, S.4
Fallai, C.5
Pirtoli, L.6
-
14
-
-
84860325854
-
Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response
-
10.1016/j.molcel.2012.01.026 10.1016/j.molcel.2012.01.026
-
Beli P, Lukashchuk N, Wagner SA, Weinert BT, Olsen JV, Baskcomb L, Mann M, Jackson SP, Choudhary C (2012) Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response. Mol Cell 46(2):212-225. doi: 10.1016/j.molcel.2012.01.026
-
(2012)
Mol Cell
, vol.46
, Issue.2
, pp. 212-225
-
-
Beli, P.1
Lukashchuk, N.2
Wagner, S.A.3
Weinert, B.T.4
Olsen, J.V.5
Baskcomb, L.6
Mann, M.7
Jackson, S.P.8
Choudhary, C.9
-
15
-
-
17844370789
-
Level of Flt3-ligand in plasma: A possible new bio-indicator for radiation-induced aplasia
-
10.1080/09553000110043711 10.1080/09553000110043711
-
Bertho JM, Demarquay C, Frick J, Joubert C, Arenales S, Jacquet N, Sorokine-Durm I, Chau Q, Lopez M, Aigueperse J, Gorin NC, Gourmelon P (2001) Level of Flt3-ligand in plasma: a possible new bio-indicator for radiation-induced aplasia. Int J Radiat Biol 77(6):703-712. doi: 10.1080/09553000110043711
-
(2001)
Int J Radiat Biol
, vol.77
, Issue.6
, pp. 703-712
-
-
Bertho, J.M.1
Demarquay, C.2
Frick, J.3
Joubert, C.4
Arenales, S.5
Jacquet, N.6
Sorokine-Durm, I.7
Chau, Q.8
Lopez, M.9
Aigueperse, J.10
Gorin, N.C.11
Gourmelon, P.12
-
16
-
-
0037337310
-
A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling
-
10.1038/nbt790 10.1038/nbt790
-
Blagoev B, Kratchmarova I, Ong SE, Nielsen M, Foster LJ, Mann M (2003) A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling. Nat Biotechnol 21(3):315-318. doi: 10.1038/nbt790
-
(2003)
Nat Biotechnol
, vol.21
, Issue.3
, pp. 315-318
-
-
Blagoev, B.1
Kratchmarova, I.2
Ong, S.E.3
Nielsen, M.4
Foster, L.J.5
Mann, M.6
-
17
-
-
84874046869
-
Alteration of the serum N-glycome of mice locally exposed to high doses of ionizing radiation
-
10.1074/mcp.M111.014639 10.1074/mcp.M111.014639
-
Chaze T, Slomianny MC, Milliat F, Tarlet G, Lefebvre-Darroman T, Gourmelon P, Bey E, Benderitter M, Michalski JC, Guipaud O (2013) Alteration of the serum N-glycome of mice locally exposed to high doses of ionizing radiation. Mol Cell Proteomics 12(2):283-301. doi: 10.1074/mcp.M111.014639
-
(2013)
Mol Cell Proteomics
, vol.12
, Issue.2
, pp. 283-301
-
-
Chaze, T.1
Slomianny, M.C.2
Milliat, F.3
Tarlet, G.4
Lefebvre-Darroman, T.5
Gourmelon, P.6
Bey, E.7
Benderitter, M.8
Michalski, J.C.9
Guipaud, O.10
-
18
-
-
84934438797
-
Global protein expression in response to extremely low frequency magnetic fields
-
10.1007/978-94-007-5896-4-7 10.1007/978-94-007-5896-4-7
-
Chen G, Xu Z (2013) Global protein expression in response to extremely low frequency magnetic fields. Adv Exp Med Biol 990:107-110. doi: 10.1007/978-94-007-5896-4-7
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 107-110
-
-
Chen, G.1
Xu, Z.2
-
19
-
-
84875458403
-
Charity begins at home: Non-coding RNA functions in DNA repair
-
10.1038/nrm3523 10.1038/nrm3523
-
Chowdhury D, Choi YE, Brault ME (2013) Charity begins at home: non-coding RNA functions in DNA repair. Nat Rev Mol Cell Biol 14(3):181-189. doi: 10.1038/nrm3523
-
(2013)
Nat Rev Mol Cell Biol
, vol.14
, Issue.3
, pp. 181-189
-
-
Chowdhury, D.1
Choi, Y.E.2
Brault, M.E.3
-
20
-
-
0034464238
-
Postabsorptive plasma citrulline concentration is a marker of absorptive enterocyte mass and intestinal failure in humans
-
10.1053/gast.2000.20227
-
