C60@Lysozyme: Direct observation by nuclear magnetic resonance of a 1:1 fullerene protein adduct

ACS Nano

Volumn 8, Issue 2, 2014, Pages 1871-1877

  Calvaresi, Matteo ^a   Arnesano, Fabio ^b   Bonacchi, Sara ^a   Bottoni, Andrea ^a   Calò, Vincenza ^b   Conte, Stefano ^a   Falini, Giuseppe ^a   Fermani, Simona ^a   Losacco, Maurizio ^b   Montalti, Marco ^a   Natile, Giovanni ^b   Prodi, Luca ^a   Sparla, Francesca ^a   Zerbetto, Francesco ^a  

^a UNIVERSITY OF BOLOGNA   (Italy)

^b UNIVERSITY OF BARI   (Italy)

Author keywords

carbon nanoparticles; fullerene; lysozyme; nanobiotechnology; NMR spectroscopy; protein nanoparticle interaction

Indexed keywords

FULLERENE C60; FULLERENE DERIVATIVE; LYSOZYME;

ARTICLE; CHEMISTRY; FLUORESCENCE; GEL CHROMATOGRAPHY; METHODOLOGY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; ULTRAVIOLET SPECTROPHOTOMETRY;

CHROMATOGRAPHY, GEL; FLUORESCENCE; FULLERENES; MAGNETIC RESONANCE SPECTROSCOPY; MURAMIDASE; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 84894622648     PISSN: 19360851     EISSN: 1936086X     Source Type: Journal    
DOI: 10.1021/nn4063374     Document Type: Article

References (46)