Crenn P, Coudray-Lucas C, Thuillier F, Cynober L, Messing B (2000) Postabsorptive plasma citrulline concentration is a marker of absorptive enterocyte mass and intestinal failure in humans. Gastroenterology 119(6):1496-1505
-
(2000)
Gastroenterology
, vol.119
, Issue.6
, pp. 1496-1505
-
-
Crenn, P.1
Coudray-Lucas, C.2
Thuillier, F.3
Cynober, L.4
Messing, B.5
-
21
-
-
0037622076
-
Plasma citrulline: A marker of enterocyte mass in villous atrophy-associated small bowel disease
-
10.1016/S0016-5085(03)00170-7
-
Crenn P, Vahedi K, Lavergne-Slove A, Cynober L, Matuchansky C, Messing B (2003) Plasma citrulline: a marker of enterocyte mass in villous atrophy-associated small bowel disease. Gastroenterology 124(5):1210-1219
-
(2003)
Gastroenterology
, vol.124
, Issue.5
, pp. 1210-1219
-
-
Crenn, P.1
Vahedi, K.2
Lavergne-Slove, A.3
Cynober, L.4
Matuchansky, C.5
Messing, B.6
-
22
-
-
84860327482
-
DNA damage response: Multilevel proteomics gains momentum
-
10.1016/j.molcel.2012.04.011 10.1016/j.molcel.2012.04.011
-
Daub H (2012) DNA damage response: multilevel proteomics gains momentum. Mol Cell 46(2):113-114. doi: 10.1016/j.molcel.2012.04.011
-
(2012)
Mol Cell
, vol.46
, Issue.2
, pp. 113-114
-
-
Daub, H.1
-
23
-
-
84868691650
-
Brain proteome response following whole body exposure of mice to mobile phone or wireless DECT base radiation
-
10.3109/15368378.2011.631068 10.3109/15368378.2011.631068
-
Fragopoulou AF, Samara A, Antonelou MH, Xanthopoulou A, Papadopoulou A, Vougas K, Koutsogiannopoulou E, Anastasiadou E, Stravopodis DJ, Tsangaris GT, Margaritis LH (2012) Brain proteome response following whole body exposure of mice to mobile phone or wireless DECT base radiation. Electromagn Biol Med 31(4):250-274. doi: 10.3109/15368378.2011.631068
-
(2012)
Electromagn Biol Med
, vol.31
, Issue.4
, pp. 250-274
-
-
Fragopoulou, A.F.1
Samara, A.2
Antonelou, M.H.3
Xanthopoulou, A.4
Papadopoulou, A.5
Vougas, K.6
Koutsogiannopoulou, E.7
Anastasiadou, E.8
Stravopodis, D.J.9
Tsangaris, G.T.10
Margaritis, L.H.11
-
24
-
-
84934435364
-
Serum and plasma proteomics and its possible use as detector and predictor of radiation diseases
-
10.1007/978-94-007-5896-4-4 10.1007/978-94-007-5896-4-4
-
Guipaud O (2013) Serum and plasma proteomics and its possible use as detector and predictor of radiation diseases. Adv Exp Med Biol 990:61-86. doi: 10.1007/978-94-007-5896-4-4
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 61-86
-
-
Guipaud, O.1
-
25
-
-
36048953086
-
Time-course analysis of mouse serum proteome changes following exposure of the skin to ionizing radiation
-
10.1002/pmic.200601032
-
Guipaud O, Holler V, Buard V, Tarlet G, Royer N, Vinh J, Benderitter M (2007) Time-course analysis of mouse serum proteome changes following exposure of the skin to ionizing radiation. Proteomics 7(21):3992-4002
-
(2007)
Proteomics
, vol.7
, Issue.21
, pp. 3992-4002
-
-
Guipaud, O.1
Holler, V.2
Buard, V.3
Tarlet, G.4
Royer, N.5
Vinh, J.6
Benderitter, M.7
-
26
-
-
34548324770
-
Serum and plasma proteomics
-
10.1021/cr068287r 10.1021/cr068287r
-
Issaq HJ, Xiao Z, Veenstra TD (2007) Serum and plasma proteomics. Chem Rev 107(8):3601-3620. doi: 10.1021/cr068287r
-
(2007)
Chem Rev
, vol.107
, Issue.8
, pp. 3601-3620
-
-
Issaq, H.J.1
Xiao, Z.2
Veenstra, T.D.3
-
27
-
-
80155141140
-
MicroRNA-mediated processes are essential for the cellular radiation response
-
10.1667/RR2638.1
-
Kraemer A, Anastasov N, Angermeier M, Winkler K, Atkinson MJ, Moertl S (2011) MicroRNA-mediated processes are essential for the cellular radiation response. Radiat Res 176(5):575-586
-
(2011)
Radiat Res
, vol.176
, Issue.5
, pp. 575-586
-
-
Kraemer, A.1
Anastasov, N.2
Angermeier, M.3
Winkler, K.4
Atkinson, M.J.5
Moertl, S.6
-
28
-
-
84874067857
-
Proteomic approaches to identify biomarkers predictive of radiotherapy outcomes
-
10.1586/epr.12.68 10.1586/epr.12.68
-
Lacombe J, Azria D, Mange A, Solassol J (2013) Proteomic approaches to identify biomarkers predictive of radiotherapy outcomes. Expert Rev Proteomics 10(1):33-42. doi: 10.1586/epr.12.68
-
(2013)
Expert Rev Proteomics
, vol.10
, Issue.1
, pp. 33-42
-
-
Lacombe, J.1
Azria, D.2
Mange, A.3
Solassol, J.4
-
29
-
-
84934441828
-
Effects of radiofrequency-modulated electromagnetic fields on proteome
-
10.1007/978-94-007-5896-4-6 10.1007/978-94-007-5896-4-6
-
Leszczynski D (2013a) Effects of radiofrequency-modulated electromagnetic fields on proteome. Adv Exp Med Biol 990:101-106. doi: 10.1007/978-94-007-5896- 4-6
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 101-106
-
-
Leszczynski, D.1
-
30
-
-
84896799662
-
Radiation proteomics: The effects of ionizing and non-ionizing radiation on cells and tissues
-
doi: 10.1007/978-94-007-5896-4
-
Leszczynski D (2013b) Radiation proteomics: the effects of ionizing and non-ionizing radiation on cells and tissues. Adv Exp Med Biol 990. doi: 10.1007/978-94-007-5896-4
-
(2013)
Adv Exp Med Biol
, vol.990
-
-
Leszczynski, D.1
-
31
-
-
79953062345
-
Proteomic identification of radiation response markers in mouse intestine and brain
-
10.1002/pmic.201000332 10.1002/pmic.201000332
-
Lim YB, Pyun BJ, Lee HJ, Jeon SR, Jin YB, Lee YS (2011) Proteomic identification of radiation response markers in mouse intestine and brain. Proteomics 11(7):1254-1263. doi: 10.1002/pmic.201000332
-
(2011)
Proteomics
, vol.11
, Issue.7
, pp. 1254-1263
-
-
Lim, Y.B.1
Pyun, B.J.2
Lee, H.J.3
Jeon, S.R.4
Jin, Y.B.5
Lee, Y.S.6
-
32
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
10.1021/ac0498563 10.1021/ac0498563
-
Liu H, Sadygov RG, Yates JR (2004) A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem 76(14):4193-4201. doi: 10.1021/ac0498563
-
(2004)
Anal Chem
, vol.76
, Issue.14
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates, J.R.3
-
33
-
-
77954284275
-
Low-dose radiation-induced responses: Focusing on epigenetic regulation
-
10.3109/09553001003734592 10.3109/09553001003734592
-
Ma S, Liu X, Jiao B, Yang Y (2010) Low-dose radiation-induced responses: focusing on epigenetic regulation. Int J Radiat Biol 86(7):517-528. doi: 10.3109/09553001003734592
-
(2010)
Int J Radiat Biol
, vol.86
, Issue.7
, pp. 517-528
-
-
Ma, S.1
Liu, X.2
Jiao, B.3
Yang, Y.4
-
34
-
-
0037338365
-
Proteomic analysis of post-translational modifications
-
10.1038/nbt0303-255 10.1038/nbt0303-255
-
Mann M, Jensen ON (2003) Proteomic analysis of post-translational modifications. Nat Biotechnol 21(3):255-261. doi: 10.1038/nbt0303-255
-
(2003)
Nat Biotechnol
, vol.21
, Issue.3
, pp. 255-261
-
-
Mann, M.1
Jensen, O.N.2
-
35
-
-
84876163688
-
Epigenetics in radiation biology: A new research frontier
-
10.3389/fgene.2013.00040 10.3389/fgene.2013.00040
-
Merrifield M, Kovalchuk O (2013) Epigenetics in radiation biology: a new research frontier. Frontiers in genetics 4:40. doi: 10.3389/fgene.2013.00040
-
(2013)
Frontiers in Genetics
, vol.4
, pp. 40
-
-
Merrifield, M.1
Kovalchuk, O.2
-
36
-