1. Calvaresi, M.; Zerbetto, F. The Devil and Holy Water: Proteins and Carbon Nanotubes Hybrids Acc. Chem. Res. 2013, 46, 2454-2463
2. Nepal, D.; Geckeler, K. E. pH-Sensitive Dispersion and Debundling of Single-Walled Carbon Nanotubes: Lysozyme as a Tool Small 2006, 2, 406-412
3. Nie, H.; Wang, H.; Cao, A.; Shi, Z.; Yang, S.-T.; Yuan, Y.; Liu, Y. Diameter-Selective Dispersion of Double-Walled Carbon Nanotubes by Lysozyme Nanoscale 2011, 3, 970-973
4. Choi, Y.; Moody, I. S.; Sims, P. C.; Hunt, S. R.; Corso, B. L.; Perez, I.; Weiss, G. A.; Collins, P. G. Single-Molecule Lysozyme Dynamics Monitored by an Electronic Circuit Science 2012, 335, 319-324
5. Da Ros, T.; Prato, M. Medicinal Chemistry with Fullerenes and Fullerene Derivatives Chem. Commun. 1999, 8, 663-669
6. Kostarelos, K.; Bianco, A.; Prato, M. Promises, Facts and Challenges for Carbon Nanotubes in Imaging and Therapeutics Nat. Nanotechnol. 2009, 4, 627-633
7. Grigoryan, G.; Kim, Y. H.; Acharya, R.; Axelrod, K.; Jain, R. M.; Willis, L.; Drndic, M.; Kikkawa, J. M.; DeGrado, W. F. Computational Design of Virus-like Protein Assemblies on Carbon Nanotube Surfaces Science 2011, 332, 1071-1076
8. Park, K. H.; Chhowalla, M.; Iqbal, Z.; Sesti, F. Single-Walled Carbon Nanotubes are a New Class of Ion Channel Blockers J. Biol. Chem. 2003, 278, 50212-50216
9. Zuo, G.; Kang, S.-G.; Xiu, P.; Zhao, Y.; Zhou, R. Interactions Between Proteins and Carbon-Based Nanoparticles: Exploring the Origin of Nanotoxicity at the Molecular Level Small 2013, 9, 1546-1556
10. 60 ACS Nano 2010, 4, 2283-2299
11. Friedman, S. H.; DeCamp, D. L.; Sijbesma, R.; Srdanov, G.; Wudl, F.; Kenyon, G. L. Inhibition of the HIV-1 Protease by Fullerene Derivatives: Model Building Studies and Experimental Verification J. Am. Chem. Soc. 1993, 115, 6506-6509
12. Tokuyama, H.; Yamago, S.; Nakamura, E.; Shiraki, T.; Sugiura, Y. Photoinduced Biochemical Activity of Fullerene Carboxylic Acid J. Am. Chem. Soc. 1993, 115, 7918-7919
13. 60 Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 12193-12197
14. Pastorin, G.; Marchesan, S.; Hoebeke, J.; Da Ros, T.; Ehret-Sabatier, L.; Briand, J.-P.; Prato, M.; Bianco, A. Design and Activity of Cationic Fullerene Derivatives as Inhibitors of Acetylcholinesterase Org. Biomol. Chem. 2006, 4, 2556-2562
15. 60] Fullerene Complex Bioconjugate Chem. 2005, 16, 1058-1062
16. 60-Fullerene and a Native Blood Protein ChemBioChem 2006, 7, 1783-1789
17. Yang, S.-T.; Wang, H.; Guo, L.; Gao, Y.; Liu, Y.; Cao, A. Interaction of Fullerenol with Lysozyme Investigated by Experimental and Computational Approaches Nanotechnology 2008, 19, 395101
18. Kim, J. E.; Lee, M. Fullerene Inhibits β-Amyloid Peptide Aggregation Biochem. Biophys. Res. Commun. 2003, 303, 576-579
19. 60-Fullerene Adducts Inhibit Neuronal Nitric Oxide Synthase by Acting as Highly Potent Calmodulin Antagonists Arch. Biochem. Biophys. 2002, 399, 130-141
20. Mashino, T.; Shimotohno, K.; Ikegami, N.; Nishikawa, D.; Okuda, K.; Takahashi, K.; Nakamura, S.; Mochizuki, M. Human Immunodeficiency Virus-Reverse Transcriptase Inhibition and Hepatitis C Virus RNA-Dependent RNA Polymerase Inhibition Activities of Fullerene Derivatives Bioorg. Med. Chem. Lett. 2005, 15, 1107-1109
21. Innocenti, A.; Durdagi, S.; Doostdar, N.; Strom, T. A.; Barron, A. R.; Supuran, C. T. Nanoscale Enzyme Inhibitors: Fullerenes Inhibit Carbonic Anhydrase by Occluding the Active Site Entrance Biorg. Med. Chem. 2010, 18, 2822-2828
22. 60 Neat Fullerenes with Membrane Proteins: A Computational Study on Potassium Channels ACS Nano 2010, 4, 4158-4164
23. Ratnikova, T. A.; Govindan, P. N.; Salonen, E.; Ke, P. C. In Vitro Polymerization of Microtubules with a Fullerene Derivative ACS Nano 2011, 5, 6306-6314