-
44849119147
-
Profiling mitochondrial proteins in radiation-induced genome-unstable cell lines with persistent oxidative stress by mass spectrometry
-
10.1667/rr1186.1 10.1667/RR1186.1
-
Miller JH, Jin S, Morgan WF, Yang A, Wan Y, Aypar U, Peters JS, Springer DL (2008) Profiling mitochondrial proteins in radiation-induced genome-unstable cell lines with persistent oxidative stress by mass spectrometry. Radiat Res 169(6):700-706. doi: 10.1667/rr1186.1
-
(2008)
Radiat Res
, vol.169
, Issue.6
, pp. 700-706
-
-
Miller, J.H.1
Jin, S.2
Morgan, W.F.3
Yang, A.4
Wan, Y.5
Aypar, U.6
Peters, J.S.7
Springer, D.L.8
-
37
-
-
84934438189
-
Ultraviolet radiation effects on the proteome of skin cells
-
10.1007/978-94-007-5896-4-8 10.1007/978-94-007-5896-4-8
-
Muller HK, Woods GM (2013) Ultraviolet radiation effects on the proteome of skin cells. Adv Exp Med Biol 990:111-119. doi: 10.1007/978-94-007-5896-4-8
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 111-119
-
-
Muller, H.K.1
Woods, G.M.2
-
38
-
-
0016711037
-
High resolution two-dimensional electrophoresis of proteins
-
O'Farrell PH (1975) High resolution two-dimensional electrophoresis of proteins. J Biol Chem 250(10):4007-4021
-
(1975)
J Biol Chem
, vol.250
, Issue.10
, pp. 4007-4021
-
-
O'Farrell, P.H.1
-
39
-
-
79952389481
-
A bioinformatics approach for biomarker identification in radiation-induced lung inflammation from limited proteomics data
-
10.1021/pr101226q 10.1021/pr101226q
-
Oh JH, Craft JM, Townsend R, Deasy JO, Bradley JD, El Naqa I (2011) A bioinformatics approach for biomarker identification in radiation-induced lung inflammation from limited proteomics data. J Proteome Res 10(3):1406-1415. doi: 10.1021/pr101226q
-
(2011)
J Proteome Res
, vol.10
, Issue.3
, pp. 1406-1415
-
-
Oh, J.H.1
Craft, J.M.2
Townsend, R.3
Deasy, J.O.4
Bradley, J.D.5
El Naqa, I.6
-
40
-
-
27644543078
-
Comparison of label-free methods for quantifying human proteins by shotgun proteomics
-
10.1074/mcp.M500084-MCP200 10.1074/mcp.M500084-MCP200
-
Old WM, Meyer-Arendt K, Aveline-Wolf L, Pierce KG, Mendoza A, Sevinsky JR, Resing KA, Ahn NG (2005) Comparison of label-free methods for quantifying human proteins by shotgun proteomics. Mol Cell Proteomics 4(10):1487-1502. doi: 10.1074/mcp.M500084-MCP200
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.10
, pp. 1487-1502
-
-
Old, W.M.1
Meyer-Arendt, K.2
Aveline-Wolf, L.3
Pierce, K.G.4
Mendoza, A.5
Sevinsky, J.R.6
Resing, K.A.7
Ahn, N.G.8
-
41
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
10.1074/mcp.M200025-MCP200
-
Ong SE, Blagoev B, Kratchmarova I, Kristensen DB, Steen H, Pandey A, Mann M (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics 1(5):376-386
-
(2002)
Mol Cell Proteomics
, vol.1
, Issue.5
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
Kristensen, D.B.4
Steen, H.5
Pandey, A.6
Mann, M.7
-
42
-
-
79953295549
-
Loss of Dicer in Sertoli cells has a major impact on the testicular proteome of mice
-
10.1074/mcp.M900587-MCP200 10.1074/mcp.M900587-MCP200
-
Papaioannou MD, Lagarrigue M, Vejnar CE, Rolland AD, Kuhne F, Aubry F, Schaad O, Fort A, Descombes P, Neerman-Arbez M, Guillou F, Zdobnov EM, Pineau C, Nef S (2011) Loss of Dicer in Sertoli cells has a major impact on the testicular proteome of mice. Mol Cell Proteomics: MCP 10(4):M900587MCP900200. doi: 10.1074/mcp.M900587-MCP200
-
(2011)
Mol Cell Proteomics: MCP
, vol.10
, Issue.4
-
-
Papaioannou, M.D.1
Lagarrigue, M.2
Vejnar, C.E.3
Rolland, A.D.4
Kuhne, F.5
Aubry, F.6
Schaad, O.7
Fort, A.8
Descombes, P.9
Neerman-Arbez, M.10
Guillou, F.11
Zdobnov, E.M.12
Pineau, C.13
Nef, S.14
-
43
-
-
84934438791
-
Effects of ultraviolet radiation on skin cell proteome
-
10.1007/978-94-007-5896-4-9 10.1007/978-94-007-5896-4-9
-
Pastila R (2013) Effects of ultraviolet radiation on skin cell proteome. Adv Exp Med Biol 990:121-127. doi: 10.1007/978-94-007-5896-4-9
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 121-127
-
-
Pastila, R.1
-
44
-
-
84865634846
-
Ionizing radiation biomarkers for potential use in epidemiological studies
-
10.1016/j.mrrev.2012.05.003 10.1016/j.mrrev.2012.05.003
-
Pernot E, Hall J, Baatout S, Benotmane MA, Blanchardon E, Bouffler S, El Saghire H, Gomolka M, Guertler A, Harms-Ringdahl M, Jeggo P, Kreuzer M, Laurier D, Lindholm C, Mkacher R, Quintens R, Rothkamm K, Sabatier L, Tapio S, de Vathaire F, Cardis E (2012) Ionizing radiation biomarkers for potential use in epidemiological studies. Mutat Res 751(2):258-286. doi: 10.1016/j.mrrev.2012.05. 003
-
(2012)
Mutat Res
, vol.751
, Issue.2
, pp. 258-286
-
-
Pernot, E.1
Hall, J.2
Baatout, S.3
Benotmane, M.A.4
Blanchardon, E.5
Bouffler, S.6
El Saghire, H.7
Gomolka, M.8
Guertler, A.9
Harms-Ringdahl, M.10
Jeggo, P.11
Kreuzer, M.12
Laurier, D.13
Lindholm, C.14
Mkacher, R.15
Quintens, R.16
Rothkamm, K.17
Sabatier, L.18
Tapio, S.19
De Vathaire, F.20
Cardis, E.21
more..
-
45
-
-
79952445771
-
Low-dose irradiation causes rapid alterations to the proteome of the human endothelial cell line EA.hy926
-
10.1007/s00411-010-0342-9 10.1007/s00411-010-0342-9
-
Pluder F, Barjaktarovic Z, Azimzadeh O, Mortl S, Kramer A, Steininger S, Sarioglu H, Leszczynski D, Nylund R, Hakanen A, Sriharshan A, Atkinson MJ, Tapio S (2011) Low-dose irradiation causes rapid alterations to the proteome of the human endothelial cell line EA.hy926. Radiat Environ Biophys 50(1):155-166. doi: 10.1007/s00411-010-0342-9
-
(2011)
Radiat Environ Biophys
, vol.50
, Issue.1
, pp. 155-166
-
-
Pluder, F.1
Barjaktarovic, Z.2
Azimzadeh, O.3
Mortl, S.4
Kramer, A.5
Steininger, S.6
Sarioglu, H.7
Leszczynski, D.8
Nylund, R.9
Hakanen, A.10
Sriharshan, A.11
Atkinson, M.J.12
Tapio, S.13
-
46
-
-
84867101049
-
Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass
-
10.1038/ncb2579 10.1038/ncb2579
-
Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C (2012) Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. Nat Cell Biol 14(10):1089-1098. doi: 10.1038/ncb2579
-
(2012)
Nat Cell Biol
, vol.14
, Issue.10
, pp. 1089-1098
-
-
Povlsen, L.K.1
Beli, P.2
Wagner, S.A.3
Poulsen, S.L.4
Sylvestersen, K.B.5
Poulsen, J.W.6
Nielsen, M.L.7
Bekker-Jensen, S.8
Mailand, N.9
Choudhary, C.10
-
47
-
-
19944432197
-
Multiplexed protein quantitation in saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
10.1074/mcp.M400129-MCP200 10.1074/mcp.M400129-MCP200
-
Ross PL, Huang YN, Marchese JN, Williamson B, Parker K, Hattan S, Khainovski N, Pillai S, Dey S, Daniels S, Purkayastha S, Juhasz P, Martin S, Bartlet-Jones M, He F, Jacobson A, Pappin DJ (2004) Multiplexed protein quantitation in saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3(12):1154-1169. doi: 10.1074/mcp.M400129-MCP200
-
(2004)
Mol Cell Proteomics
, vol.3
, Issue.12
, pp. 1154-1169
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
Williamson, B.4
Parker, K.5
Hattan, S.6
Khainovski, N.7
Pillai, S.8