24. Wu, H.; Lin, L. N.; Wang, P.; Jiang, S. S.; Dai, Z.; Zou, X. Y. Solubilization of Pristine Fullerene by the Unfolding Mechanism of Bovine Serum Albumin for Cytotoxic Application Chem. Commun. 2011, 47, 10659-10661
25. Calvaresi, M.; Zerbetto, F. Fullerene Sorting Proteins Nanoscale 2011, 3, 2873-2881
26. 60 and Serum Albumins in Solution Nano. Res. Lett. 2012, 7, 433
27. Govindan, P. N.; Monticelli, L.; Salonen, E. Mechanism of Taq DNA Polymerase Inhibition by Fullerene Derivatives: Insight from Computer Simulations J. Phys. Chem. B 2012, 116, 10676-10683
28. 70 Fullerene with the Kv1.2 Potassium Channel Phys. Chem. Chem. Phys. 2012, 14, 12526-12533
29. 22 on WW Domain: Implication on Signal Transduction Pathway Sci. Rep. 2012, 2, 957
30. Mentovich, E.; Belgorodsky, B.; Gozin, M.; Richter, S.; Cohen, H. Doped Biomolecules in Miniaturized Electric Junctions J. Am. Chem. Soc. 2012, 134, 8468-8473
31. 22 and its implication for de Novo Design of Nanomedicine Proc. Natl. Acad. Sci. U.S.A. 2012, 109, 15431-15436
32. Durdagi, S.; Supuran, C. T.; Strom, T. A.; Doostdar, N.; Kumar, M. K.; Barron, A. R.; Mavromoustakos, T.; Papadopoulos, M. G. In Silico Drug Screening Approach for the Design of Magic Bullets: A Successful Example with Anti-HIV Fullerene Derivatized Amino Acids J. Chem. Inf. Model. 2009, 49, 1139-1143
33. Pellecchia, M.; Sem, D. S.; Wuthrich, K. NMR in Drug Discovery Nat. Rev. Drug Discovery 2002, 1, 211-219
34. Zuiderweg, E. R. P. Mapping Protein-Protein Interactions in Solution by NMR Spectroscopy Biochemistry 2002, 41, 1-7
35. Calzolai, L.; Franchini, F.; Gilliland, D.; Rossi, F. Protein-Nanoparticle Interaction: Identification of the Ubiquitin-Gold Nanoparticle Interaction Site Nano Lett. 2010, 10, 3101-3103
36. 60 Fullerene Derivatives Acc. Chem. Res. 2000, 33, 695-703
37. Imoto, T.; Forster, L. S.; Rupley, J. A.; Tanaka, F. Fluorescence of Lysozyme: Emissions from Tryptophan Residues 62 and 108 and Energy Migration Proc. Natl. Acad. Sci. U.S.A. 1971, 69, 1151-1155
38. Formoso, C.; Forster, L. S. Tryptophan Fluorescence Lifetimes in Lysozyme J. Biol. Chem. 1975, 250, 3738-3745
39. Yang, Y.; Hamaguchi, K. Hydrolysis of 4-Methylumbelliferyl N-Acetyl-Chitotrioside Catalyzed by Hen and Turkey Lysozymes. pH Dependence of the Kinetics Constants J. Biochem. 1980, 87, 1003-1014
40. Von Dreele, R. B. Binding of N-Acetylglucosamine Oligosaccharides to Hen Egg-White Lysozyme: A Powder Diffraction Study Acta Crystallogr. 2005, D61, 22-32
41. Canevet, D.; Pérez, E. M.; Martín, N. Wraparound Hosts for Fullerenes: Tailored Macrocycles and Cages Angew. Chem., Int. Ed. 2011, 50, 9248-9259
42. Asuri, P.; Bale, S. S.; Pangule, R. C.; Shah, D. A.; Kane, R. S.; Dordick, J. S. Structure, Function, and Stability of Enzymes Covalently Attached to Single-Walled Carbon Nanotubes Langmuir 2007, 23, 12318-12321
43. Calvaresi, M.; Hoefinger, S.; Zerbetto, F. Probing the Structure of Lysozyme-Carbon-Nanotube Hybrids with Molecular Dynamics Chem.-Eur. J. 2012, 18, 4308-4313
44. Goldsmith, B. R.; Mitala, J. J., Jr.; Josue, J.; Castro, A.; Lerner, M. B.; Bayburt, T. H.; Khamis, S. M.; Jones, R. A.; Brand, J. G.; Sligar, S. G. et al. Biomimetic Chemical Sensors Using Nanoelectronic Readout of Olfactory Receptor Proteins ACS Nano 2011, 5, 5408-5416
45. Ali-Boucetta, H.; Nunes, A.; Sainz, R.; Herrero, M. A.; Tian, B.; Prato, M.; Bianco, A.; Kostarelos, K. Asbestos-Like Pathogenicity of Long Carbon Nanotubes Alleviated by Chemical Functionalization Angew. Chem., Int. Ed. 2013, 52, 2274-2278
46. Garrett, D. S.; Seok, Y. J.; Peterkofsky, A.; Clore, G. M.; Gronenborn, A. M. Identification by NMR of the Binding Surface for the Histidine-Containing Phosphocarrier Protein HPr on the N-Terminal Domain of Enzyme I of the Escherichia Coli Phosphotransferase System Biochemistry 1997, 36, 4393-4398