Dey, S.9
Daniels, S.10
Purkayastha, S.11
Juhasz, P.12
Martin, S.13
Bartlet-Jones, M.14
He, F.15
Jacobson, A.16
Pappin, D.J.17
-
48
-
-
33646252021
-
Quantitative analysis of 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced proteome alterations in 5L rat hepatoma cells using isotope-coded protein labels
-
10.1002/pmic.200500680
-
Sarioglu H, Brandner S, Jacobsen C, Meindl T, Schmidt A, Kellermann J, Lottspeich F, Andrae U (2006) Quantitative analysis of 2,3,7,8- tetrachlorodibenzo-p-dioxin-induced proteome alterations in 5L rat hepatoma cells using isotope-coded protein labels. Proteomics 6(8):2407-2421
-
(2006)
Proteomics
, vol.6
, Issue.8
, pp. 2407-2421
-
-
Sarioglu, H.1
Brandner, S.2
Jacobsen, C.3
Meindl, T.4
Schmidt, A.5
Kellermann, J.6
Lottspeich, F.7
Andrae, U.8
-
49
-
-
13244260803
-
A novel strategy for quantitative proteomics using isotope-coded protein labels
-
10.1002/pmic.200400873 10.1002/pmic.200400873
-
Schmidt A, Kellermann J, Lottspeich F (2005) A novel strategy for quantitative proteomics using isotope-coded protein labels. Proteomics 5(1):4-15. doi: 10.1002/pmic.200400873
-
(2005)
Proteomics
, vol.5
, Issue.1
, pp. 4-15
-
-
Schmidt, A.1
Kellermann, J.2
Lottspeich, F.3
-
50
-
-
78649896827
-
Archiving lessons from radiobiology
-
10.1038/468634a 2010Natur.468.634S 10.1038/468634a
-
Schofield PN, Tapio S, Grosche B (2010) Archiving lessons from radiobiology. Nature 468(7324):634. doi: 10.1038/468634a
-
(2010)
Nature
, vol.468
, Issue.7324
, pp. 634
-
-
Schofield, P.N.1
Tapio, S.2
Grosche, B.3
-
51
-
-
84934442852
-
The urine proteome as a radiation biodosimeter
-
10.1007/978-94-007-5896-4-5 10.1007/978-94-007-5896-4-5
-
Sharma M, Moulder JE (2013) The urine proteome as a radiation biodosimeter. Adv Exp Med Biol 990:87-100. doi: 10.1007/978-94-007-5896-4-5
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 87-100
-
-
Sharma, M.1
Moulder, J.E.2
-
52
-
-
84861871645
-
Low doses of gamma-radiation induce consistent protein expression changes in human leukocytes
-
10.1504/IJLR.2011.047188
-
Skiöld SBS, Auer G, Hellman U, Näslund I, Harms-Ringdahl M, Haghdoost S (2011) Low doses of gamma-radiation induce consistent protein expression changes in human leukocytes. Int J Low Radiat 8:374-387
-
(2011)
Int J Low Radiat
, vol.8
, pp. 374-387
-
-
Skiöld, S.B.S.1
Auer, G.2
Hellman, U.3
Näslund, I.4
Harms-Ringdahl, M.5
Haghdoost, S.6
-
53
-
-
84873378773
-
Proteomic changes in the rat brain induced by homogenous irradiation and by the bystander effect resulting from high energy synchrotron X-ray microbeams
-
10.3109/09553002.2013.732252 10.3109/09553002.2013.732252
-
Smith RW, Wang J, Schultke E, Seymour CB, Brauer-Krisch E, Laissue JA, Blattmann H, Mothersill CE (2013) Proteomic changes in the rat brain induced by homogenous irradiation and by the bystander effect resulting from high energy synchrotron X-ray microbeams. Int J Radiat Biol 89(2):118-127. doi: 10.3109/09553002.2013.732252
-
(2013)
Int J Radiat Biol
, vol.89
, Issue.2
, pp. 118-127
-
-
Smith, R.W.1
Wang, J.2
Schultke, E.3
Seymour, C.B.4
Brauer-Krisch, E.5
Laissue, J.A.6
Blattmann, H.7
Mothersill, C.E.8
-
54
-
-
84859268390
-
Proteomic analysis by SILAC and 2D-DIGE reveals radiation-induced endothelial response: Four key pathways
-
10.1016/j.jprot.2012.02.009 10.1016/j.jprot.2012.02.009
-
Sriharshan A, Boldt K, Sarioglu H, Barjaktarovic Z, Azimzadeh O, Hieber L, Zitzelsberger H, Ueffing M, Atkinson MJ, Tapio S (2012) Proteomic analysis by SILAC and 2D-DIGE reveals radiation-induced endothelial response: four key pathways. J Proteomics 75(8):2319-2330. doi: 10.1016/j.jprot.2012.02.009
-
(2012)
J Proteomics
, vol.75
, Issue.8
, pp. 2319-2330
-
-
Sriharshan, A.1
Boldt, K.2
Sarioglu, H.3
Barjaktarovic, Z.4
Azimzadeh, O.5
Hieber, L.6
Zitzelsberger, H.7
Ueffing, M.8
Atkinson, M.J.9
Tapio, S.10
-
55
-
-
84934442052
-
Ionizing radiation effects on cells, organelles and tissues on proteome level
-
10.1007/978-94-007-5896-4-2 10.1007/978-94-007-5896-4-2
-
Tapio S (2013) Ionizing radiation effects on cells, organelles and tissues on proteome level. Adv Exp Med Biol 990:37-48. doi: 10.1007/978-94-007- 5896-4-2
-
(2013)
Adv Exp Med Biol
, vol.990
, pp. 37-48
-
-
Tapio, S.1
-
56
-
-
73049114707
-
Use of proteomics in radiobiological research: Current state of the art
-
10.1007/s00411-009-0263-7
-
Tapio S, Hornhardt S, Gomolka M, Leszczynski D, Posch A, Thalhammer S, Atkinson MJ (2010) Use of proteomics in radiobiological research: current state of the art. Radiat Environ Biophys 49(1):1-4
-
(2010)
Radiat Environ Biophys
, vol.49
, Issue.1
, pp. 1-4
-
-
Tapio, S.1
Hornhardt, S.2
Gomolka, M.3
Leszczynski, D.4
Posch, A.5
Thalhammer, S.6
Atkinson, M.J.7
-
57
-
-
84864476436
-
Quantitative proteomic analysis of mitochondrial proteins reveals prosurvival mechanisms in the perpetuation of radiation-induced genomic instability
-
10.1016/j.freeradbiomed.2012.03.025 10.1016/j.freeradbiomed.2012.03.025
-
Thomas SN, Waters KM, Morgan WF, Yang AJ, Baulch JE (2012) Quantitative proteomic analysis of mitochondrial proteins reveals prosurvival mechanisms in the perpetuation of radiation-induced genomic instability. Free Radic Biol Med 53(3):618-628. doi: 10.1016/j.freeradbiomed.2012.03.025
-
(2012)
Free Radic Biol Med
, vol.53
, Issue.3
, pp. 618-628
-
-
Thomas, S.N.1
Waters, K.M.2
Morgan, W.F.3
Yang, A.J.4
Baulch, J.E.5
-
58
-
-
17844371703
-
Biomarkers: Mining the biofluid proteome
-
10.1074/mcp.M500006-MCP200 10.1074/mcp.M500006-MCP200
-
Veenstra TD, Conrads TP, Hood BL, Avellino AM, Ellenbogen RG, Morrison RS (2005) Biomarkers: mining the biofluid proteome. Mol Cell Proteomics 4(4):409-418. doi: 10.1074/mcp.M500006-MCP200
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.4
, pp. 409-418
-
-
Veenstra, T.D.1
Conrads, T.P.2
Hood, B.L.3
Avellino, A.M.4
Ellenbogen, R.G.5
Morrison, R.S.6
-
59
-
-
80054033461
-
A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles
-
10.1074/mcp.M111.013284 10.1074/mcp.M111.013284 013284
-
Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C (2011) A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. Mol Cell Proteomics 10(10):M111 013284. doi: 10.1074/mcp.M111.013284
-
(2011)
Mol Cell Proteomics
, vol.10
, Issue.10
, pp. 111
-
-
Wagner, S.A.1
Beli, P.2
Weinert, B.T.3
Nielsen, M.L.4
Cox, J.5
Mann, M.6
Choudhary, C.7
-
60
-
-
84867103151
-
Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues
-
10.1074/mcp.M112.017905 10.1074/mcp.M112.017905
-
Wagner SA, Beli P, Weinert BT, Scholz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C (2012) Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues. Mol Cell Proteomics 11(12):1578-1585. doi: 10.1074/mcp.M112.017905
-
(2012)
Mol Cell Proteomics
, vol.11
, Issue.12
, pp. 1578-1585
-
-
Wagner, S.A.1
Beli, P.2
Weinert, B.T.3
Scholz, C.4
Kelstrup, C.D.5
Young, C.6
Nielsen, M.L.7
Olsen, J.V.8
Brakebusch, C.9
Choudhary, C.10
-
61
-
-
84863012852
-
Identification of ERp29 as a biomarker for predicting nasopharyngeal carcinoma response to radiotherapy
-
10.3892/or.2011.1586
-
Wu P, Zhang H, Qi L, Tang Q, Tang Y, Xie Z, Lv Y, Zhao S, Jiang W (2012) Identification of ERp29 as a biomarker for predicting nasopharyngeal carcinoma response to radiotherapy. Oncol Rep 27(4):987-994. doi: 10.3892/or.2011.1586
-
(2012)
Oncol Rep
, vol.27
, Issue.4
, pp. 987-994
-
-
Wu, P.1
Zhang, H.2
Qi, L.3
Tang, Q.4
Tang, Y.5
Xie, Z.6
Lv, Y.7
Zhao, S.8
Jiang, W.9
-
62
-
-
84859919433
-
Quantitative phosphoproteomics identifies filaggrin and other targets of ionizing radiation in a human skin model
-
10.1111/j.1600-0625.2012.01470.x 10.1111/j.1600-0625.2012.01470.x
-
Yang F, Waters KM, Webb-Robertson BJ, Sowa MB, von Neubeck C, Aldrich JT, Markillie LM, Wirgau RM, Gritsenko MA, Zhao R, Camp DG 2nd, Smith RD, Stenoien DL (2012) Quantitative phosphoproteomics identifies filaggrin and other targets of ionizing radiation in a human skin model. Exp Dermatol 21(5):352-357. doi: 10.1111/j.1600-0625.2012.01470.x
-
(2012)
Exp Dermatol
, vol.21
, Issue.5
, pp. 352-357
-
-
Yang, F.1
Waters, K.M.2
Webb-Robertson, B.J.3
Sowa, M.B.4
Von Neubeck, C.5
Aldrich, J.T.6
Markillie, L.M.7
Wirgau, R.M.8
Gritsenko, M.A.9
Zhao, R.10
Camp, I.I.D.G.11
Smith, R.D.12
Stenoien, D.L.13
-
63
-
-
84875909224
-
Quantitative proteomic analysis reveals induction of premature senescence in human umbilical vein endothelial cells exposed to chronic low-dose rate gamma radiation
-
10.1002/pmic.201200463 10.1002/pmic.201200463
-
Yentrapalli R, Azimzadeh O, Barjaktarovic Z, Sarioglu H, Wojcik A, Harms-Ringdahl M, Atkinson MJ, Haghdoost S, Tapio S (2013) Quantitative proteomic analysis reveals induction of premature senescence in human umbilical vein endothelial cells exposed to chronic low-dose rate gamma radiation. Proteomics 13(7):1096-1107. doi: 10.1002/pmic.201200463
-
(2013)
Proteomics
, vol.13
, Issue.7
, pp. 1096-1107
-
-
Yentrapalli, R.1
Azimzadeh, O.2
Barjaktarovic, Z.3
Sarioglu, H.4
Wojcik, A.5
Harms-Ringdahl, M.6
Atkinson, M.J.7
Haghdoost, S.8
Tapio, S.9
-
64
-
-
70350247861
-
Modification-specific proteomics: Strategies for characterization of post-translational modifications using enrichment techniques
-
10.1002/pmic.200900398 10.1002/pmic.200900398
-
Zhao Y, Jensen ON (2009) Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques. Proteomics 9(20):4632-4641. doi: 10.1002/pmic.200900398
-
(2009)
Proteomics
, vol.9
, Issue.20
, pp. 4632-4641
-
-
Zhao, Y.1
Jensen, O.N.2
-
65
-
-
62349118232
-
Inflammation and chronic oxidative stress in radiation-induced late normal tissue injury: Therapeutic implications
-
10.2174/092986709787002790
-
Zhao W, Robbins ME (2009) Inflammation and chronic oxidative stress in radiation-induced late normal tissue injury: therapeutic implications. Curr Med Chem 16(2):130-143
-
(2009)
Curr Med Chem
, vol.16
, Issue.2
, pp. 130-143
-
-
Zhao, W.1
Robbins, M.E.2
-
66
-
-
74049115774
-
Mass spectrometry-based label-free quantitative proteomics
-
10.1155/2010/840518
-
Zhu W, Smith JW, Huang C-M (2010) Mass spectrometry-based label-free quantitative proteomics. J Biomed Biotechnol. doi: 10.1155/2010/840518
-
(2010)
J Biomed Biotechnol
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Zhu, W.1
Smith, J.W.2
Huang, C.-M.3
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